RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 MRE11P49959 708 aa17.16■□□□□ 0.34
TMEM260-215ENST00000557626 CNGB1Q14028 1251 aaPredicted RBP17.16■□□□□ 0.34
TMEM260-215ENST00000557626 TMEM31Q5JXX7 168 aa17.16■□□□□ 0.34
TMEM260-215ENST00000557626 C9orf50Q5SZB4 431 aa17.16■□□□□ 0.34
TMEM260-215ENST00000557626 PRKAG2Q9UGJ0 569 aa17.16■□□□□ 0.34
TMEM260-215ENST00000557626 KCNH4Q9UQ05 1017 aa17.16■□□□□ 0.34
TMEM260-215ENST00000557626 TCF20Q9UGU0 1960 aaKnown RBP17.16■□□□□ 0.34
TMEM260-215ENST00000557626 MOGSQ13724 837 aa17.15■□□□□ 0.34
TMEM260-215ENST00000557626 GRIN2CQ14957 1233 aa17.15■□□□□ 0.34
TMEM260-215ENST00000557626 FKBP1AP62942 108 aaKnown RBP17.14■□□□□ 0.33
TMEM260-215ENST00000557626 NECAB3Q96P71 396 aaPredicted RBP17.14■□□□□ 0.33
TMEM260-215ENST00000557626 CHPF2Q9P2E5 772 aa17.14■□□□□ 0.33
TMEM260-215ENST00000557626 NEFMP07197 916 aa17.13■□□□□ 0.33
TMEM260-215ENST00000557626 KCNJ4P48050 445 aa17.13■□□□□ 0.33
TMEM260-215ENST00000557626 TRIM32Q13049 653 aa17.13■□□□□ 0.33
TMEM260-215ENST00000557626 PCCAP05165 728 aaPredicted RBP17.12■□□□□ 0.33
TMEM260-215ENST00000557626 GPAT2Q6NUI2 795 aa17.12■□□□□ 0.33
TMEM260-215ENST00000557626 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
TMEM260-215ENST00000557626 MYH3P11055 1940 aa17.11■□□□□ 0.33
TMEM260-215ENST00000557626 RIC3Q7Z5B4 369 aa17.11■□□□□ 0.33
TMEM260-215ENST00000557626 JARID2Q92833 1246 aaPredicted RBP17.11■□□□□ 0.33
TMEM260-215ENST00000557626 HOOK2Q96ED9 719 aa17.11■□□□□ 0.33
TMEM260-215ENST00000557626 ANKRD2Q9GZV1 360 aa17.11■□□□□ 0.33
TMEM260-215ENST00000557626 EPHX3Q9H6B9 360 aa17.11■□□□□ 0.33
TMEM260-215ENST00000557626 SERPINA10Q9UK55 444 aa17.11■□□□□ 0.33
TMEM260-215ENST00000557626 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
TMEM260-215ENST00000557626 PER1O15534 1290 aaPredicted RBP17.1■□□□□ 0.33
TMEM260-215ENST00000557626 INPP5BP32019 993 aa17.1■□□□□ 0.33
TMEM260-215ENST00000557626 CTSWP56202 376 aa17.1■□□□□ 0.33
TMEM260-215ENST00000557626 DCAF15Q66K64 600 aa17.1■□□□□ 0.33
TMEM260-215ENST00000557626 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
TMEM260-215ENST00000557626 SMCR8Q8TEV9 937 aaPredicted RBP17.1■□□□□ 0.33
TMEM260-215ENST00000557626 GAS2L1Q99501 681 aaPredicted RBP17.1■□□□□ 0.33
TMEM260-215ENST00000557626 MYO9BQ13459 2157 aa17.1■□□□□ 0.33
TMEM260-215ENST00000557626 AK9Q5TCS8 1911 aa17.09■□□□□ 0.33
TMEM260-215ENST00000557626 PDE3AQ14432 1141 aa17.09■□□□□ 0.33
TMEM260-215ENST00000557626 POTEEQ6S8J3 1075 aa17.09■□□□□ 0.33
TMEM260-215ENST00000557626 GREM2Q9H772 168 aa17.09■□□□□ 0.33
TMEM260-215ENST00000557626 REV3LO60673 3130 aa17.09■□□□□ 0.33
TMEM260-215ENST00000557626 IGHMBP2P38935 993 aaKnown RBP17.08■□□□□ 0.32
TMEM260-215ENST00000557626 AKNAD1Q5T1N1 836 aa17.08■□□□□ 0.32
TMEM260-215ENST00000557626 ZNF341Q9BYN7 854 aa17.08■□□□□ 0.32
TMEM260-215ENST00000557626 TTF2Q9UNY4 1162 aaKnown RBP17.08■□□□□ 0.32
TMEM260-215ENST00000557626 PRKAR2AP13861 404 aaKnown RBP17.07■□□□□ 0.32
TMEM260-215ENST00000557626 IL1R1P14778 569 aa17.07■□□□□ 0.32
TMEM260-215ENST00000557626 ZNF804AQ7Z570 1209 aa17.07■□□□□ 0.32
TMEM260-215ENST00000557626 CCDC191Q8NCU4 936 aa17.07■□□□□ 0.32
TMEM260-215ENST00000557626 DNAJB2P25686 324 aa17.06■□□□□ 0.32
TMEM260-215ENST00000557626 NFE2L2Q16236 605 aa17.06■□□□□ 0.32
TMEM260-215ENST00000557626 FASTKD5Q7L8L6 764 aaKnown RBP17.06■□□□□ 0.32
TMEM260-215ENST00000557626 ANKRD13CQ8N6S4 541 aa17.06■□□□□ 0.32
TMEM260-215ENST00000557626 TTLL11Q8NHH1 800 aa17.06■□□□□ 0.32
TMEM260-215ENST00000557626 MYD88Q99836 296 aa17.06■□□□□ 0.32
TMEM260-215ENST00000557626 SENP6Q9GZR1 1112 aaPredicted RBP17.06■□□□□ 0.32
TMEM260-215ENST00000557626 ZNF576Q9H609 170 aa17.06■□□□□ 0.32
TMEM260-215ENST00000557626 WDFY4Q6ZS81 3184 aa17.05■□□□□ 0.32
TMEM260-215ENST00000557626 CXCL11O14625 94 aa17.05■□□□□ 0.32
TMEM260-215ENST00000557626 CACNB3P54284 484 aa17.05■□□□□ 0.32
TMEM260-215ENST00000557626 MAP3K21Q5TCX8 1036 aa17.05■□□□□ 0.32
TMEM260-215ENST00000557626 HDGFL1Q5TGJ6 251 aa17.05■□□□□ 0.32
TMEM260-215ENST00000557626 MIGA2Q7L4E1 593 aa17.05■□□□□ 0.32
TMEM260-215ENST00000557626 TRIB2Q92519 343 aa17.05■□□□□ 0.32
TMEM260-215ENST00000557626 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
TMEM260-215ENST00000557626 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
TMEM260-215ENST00000557626 CHD9Q3L8U1 2897 aa17.04■□□□□ 0.32
TMEM260-215ENST00000557626 GPR37L1O60883 481 aa17.04■□□□□ 0.32
TMEM260-215ENST00000557626 CRKP46108 304 aa17.04■□□□□ 0.32
TMEM260-215ENST00000557626 ATN1P54259 1190 aaPredicted RBP17.04■□□□□ 0.32
TMEM260-215ENST00000557626 CCDC85BQ15834 202 aaPredicted RBP17.04■□□□□ 0.32
TMEM260-215ENST00000557626 GADL1Q6ZQY3 521 aa17.04■□□□□ 0.32
TMEM260-215ENST00000557626 BADQ92934 168 aa17.04■□□□□ 0.32
TMEM260-215ENST00000557626 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
TMEM260-215ENST00000557626 BABAM1Q9NWV8 329 aa17.04■□□□□ 0.32
TMEM260-215ENST00000557626 SLC45A1Q9Y2W3 748 aa17.04■□□□□ 0.32
TMEM260-215ENST00000557626 FRMPD3Q5JV73 1810 aa17.04■□□□□ 0.32
TMEM260-215ENST00000557626 FAM86C2PA6NEL3 165 aa17.03■□□□□ 0.32
TMEM260-215ENST00000557626 BMP1P13497 986 aa17.03■□□□□ 0.32
TMEM260-215ENST00000557626 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
TMEM260-215ENST00000557626 FAM110CQ1W6H9 321 aa17.03■□□□□ 0.32
TMEM260-215ENST00000557626 MFSD14BQ5SR56 506 aa17.03■□□□□ 0.32
TMEM260-215ENST00000557626 MPHOSPH8Q99549 860 aa17.03■□□□□ 0.32
TMEM260-215ENST00000557626 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
TMEM260-215ENST00000557626 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
TMEM260-215ENST00000557626 A0A0G2JLL6 359 aaPredicted RBP17.02■□□□□ 0.32
TMEM260-215ENST00000557626 SNAP23O00161 211 aa17.02■□□□□ 0.32
TMEM260-215ENST00000557626 RTP1P59025 263 aa17.02■□□□□ 0.32
TMEM260-215ENST00000557626 CHRNDQ07001 517 aa17.02■□□□□ 0.32
TMEM260-215ENST00000557626 KRT24Q2M2I5 525 aa17.02■□□□□ 0.32
TMEM260-215ENST00000557626 C15orf52Q6ZUT6 534 aaKnown RBP17.02■□□□□ 0.32
TMEM260-215ENST00000557626 PRRT2Q7Z6L0 340 aaPredicted RBP17.02■□□□□ 0.32
TMEM260-215ENST00000557626 FAM83AQ86UY5 434 aa17.02■□□□□ 0.32
TMEM260-215ENST00000557626 TSPYL2Q9H2G4 693 aaPredicted RBP17.02■□□□□ 0.32
TMEM260-215ENST00000557626 C11orf16Q9NQ32 467 aa17.02■□□□□ 0.32
TMEM260-215ENST00000557626 TMOD2Q9NZR1 351 aa17.02■□□□□ 0.32
TMEM260-215ENST00000557626 RPAP1Q9BWH6 1393 aaPredicted RBP17.02■□□□□ 0.31
TMEM260-215ENST00000557626 PLXNB2O15031 1838 aa17.01■□□□□ 0.31
TMEM260-215ENST00000557626 LHX8Q68G74 356 aa17.01■□□□□ 0.31
TMEM260-215ENST00000557626 CXXC1Q9P0U4 656 aaPredicted RBP17.01■□□□□ 0.31
TMEM260-215ENST00000557626 GJD2Q9UKL4 321 aa17.01■□□□□ 0.31
TMEM260-215ENST00000557626 ATP11BQ9Y2G3 1177 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms