RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 TNFRSF21O75509 655 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 ADH7P40394 386 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 EHHADHQ08426 723 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 PDE3BQ13370 1112 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 ELOA3BQ3SY89 546 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 COL13A1Q5TAT6 717 aaPredicted RBP6.05□□□□□ -1.44
SPG11-211ENST00000558561 NUTM2GQ5VZR2 741 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 HFE2Q6ZVN8 426 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 ELOA3Q8NG57 546 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 OR13H1Q8NG92 308 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 TNFRSF25Q93038 417 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 LRRC59Q96AG4 307 aaKnown RBP6.05□□□□□ -1.44
SPG11-211ENST00000558561 USP32Q8NFA0 1604 aa6.05□□□□□ -1.44
SPG11-211ENST00000558561 J3QW42 95 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 PSAPP07602 524 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 ORC1Q13415 861 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 CCDC27Q2M243 656 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 SVOPQ8N4V2 548 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 ZSCAN1Q8NBB4 408 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 TRPM4Q8TD43 1214 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 BTBD6Q96KE9 485 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 NSUN5Q96P11 429 aaKnown RBP6.04□□□□□ -1.44
SPG11-211ENST00000558561 CHRDQ9H2X0 955 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 SLC6A14Q9UN76 642 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 KNDC1Q76NI1 1749 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 FMN2Q9NZ56 1722 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 PNPLA6Q8IY17 1366 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 JCADQ9P266 1359 aa6.04□□□□□ -1.44
SPG11-211ENST00000558561 NHSL1Q5SYE7 1610 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 LOC102724428A0A0B4J2F2 783 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 PHACTR2O75167 634 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 ARHGEF15O94989 841 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 CES1P23141 567 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 NRLP54845 237 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 SIK1P57059 783 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 PLAURQ03405 335 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 TMCO4Q5TGY1 634 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 C8orf37Q96NL8 207 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 ASB16Q96NS5 453 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 ZFYVE28Q9HCC9 887 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 KANSL3Q9P2N6 904 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 STARD13Q9Y3M8 1113 aa6.03□□□□□ -1.44
SPG11-211ENST00000558561 AHDC1Q5TGY3 1603 aaPredicted RBP6.03□□□□□ -1.44
SPG11-211ENST00000558561 ARHGEF28Q8N1W1 1705 aaKnown RBP6.02□□□□□ -1.45
SPG11-211ENST00000558561 SPATA31A3Q5VYP0 1347 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 DCCP43146 1447 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 EREGO14944 169 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 POLR3DP05423 398 aaPredicted RBP6.02□□□□□ -1.45
SPG11-211ENST00000558561 CPB1P15086 417 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 ALAS2P22557 587 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 SOX18P35713 384 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 GPLD1P80108 840 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 PLCB3Q01970 1234 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 MAP3K10Q02779 954 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 DSC3Q14574 896 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 USPL1Q5W0Q7 1092 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 DNAJC14Q6Y2X3 702 aaPredicted RBP6.02□□□□□ -1.45
SPG11-211ENST00000558561 FAM35AQ86V20 835 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 ZSCAN29Q8IWY8 852 aaPredicted RBP6.02□□□□□ -1.45
SPG11-211ENST00000558561 SNX29Q8TEQ0 813 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 DMRTB1Q96MA1 342 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 LRRC4BQ9NT99 713 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 NAGPAQ9UK23 515 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 PXDNQ92626 1479 aa6.02□□□□□ -1.45
SPG11-211ENST00000558561 AFF2P51816 1311 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 DLC1Q96QB1 1528 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 TRPM1Q7Z4N2 1603 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 ST20-MTHFSA0A0A6YYL1 179 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 ANKRD33BA6NCL7 494 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 FAM83GA6ND36 823 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 PHF20L1A8MW92 1017 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 TREHO43280 583 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 AMPD1P23109 780 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 FBLN1P23142 703 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 INSM1Q01101 510 aaPredicted RBP6.01□□□□□ -1.45
SPG11-211ENST00000558561 HYAL2Q12891 473 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 PERM1Q5SV97 790 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 MEX3CQ5U5Q3 659 aaKnown RBP6.01□□□□□ -1.45
SPG11-211ENST00000558561 NEDD1Q8NHV4 660 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 CARD11Q9BXL7 1154 aa6.01□□□□□ -1.45
SPG11-211ENST00000558561 ACEP12821 1306 aa6□□□□□ -1.45
SPG11-211ENST00000558561 CENPJQ9HC77 1338 aaPredicted RBP6□□□□□ -1.45
SPG11-211ENST00000558561 EIF1AYO14602 144 aaKnown RBP6□□□□□ -1.45
SPG11-211ENST00000558561 HOXD8P13378 290 aaPredicted RBP6□□□□□ -1.45
SPG11-211ENST00000558561 PCSK7Q16549 785 aa6□□□□□ -1.45
SPG11-211ENST00000558561 PSAPL1Q6NUJ1 521 aa6□□□□□ -1.45
SPG11-211ENST00000558561 C8orf86Q6ZUL3 223 aa6□□□□□ -1.45
SPG11-211ENST00000558561 CHSY3Q70JA7 882 aa6□□□□□ -1.45
SPG11-211ENST00000558561 NCAPG2Q86XI2 1143 aa6□□□□□ -1.45
SPG11-211ENST00000558561 NGDNQ8NEJ9 315 aaKnown RBP6□□□□□ -1.45
SPG11-211ENST00000558561 NUDT8Q8WV74 236 aa6□□□□□ -1.45
SPG11-211ENST00000558561 ALKBH8Q96BT7 664 aaKnown RBP6□□□□□ -1.45
SPG11-211ENST00000558561 SLC12A5Q9H2X9 1139 aa6□□□□□ -1.45
SPG11-211ENST00000558561 SALL4Q9UJQ4 1053 aa6□□□□□ -1.45
SPG11-211ENST00000558561 CDC42BPGQ6DT37 1551 aa6□□□□□ -1.45
SPG11-211ENST00000558561 SPATA31A6Q5VVP1 1343 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 NPHP3Q7Z494 1330 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 LAMC1P11047 1609 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 KIAA1210Q9ULL0 1709 aa5.99□□□□□ -1.45
SPG11-211ENST00000558561 SHPRHQ149N8 1683 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms