RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.61□□□□□ -1.35
SPG11-208ENST00000558155 TEPSINQ96N21 525 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 ARHGAP39Q9C0H5 1083 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 RNF208Q9H0X6 261 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 MYH16Q9H6N6 1097 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 TDRD3Q9H7E2 651 aaKnown RBP6.61□□□□□ -1.35
SPG11-208ENST00000558155 SRRDQ9UH36 339 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 TTF2Q9UNY4 1162 aaKnown RBP6.61□□□□□ -1.35
SPG11-208ENST00000558155 ZNF646O15015 1829 aaPredicted RBP6.61□□□□□ -1.35
SPG11-208ENST00000558155 SPEF2Q9C093 1822 aa6.61□□□□□ -1.35
SPG11-208ENST00000558155 FAM205AQ6ZU69 1335 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 FAM205CA6NFA0 338 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 SPDYE5A6NIY4 337 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 SNAP23O00161 211 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 ZBTB7BO15156 539 aaPredicted RBP6.6□□□□□ -1.35
SPG11-208ENST00000558155 PLIN1O60240 522 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 CCL5P13501 91 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 HIBADHP31937 336 aaKnown RBP6.6□□□□□ -1.35
SPG11-208ENST00000558155 MTFR1Q15390 333 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 MFSD14BQ5SR56 506 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 C17orf99Q6UX52 265 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 TDRD7Q8NHU6 1098 aaKnown RBP6.6□□□□□ -1.35
SPG11-208ENST00000558155 TMEM39BQ9GZU3 492 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 JAG2Q9Y219 1238 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 CHMP3Q9Y3E7 222 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 CEP290O15078 2479 aa6.6□□□□□ -1.35
SPG11-208ENST00000558155 AOX1Q06278 1338 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 MYBBP1AQ9BQG0 1328 aaKnown RBP6.59□□□□□ -1.35
SPG11-208ENST00000558155 IRS2Q9Y4H2 1338 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 APAF1O14727 1248 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 IRF6O14896 467 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 EVI5O60447 810 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 ECM2O94769 699 aaPredicted RBP6.59□□□□□ -1.35
SPG11-208ENST00000558155 SGPL1O95470 568 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 TFRCP02786 760 aaKnown RBP6.59□□□□□ -1.35
SPG11-208ENST00000558155 OSBPP22059 807 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 CRKP46108 304 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 HDLBPQ00341 1268 aaKnown RBP6.59□□□□□ -1.35
SPG11-208ENST00000558155 PPATQ06203 517 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 PPIL2Q13356 520 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 UBE4AQ14139 1066 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 CCDC57Q2TAC2 916 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 TAF7LQ5H9L4 462 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 DCAF15Q66K64 600 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 LDHAL6AQ6ZMR3 332 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 UBE2Q1Q7Z7E8 422 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 ANKRD23Q86SG2 305 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 LINS1Q8NG48 757 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 SHISA4Q96DD7 197 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 MRIQ9BWK5 157 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 PRO3102Q9H379 93 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 CNNM1Q9NRU3 951 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 TMOD2Q9NZR1 351 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 CPA4Q9UI42 421 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 RIPOR2Q9Y4F9 1068 aa6.59□□□□□ -1.35
SPG11-208ENST00000558155 MYPNQ86TC9 1320 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 FARP2O94887 1054 aaPredicted RBP6.58□□□□□ -1.36
SPG11-208ENST00000558155 HOXB3P14651 431 aaPredicted RBP6.58□□□□□ -1.36
SPG11-208ENST00000558155 CASP7P55210 303 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 FCGRTP55899 365 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 FKBP1CQ5VVH2 108 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 GPR153Q6NV75 609 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 G2E3Q7L622 706 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 FAM83AQ86UY5 434 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 VPS37DQ86XT2 251 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 TSPYL6Q8N831 410 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 U2AF1L4Q8WU68 220 aaKnown RBP6.58□□□□□ -1.36
SPG11-208ENST00000558155 TBC1D22AQ8WUA7 517 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 DNAAF4Q8WXU2 420 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 ZKSCAN4Q969J2 545 aaPredicted RBP6.58□□□□□ -1.36
SPG11-208ENST00000558155 FAM84BQ96KN1 310 aaPredicted RBP6.58□□□□□ -1.36
SPG11-208ENST00000558155 WRNIP1Q96S55 665 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 ZNF341Q9BYN7 854 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 STAP2Q9UGK3 403 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 SNCAIPQ9Y6H5 919 aa6.58□□□□□ -1.36
SPG11-208ENST00000558155 PDHXO00330 501 aa6.57□□□□□ -1.36
SPG11-208ENST00000558155 FRAT2O75474 233 aaPredicted RBP6.57□□□□□ -1.36
SPG11-208ENST00000558155 CTGFP29279 349 aa6.57□□□□□ -1.36
SPG11-208ENST00000558155 BMP8BP34820 402 aa6.57□□□□□ -1.36
SPG11-208ENST00000558155 GYG1P46976 350 aa6.57□□□□□ -1.36
SPG11-208ENST00000558155 FOXO4P98177 505 aa6.57□□□□□ -1.36
SPG11-208ENST00000558155 FKBP5Q13451 457 aaPredicted RBP6.57□□□□□ -1.36
SPG11-208ENST00000558155 TWISTNBQ3B726 338 aaPredicted RBP6.57□□□□□ -1.36
SPG11-208ENST00000558155 LMBR1LQ6UX01 489 aa6.57□□□□□ -1.36
SPG11-208ENST00000558155 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.57□□□□□ -1.36
SPG11-208ENST00000558155 TEKT1Q969V4 418 aa6.57□□□□□ -1.36
SPG11-208ENST00000558155 SOX1O00570 391 aaPredicted RBP6.56□□□□□ -1.36
SPG11-208ENST00000558155 CXCL11O14625 94 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 ADCY3O60266 1144 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 PSEN1P49768 467 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 PRKCZQ05513 592 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 FLIIQ13045 1269 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 CAVIN4Q5BKX8 364 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 MIGA2Q7L4E1 593 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 FASTKD5Q7L8L6 764 aaKnown RBP6.56□□□□□ -1.36
SPG11-208ENST00000558155 NECAB2Q7Z6G3 386 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 ZNF467Q7Z7K2 595 aaPredicted RBP6.56□□□□□ -1.36
SPG11-208ENST00000558155 PXYLP1Q8TE99 480 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 LRCH3Q96II8 777 aa6.56□□□□□ -1.36
SPG11-208ENST00000558155 ZNF594Q96JF6 807 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms