RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 SAGE1Q9NXZ1 904 aa12.58□□□□□ -0.4
TPM1-212ENST00000558347 MAST3O60307 1309 aa12.58□□□□□ -0.4
TPM1-212ENST00000558347 PPP1R12BO60237 982 aaPredicted RBP12.57□□□□□ -0.4
TPM1-212ENST00000558347 USP2O75604 605 aaPredicted RBP12.57□□□□□ -0.4
TPM1-212ENST00000558347 POLA2Q14181 598 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 HHIPL2Q6UWX4 724 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 SMC5Q8IY18 1101 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 XAGE2Q96GT9 111 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 CLMNQ96JQ2 1002 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.57□□□□□ -0.4
TPM1-212ENST00000558347 DENND2AQ9ULE3 1009 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 SALL1Q9NSC2 1324 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 SEMA3EO15041 775 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 ATP8B2P98198 1209 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 DIXDC1Q155Q3 683 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 SPRYD7Q5W111 196 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 REM2Q8IYK8 340 aaPredicted RBP12.57□□□□□ -0.4
TPM1-212ENST00000558347 AKAP2Q9Y2D5 859 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 DAGLAQ9Y4D2 1042 aa12.57□□□□□ -0.4
TPM1-212ENST00000558347 ZBTB22O15209 634 aa12.56□□□□□ -0.4
TPM1-212ENST00000558347 HMMRO75330 724 aa12.56□□□□□ -0.4
TPM1-212ENST00000558347 LDHBP07195 334 aaKnown RBP12.56□□□□□ -0.4
TPM1-212ENST00000558347 TNNI2P48788 182 aa12.56□□□□□ -0.4
TPM1-212ENST00000558347 G3BP1Q13283 466 aaKnown RBP eCLIP12.56□□□□□ -0.4
TPM1-212ENST00000558347 SSH3Q8TE77 659 aa12.56□□□□□ -0.4
TPM1-212ENST00000558347 GCC1Q96CN9 775 aa12.56□□□□□ -0.4
TPM1-212ENST00000558347 NEUROD6Q96NK8 337 aa12.56□□□□□ -0.4
TPM1-212ENST00000558347 LAMB1P07942 1786 aa12.55□□□□□ -0.4
TPM1-212ENST00000558347 IREB2P48200 963 aaKnown RBP12.55□□□□□ -0.4
TPM1-212ENST00000558347 TM4SF4P48230 202 aa12.55□□□□□ -0.4
TPM1-212ENST00000558347 SLC10A4Q96EP9 437 aa12.55□□□□□ -0.4
TPM1-212ENST00000558347 MYH2Q9UKX2 1941 aa12.54□□□□□ -0.4
TPM1-212ENST00000558347 PDS5AQ29RF7 1337 aaKnown RBP12.54□□□□□ -0.4
TPM1-212ENST00000558347 UNCXA6NJT0 531 aa12.54□□□□□ -0.4
TPM1-212ENST00000558347 GJA5P36382 358 aa12.54□□□□□ -0.4
TPM1-212ENST00000558347 BECN1Q14457 450 aa12.54□□□□□ -0.4
TPM1-212ENST00000558347 PI16Q6UXB8 463 aa12.54□□□□□ -0.4
TPM1-212ENST00000558347 ANKRD13AQ8IZ07 590 aa12.54□□□□□ -0.4
TPM1-212ENST00000558347 WNK4Q96J92 1243 aa12.54□□□□□ -0.4
TPM1-212ENST00000558347 DCTPP1Q9H773 170 aa12.54□□□□□ -0.4
TPM1-212ENST00000558347 TMOD2Q9NZR1 351 aa12.54□□□□□ -0.4
TPM1-212ENST00000558347 FKBP1CQ5VVH2 108 aa12.53□□□□□ -0.4
TPM1-212ENST00000558347 CDC42EP5Q6NZY7 148 aa12.53□□□□□ -0.4
TPM1-212ENST00000558347 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
TPM1-212ENST00000558347 FAM83AQ86UY5 434 aa12.53□□□□□ -0.4
TPM1-212ENST00000558347 ABHD8Q96I13 439 aa12.53□□□□□ -0.4
TPM1-212ENST00000558347 UPF2Q9HAU5 1272 aaKnown RBP12.53□□□□□ -0.4
TPM1-212ENST00000558347 HMG20BQ9P0W2 317 aa12.53□□□□□ -0.4
TPM1-212ENST00000558347 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
TPM1-212ENST00000558347 SURF6O75683 361 aaKnown RBP12.52□□□□□ -0.4
TPM1-212ENST00000558347 TBC1D8O95759 1140 aa12.52□□□□□ -0.4
TPM1-212ENST00000558347 ZBTB48P10074 688 aaPredicted RBP12.52□□□□□ -0.4
TPM1-212ENST00000558347 ARID4AP29374 1257 aaPredicted RBP12.52□□□□□ -0.4
TPM1-212ENST00000558347 SREBF2Q12772 1141 aa12.52□□□□□ -0.4
TPM1-212ENST00000558347 NFIAQ12857 509 aa12.52□□□□□ -0.4
TPM1-212ENST00000558347 ZGPATQ8N5A5 531 aaKnown RBP12.52□□□□□ -0.4
TPM1-212ENST00000558347 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.52□□□□□ -0.4
TPM1-212ENST00000558347 MCOLN1Q9GZU1 580 aa12.52□□□□□ -0.4
TPM1-212ENST00000558347 ELP3Q9H9T3 547 aa12.52□□□□□ -0.4
TPM1-212ENST00000558347 RPAP1Q9BWH6 1393 aaPredicted RBP12.52□□□□□ -0.41
TPM1-212ENST00000558347 MCAMP43121 646 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 OS9Q13438 667 aaPredicted RBP12.52□□□□□ -0.41
TPM1-212ENST00000558347 VGLL4Q14135 290 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 NFKBIBQ15653 356 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 TNNI3KQ59H18 835 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 GORABQ5T7V8 394 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 SPATA5Q8NB90 893 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 ZNF384Q8TF68 577 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 FAM151AQ8WW52 585 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 OPTNQ96CV9 577 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 GPR108Q9NPR9 543 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 USP40Q9NVE5 1235 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 FAM198AQ9UFP1 575 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 FPGT-TNNI3KV9GXZ4 949 aa12.52□□□□□ -0.41
TPM1-212ENST00000558347 GAKO14976 1311 aa12.51□□□□□ -0.41
TPM1-212ENST00000558347 MANSC4A6NHS7 340 aaPredicted RBP12.51□□□□□ -0.41
TPM1-212ENST00000558347 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
TPM1-212ENST00000558347 TCP10Q12799 353 aa12.51□□□□□ -0.41
TPM1-212ENST00000558347 DGKZQ13574 1117 aa12.51□□□□□ -0.41
TPM1-212ENST00000558347 TBC1D9Q6ZT07 1266 aa12.51□□□□□ -0.41
TPM1-212ENST00000558347 DZIP1Q86YF9 867 aaKnown RBP12.51□□□□□ -0.41
TPM1-212ENST00000558347 DBNDD2Q9BQY9 259 aa12.51□□□□□ -0.41
TPM1-212ENST00000558347 R3HDMLQ9H3Y0 253 aa12.51□□□□□ -0.41
TPM1-212ENST00000558347 IGF2BP3O00425 579 aaKnown RBP eCLIP12.5□□□□□ -0.41
TPM1-212ENST00000558347 NUCB1Q02818 461 aa12.5□□□□□ -0.41
TPM1-212ENST00000558347 MECOMQ03112 1051 aa12.5□□□□□ -0.41
TPM1-212ENST00000558347 SPTY2D1Q68D10 685 aaPredicted RBP12.5□□□□□ -0.41
TPM1-212ENST00000558347 IFNL1Q8IU54 200 aa12.5□□□□□ -0.41
TPM1-212ENST00000558347 ZFPM1Q8IX07 1006 aa12.5□□□□□ -0.41
TPM1-212ENST00000558347 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
TPM1-212ENST00000558347 RFX7Q2KHR2 1363 aa12.5□□□□□ -0.41
TPM1-212ENST00000558347 BTDP43251 543 aa12.49□□□□□ -0.41
TPM1-212ENST00000558347 INHBEP58166 350 aa12.49□□□□□ -0.41
TPM1-212ENST00000558347 MIGA2Q7L4E1 593 aa12.49□□□□□ -0.41
TPM1-212ENST00000558347 ZNF296Q8WUU4 475 aaPredicted RBP12.49□□□□□ -0.41
TPM1-212ENST00000558347 ZKSCAN4Q969J2 545 aaPredicted RBP12.49□□□□□ -0.41
TPM1-212ENST00000558347 FAM163AQ96GL9 167 aaPredicted RBP12.49□□□□□ -0.41
TPM1-212ENST00000558347 TBC1D32Q96NH3 1257 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms