RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 TLL2Q9Y6L7 1015 aa15.05■□□□□ -0
SMAD3-205ENST00000558428 CNTNAP1P78357 1384 aa15.04■□□□□ -0
SMAD3-205ENST00000558428 IGHDP01880 384 aa15.04■□□□□ -0
SMAD3-205ENST00000558428 BTDP43251 543 aa15.04■□□□□ -0
SMAD3-205ENST00000558428 TTF1Q15361 905 aaPredicted RBP15.04■□□□□ -0
SMAD3-205ENST00000558428 SAPCD2Q86UD0 394 aa15.04■□□□□ -0
SMAD3-205ENST00000558428 DNAJC5GQ8N7S2 189 aa15.04■□□□□ -0
SMAD3-205ENST00000558428 ECHDC1Q9NTX5 307 aa15.04■□□□□ -0
SMAD3-205ENST00000558428 PAPPA2Q9BXP8 1791 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 GPR75-ASB3A0A0A6YYF3 556 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 RASSF10A6NK89 507 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 GOLIM4O00461 696 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 IGSF3O75054 1194 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 MAP3K12Q12852 859 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 TTLL12Q14166 644 aaPredicted RBP15.03■□□□□ -0
SMAD3-205ENST00000558428 DEFB115Q30KQ5 88 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 FKBP1CQ5VVH2 108 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 KLRG1Q96E93 195 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 HAUS7Q99871 368 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 PCNTO95613 3336 aa15.03■□□□□ -0
SMAD3-205ENST00000558428 HUNKP57058 714 aa15.02■□□□□ -0
SMAD3-205ENST00000558428 SUPT20HL1Q3ZLR7 823 aa15.02■□□□□ -0
SMAD3-205ENST00000558428 NBPF12Q5TAG4 269 aaPredicted RBP15.02■□□□□ -0
SMAD3-205ENST00000558428 TSHZ3Q63HK5 1081 aa15.02■□□□□ -0
SMAD3-205ENST00000558428 PAXIP1Q6ZW49 1069 aaPredicted RBP15.02■□□□□ -0
SMAD3-205ENST00000558428 FAM83AQ86UY5 434 aa15.02■□□□□ -0
SMAD3-205ENST00000558428 SMC5Q8IY18 1101 aa15.02■□□□□ -0
SMAD3-205ENST00000558428 OTUD7AQ8TE49 926 aaPredicted RBP15.02■□□□□ -0
SMAD3-205ENST00000558428 EDC3Q96F86 508 aaKnown RBP15.02■□□□□ -0
SMAD3-205ENST00000558428 NOL10Q9BSC4 688 aaKnown RBP15.02■□□□□ -0
SMAD3-205ENST00000558428 TMEM39BQ9GZU3 492 aa15.02■□□□□ -0
SMAD3-205ENST00000558428 PAG1Q9NWQ8 432 aa15.02■□□□□ -0
SMAD3-205ENST00000558428 MYH7P12883 1935 aa15.02□□□□□ -0.01
SMAD3-205ENST00000558428 CYP7A1P22680 504 aa15.01□□□□□ -0.01
SMAD3-205ENST00000558428 FKBP1BP68106 108 aa15.01□□□□□ -0.01
SMAD3-205ENST00000558428 TCP10Q12799 353 aa15.01□□□□□ -0.01
SMAD3-205ENST00000558428 NFIAQ12857 509 aa15.01□□□□□ -0.01
SMAD3-205ENST00000558428 PRKG1Q13976 671 aa15.01□□□□□ -0.01
SMAD3-205ENST00000558428 B4GALNT3Q6L9W6 998 aa15.01□□□□□ -0.01
SMAD3-205ENST00000558428 MAGEB6Q8N7X4 407 aa15.01□□□□□ -0.01
SMAD3-205ENST00000558428 TTC41PQ6P2S7 1318 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 SSC5DA1L4H1 1573 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 BAG3O95817 575 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 CENPBP07199 599 aaPredicted RBP15□□□□□ -0.01
SMAD3-205ENST00000558428 MX1P20591 662 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 RHBDL3P58872 404 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 GRM1Q13255 1194 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 MOB2Q70IA6 237 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 ARMC9Q7Z3E5 817 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 ADGRA1Q86SQ6 560 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 CDAN1Q8IWY9 1227 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 HHIPL1Q96JK4 782 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 TEPSINQ96N21 525 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 IDI2Q9BXS1 227 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 LNPKQ9C0E8 428 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 AATFQ9NY61 560 aaKnown RBP eCLIP15□□□□□ -0.01
SMAD3-205ENST00000558428 FAM198AQ9UFP1 575 aa15□□□□□ -0.01
SMAD3-205ENST00000558428 UBE2Q2LH0YL09 131 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 ERC2O15083 957 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 PPP1R12BO60237 982 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-205ENST00000558428 MAP4K4O95819 1239 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-205ENST00000558428 ECE1P42892 770 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 VEGFBP49765 207 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 RGS3P49796 1198 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 SLC9C2Q5TAH2 1124 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 CYP4F22Q6NT55 531 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 TMED8Q6PL24 325 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-205ENST00000558428 FAM151AQ8WW52 585 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 CAPNS2Q96L46 248 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 ANGEL1Q9UNK9 670 aaKnown RBP14.99□□□□□ -0.01
SMAD3-205ENST00000558428 FZD1Q9UP38 647 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 CDK5RAP2Q96SN8 1893 aa14.99□□□□□ -0.01
SMAD3-205ENST00000558428 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
SMAD3-205ENST00000558428 RPAP1Q9BWH6 1393 aaPredicted RBP14.98□□□□□ -0.01
SMAD3-205ENST00000558428 SALL3Q9BXA9 1300 aa14.98□□□□□ -0.01
SMAD3-205ENST00000558428 ENTPD3O75355 529 aa14.98□□□□□ -0.01
SMAD3-205ENST00000558428 WDHD1O75717 1129 aaPredicted RBP14.98□□□□□ -0.01
SMAD3-205ENST00000558428 GLRX3O76003 335 aaKnown RBP14.98□□□□□ -0.01
SMAD3-205ENST00000558428 PDE6AP16499 860 aa14.98□□□□□ -0.01
SMAD3-205ENST00000558428 PLCG2P16885 1265 aa14.98□□□□□ -0.01
SMAD3-205ENST00000558428 PICALMQ13492 652 aa14.98□□□□□ -0.01
SMAD3-205ENST00000558428 RGMBQ6NW40 437 aa14.98□□□□□ -0.01
SMAD3-205ENST00000558428 CHD1LQ86WJ1 897 aa14.98□□□□□ -0.01
SMAD3-205ENST00000558428 TEX11Q8IYF3 940 aa14.98□□□□□ -0.01
SMAD3-205ENST00000558428 SH3RF3Q8TEJ3 882 aaPredicted RBP14.98□□□□□ -0.01
SMAD3-205ENST00000558428 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMAD3-205ENST00000558428 DDX4Q9NQI0 724 aaKnown RBP14.98□□□□□ -0.01
SMAD3-205ENST00000558428 WDR33Q9C0J8 1336 aaKnown RBP14.97□□□□□ -0.01
SMAD3-205ENST00000558428 ZNF157P51786 506 aaPredicted RBP14.97□□□□□ -0.01
SMAD3-205ENST00000558428 PPP4CP60510 307 aa14.97□□□□□ -0.01
SMAD3-205ENST00000558428 DYNLL1P63167 89 aaKnown RBP14.97□□□□□ -0.01
SMAD3-205ENST00000558428 NUCB1Q02818 461 aa14.97□□□□□ -0.01
SMAD3-205ENST00000558428 MIGA1Q8NAN2 632 aa14.97□□□□□ -0.01
SMAD3-205ENST00000558428 PI4K2BQ8TCG2 481 aa14.97□□□□□ -0.01
SMAD3-205ENST00000558428 FOCADQ5VW36 1801 aa14.96□□□□□ -0.01
SMAD3-205ENST00000558428 ZNF532Q9HCE3 1301 aa14.96□□□□□ -0.01
SMAD3-205ENST00000558428 USP2O75604 605 aaPredicted RBP14.96□□□□□ -0.01
SMAD3-205ENST00000558428 IREB2P48200 963 aaKnown RBP14.96□□□□□ -0.01
SMAD3-205ENST00000558428 MAP3K11Q16584 847 aa14.96□□□□□ -0.01
SMAD3-205ENST00000558428 ZSCAN29Q8IWY8 852 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms