RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 KRT23Q9C075 422 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 LRRC27Q9C0I9 530 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 HMG20BQ9P0W2 317 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 TNNC1P63316 161 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 ZNF594Q96JF6 807 aaPredicted RBP15.66■□□□□ 0.1
SPG11-210ENST00000558319 HAUS7Q99871 368 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 VCX3BQ9H321 246 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 SWAP70Q9UH65 585 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 IRS4O14654 1257 aaPredicted RBP15.66■□□□□ 0.1
SPG11-210ENST00000558319 MCMDC2Q4G0Z9 681 aa15.66■□□□□ 0.1
SPG11-210ENST00000558319 PTPRCP08575 1304 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 VWA3AA6NCI4 1184 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 MAP2K2P36507 400 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 C8orf34Q49A92 452 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 C6orf50Q9HD87 102 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 PIK3R4Q99570 1358 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 DISP3Q9P2K9 1392 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 TAF5LO75529 589 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 IMPG2Q9BZV3 1241 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 BAIAP2L1Q9UHR4 511 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 FAM169AQ9Y6X4 670 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 FAM135AQ9P2D6 1515 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 KRT2P35908 639 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 SPAG1Q07617 926 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 LRRC43Q8N309 656 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.65■□□□□ 0.1
SPG11-210ENST00000558319 ESYT1Q9BSJ8 1104 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 ABCC5O15440 1437 aa15.65■□□□□ 0.1
SPG11-210ENST00000558319 SUPT6HQ7KZ85 1726 aaKnown RBP15.64■□□□□ 0.09
SPG11-210ENST00000558319 CD109Q6YHK3 1445 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 PTPDC1A2A3K4 754 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 GCKP35557 465 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 GABPAQ06546 454 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 BIRC3Q13489 604 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 MAK16Q9BXY0 300 aaKnown RBP15.64■□□□□ 0.09
SPG11-210ENST00000558319 AKR1B15C9JRZ8 316 aaPredicted RBP15.64■□□□□ 0.09
SPG11-210ENST00000558319 PEX19P40855 299 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 VPS52Q8N1B4 723 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 JDP2Q8WYK2 163 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 GDAP1L1Q96MZ0 367 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 BICC1Q9H694 974 aaKnown RBP15.64■□□□□ 0.09
SPG11-210ENST00000558319 E7EVH7 732 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 PTPROQ16827 1216 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 CCDC110Q8TBZ0 833 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 PSMB7Q99436 277 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 PFDN4Q9NQP4 134 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 NOD1Q9Y239 953 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 RTCBQ9Y3I0 505 aaKnown RBP15.64■□□□□ 0.09
SPG11-210ENST00000558319 EHBP1L1Q8N3D4 1523 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 UQCRFS1P1P0C7P4 283 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 CALCOCO2Q13137 446 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 MCUR1Q96AQ8 359 aa15.64■□□□□ 0.09
SPG11-210ENST00000558319 A0A1B0GVL5 298 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 NBPF7P0C2Y1 421 aaPredicted RBP15.63■□□□□ 0.09
SPG11-210ENST00000558319 HS1BP3Q53T59 392 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 PRDM1O75626 825 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 SPOUT1Q5T280 376 aaKnown RBP15.63■□□□□ 0.09
SPG11-210ENST00000558319 MYL10Q9BUA6 226 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 DDX21Q9NR30 783 aaKnown RBP eCLIP15.63■□□□□ 0.09
SPG11-210ENST00000558319 AGTPBP1Q9UPW5 1226 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 PCDHB15Q9Y5E8 787 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 PLEKHH2Q8IVE3 1493 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 CCNT1O60563 726 aaKnown RBP15.63■□□□□ 0.09
SPG11-210ENST00000558319 TUBB4AP04350 444 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 GSDMBQ8TAX9 411 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 ARMT1Q9H993 441 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 GRM8O00222 908 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 CPXCR1Q8N123 301 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 FAM89AQ96GI7 184 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 ALDH3A1P30838 453 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 AK2P54819 239 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 NCBP1Q09161 790 aaKnown RBP15.63■□□□□ 0.09
SPG11-210ENST00000558319 FYB2Q5VWT5 728 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 MICAL1Q8TDZ2 1067 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 WHAMMQ8TF30 809 aa15.63■□□□□ 0.09
SPG11-210ENST00000558319 NAPGQ99747 312 aaPredicted RBP15.63■□□□□ 0.09
SPG11-210ENST00000558319 GMNNO75496 209 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 ATP2A2P16615 1042 aaKnown RBP15.62■□□□□ 0.09
SPG11-210ENST00000558319 TSNAXIP1Q2TAA8 658 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 MGARPQ8TDB4 240 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 VPS16Q9H269 839 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 CAMSAP2Q08AD1 1489 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 C8orf74Q6P047 294 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 SDCCAG8Q86SQ7 713 aaPredicted RBP15.62■□□□□ 0.09
SPG11-210ENST00000558319 TSGA10Q9BZW7 698 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 TPX2Q9ULW0 747 aaKnown RBP15.62■□□□□ 0.09
SPG11-210ENST00000558319 USTQ9Y2C2 406 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 HECW1Q76N89 1606 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 SATB1Q01826 763 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 TSPYL6Q8N831 410 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 IFRD2Q12894 506 aaPredicted RBP15.62■□□□□ 0.09
SPG11-210ENST00000558319 LDHBP07195 334 aaKnown RBP15.62■□□□□ 0.09
SPG11-210ENST00000558319 POLD1P28340 1107 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 VSIG1Q86XK7 387 aa15.62■□□□□ 0.09
SPG11-210ENST00000558319 B4E1Z4 1266 aa15.61■□□□□ 0.09
SPG11-210ENST00000558319 SEC24BO95487 1268 aa15.61■□□□□ 0.09
SPG11-210ENST00000558319 SEL1L2Q5TEA6 688 aa15.61■□□□□ 0.09
SPG11-210ENST00000558319 MYRIPQ8NFW9 859 aa15.61■□□□□ 0.09
SPG11-210ENST00000558319 NUF2Q9BZD4 464 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms