RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 CYP2E1P05181 493 aaPredicted RBP14.42□□□□□ -0.1
SHF-204ENST00000558685 KIF23Q02241 960 aaPredicted RBP14.42□□□□□ -0.1
SHF-204ENST00000558685 SUPT20HL1Q3ZLR7 823 aa14.42□□□□□ -0.1
SHF-204ENST00000558685 HSP90AB4PQ58FF6 505 aa14.42□□□□□ -0.1
SHF-204ENST00000558685 CCDC158Q5M9N0 1113 aa14.42□□□□□ -0.1
SHF-204ENST00000558685 TTC39AQ5SRH9 613 aa14.42□□□□□ -0.1
SHF-204ENST00000558685 SPTY2D1Q68D10 685 aaPredicted RBP14.42□□□□□ -0.1
SHF-204ENST00000558685 ERICH6Q7L0X2 663 aa14.42□□□□□ -0.1
SHF-204ENST00000558685 NSUN4Q96CB9 384 aaKnown RBP14.42□□□□□ -0.1
SHF-204ENST00000558685 FAM198AQ9UFP1 575 aa14.42□□□□□ -0.1
SHF-204ENST00000558685 PCDHB15Q9Y5E8 787 aa14.42□□□□□ -0.1
SHF-204ENST00000558685 ZAP70P43403 619 aa14.41□□□□□ -0.1
SHF-204ENST00000558685 COL13A1Q5TAT6 717 aaPredicted RBP14.41□□□□□ -0.1
SHF-204ENST00000558685 ARMC9Q7Z3E5 817 aa14.41□□□□□ -0.1
SHF-204ENST00000558685 FAM83AQ86UY5 434 aa14.41□□□□□ -0.1
SHF-204ENST00000558685 DZIP1Q86YF9 867 aaKnown RBP14.41□□□□□ -0.1
SHF-204ENST00000558685 ZFPM1Q8IX07 1006 aa14.41□□□□□ -0.1
SHF-204ENST00000558685 KIF1BPQ96EK5 621 aa14.41□□□□□ -0.1
SHF-204ENST00000558685 CLMNQ96JQ2 1002 aa14.41□□□□□ -0.1
SHF-204ENST00000558685 PIH1D3Q9NQM4 214 aaKnown RBP14.41□□□□□ -0.1
SHF-204ENST00000558685 USP40Q9NVE5 1235 aa14.41□□□□□ -0.1
SHF-204ENST00000558685 NDUFB9Q9Y6M9 179 aa14.41□□□□□ -0.1
SHF-204ENST00000558685 RFX7Q2KHR2 1363 aa14.4□□□□□ -0.1
SHF-204ENST00000558685 GPR75-ASB3A0A0A6YYF3 556 aa14.4□□□□□ -0.1
SHF-204ENST00000558685 RAB11FIP3O75154 756 aa14.4□□□□□ -0.1
SHF-204ENST00000558685 RHBDL3P58872 404 aa14.4□□□□□ -0.1
SHF-204ENST00000558685 CSRNP1Q96S65 589 aa14.4□□□□□ -0.1
SHF-204ENST00000558685 CRBNQ96SW2 442 aa14.4□□□□□ -0.1
SHF-204ENST00000558685 MYH2Q9UKX2 1941 aa14.4□□□□□ -0.1
SHF-204ENST00000558685 MROH7-TTC4A0A0A0MT08 1334 aa14.4□□□□□ -0.1
SHF-204ENST00000558685 PPP1R12BO60237 982 aaPredicted RBP14.39□□□□□ -0.11
SHF-204ENST00000558685 WDHD1O75717 1129 aaPredicted RBP14.39□□□□□ -0.11
SHF-204ENST00000558685 HSPA8P11142 646 aaKnown RBP14.39□□□□□ -0.11
SHF-204ENST00000558685 BTDP43251 543 aa14.39□□□□□ -0.11
SHF-204ENST00000558685 TNNI2P48788 182 aa14.39□□□□□ -0.11
SHF-204ENST00000558685 TCP10Q12799 353 aa14.39□□□□□ -0.11
SHF-204ENST00000558685 ADGRA1Q86SQ6 560 aa14.39□□□□□ -0.11
SHF-204ENST00000558685 FAM151AQ8WW52 585 aa14.39□□□□□ -0.11
SHF-204ENST00000558685 ANTXR1Q9H6X2 564 aa14.39□□□□□ -0.11
SHF-204ENST00000558685 TMOD2Q9NZR1 351 aa14.39□□□□□ -0.11
SHF-204ENST00000558685 RAI14Q9P0K7 980 aa14.39□□□□□ -0.11
SHF-204ENST00000558685 SMARCA5O60264 1052 aaPredicted RBP14.38□□□□□ -0.11
SHF-204ENST00000558685 CTCFP49711 727 aaPredicted RBP14.38□□□□□ -0.11
SHF-204ENST00000558685 LBX1P52954 281 aa14.38□□□□□ -0.11
SHF-204ENST00000558685 SPRYD7Q5W111 196 aa14.38□□□□□ -0.11
SHF-204ENST00000558685 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.38□□□□□ -0.11
SHF-204ENST00000558685 SH3BP5LQ7L8J4 393 aa14.38□□□□□ -0.11
SHF-204ENST00000558685 CLASRPQ8N2M8 674 aaKnown RBP14.38□□□□□ -0.11
SHF-204ENST00000558685 AIDAQ96BJ3 306 aa14.38□□□□□ -0.11
SHF-204ENST00000558685 IDI2Q9BXS1 227 aa14.38□□□□□ -0.11
SHF-204ENST00000558685 DCTPP1Q9H773 170 aa14.38□□□□□ -0.11
SHF-204ENST00000558685 DDX4Q9NQI0 724 aaKnown RBP14.38□□□□□ -0.11
SHF-204ENST00000558685 LRP2BPQ9P2M1 347 aa14.38□□□□□ -0.11
SHF-204ENST00000558685 TSKSQ9UJT2 592 aa14.38□□□□□ -0.11
SHF-204ENST00000558685 RPAP1Q9BWH6 1393 aaPredicted RBP14.37□□□□□ -0.11
SHF-204ENST00000558685 GJA5P36382 358 aa14.37□□□□□ -0.11
SHF-204ENST00000558685 RGS3P49796 1198 aa14.37□□□□□ -0.11
SHF-204ENST00000558685 MKRN3Q13064 507 aaKnown RBP14.37□□□□□ -0.11
SHF-204ENST00000558685 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
SHF-204ENST00000558685 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.37□□□□□ -0.11
SHF-204ENST00000558685 SLC10A4Q96EP9 437 aa14.37□□□□□ -0.11
SHF-204ENST00000558685 MYO5AQ9Y4I1 1855 aaKnown RBP14.37□□□□□ -0.11
SHF-204ENST00000558685 UNCXA6NJT0 531 aa14.36□□□□□ -0.11
SHF-204ENST00000558685 SLURP2P0DP57 97 aa14.36□□□□□ -0.11
SHF-204ENST00000558685 IREB2P48200 963 aaKnown RBP14.36□□□□□ -0.11
SHF-204ENST00000558685 GSTO1P78417 241 aa14.36□□□□□ -0.11
SHF-204ENST00000558685 MIGA2Q7L4E1 593 aa14.36□□□□□ -0.11
SHF-204ENST00000558685 BCL11AQ9H165 835 aa14.36□□□□□ -0.11
SHF-204ENST00000558685 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.36□□□□□ -0.11
SHF-204ENST00000558685 ATRNL1Q5VV63 1379 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 ENTPD3O75355 529 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 LDHCP07864 332 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 IFIT2P09913 472 aaKnown RBP14.35□□□□□ -0.11
SHF-204ENST00000558685 MAP3K9P80192 1104 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 VGLL4Q14135 290 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 NAA16Q6N069 864 aaPredicted RBP14.35□□□□□ -0.11
SHF-204ENST00000558685 ANKRD13AQ8IZ07 590 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 WNK4Q96J92 1243 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 LRRCC1Q9C099 1032 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 PRDM10Q9NQV6 1147 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 RNF186Q9NXI6 227 aa14.35□□□□□ -0.11
SHF-204ENST00000558685 OTOFQ9HC10 1997 aa14.34□□□□□ -0.11
SHF-204ENST00000558685 DDTLA6NHG4 134 aaPredicted RBP14.34□□□□□ -0.11
SHF-204ENST00000558685 TM4SF4P48230 202 aa14.34□□□□□ -0.11
SHF-204ENST00000558685 PPP4CP60510 307 aa14.34□□□□□ -0.11
SHF-204ENST00000558685 SH3RF3Q8TEJ3 882 aaPredicted RBP14.34□□□□□ -0.11
SHF-204ENST00000558685 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
SHF-204ENST00000558685 EDC3Q96F86 508 aaKnown RBP14.34□□□□□ -0.11
SHF-204ENST00000558685 BEGAINQ9BUH8 593 aa14.34□□□□□ -0.11
SHF-204ENST00000558685 ELP3Q9H9T3 547 aa14.34□□□□□ -0.11
SHF-204ENST00000558685 CA12O43570 354 aa14.33□□□□□ -0.12
SHF-204ENST00000558685 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
SHF-204ENST00000558685 TRPA1O75762 1119 aa14.33□□□□□ -0.12
SHF-204ENST00000558685 IDH1O75874 414 aaKnown RBP14.33□□□□□ -0.12
SHF-204ENST00000558685 INPP5BP32019 993 aa14.33□□□□□ -0.12
SHF-204ENST00000558685 MAP3K10Q02779 954 aa14.33□□□□□ -0.12
SHF-204ENST00000558685 ZKSCAN4Q969J2 545 aaPredicted RBP14.33□□□□□ -0.12
SHF-204ENST00000558685 AATFQ9NY61 560 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHF-204ENST00000558685 ZNF112Q9UJU3 913 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms