RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 RNF208Q9H0X6 261 aa15.42■□□□□ 0.06
RTN1-208ENST00000557422 TMOD2Q9NZR1 351 aa15.42■□□□□ 0.06
RTN1-208ENST00000557422 NR2E3Q9Y5X4 410 aa15.42■□□□□ 0.06
RTN1-208ENST00000557422 MYPNQ86TC9 1320 aa15.42■□□□□ 0.06
RTN1-208ENST00000557422 ZBTB7BO15156 539 aaPredicted RBP15.41■□□□□ 0.06
RTN1-208ENST00000557422 INPP5BP32019 993 aa15.41■□□□□ 0.06
RTN1-208ENST00000557422 MIGA2Q7L4E1 593 aa15.41■□□□□ 0.06
RTN1-208ENST00000557422 VPS37DQ86XT2 251 aa15.41■□□□□ 0.06
RTN1-208ENST00000557422 ZNF341Q9BYN7 854 aa15.41■□□□□ 0.06
RTN1-208ENST00000557422 C9orf78Q9NZ63 289 aaPredicted RBP15.41■□□□□ 0.06
RTN1-208ENST00000557422 BIN2Q9UBW5 565 aaPredicted RBP15.41■□□□□ 0.06
RTN1-208ENST00000557422 FANCIQ9NVI1 1328 aa15.41■□□□□ 0.06
RTN1-208ENST00000557422 FRAT2O75474 233 aaPredicted RBP15.4■□□□□ 0.06
RTN1-208ENST00000557422 MOGSQ13724 837 aa15.4■□□□□ 0.06
RTN1-208ENST00000557422 KAZALD1Q96I82 304 aa15.4■□□□□ 0.06
RTN1-208ENST00000557422 KCNH4Q9UQ05 1017 aa15.4■□□□□ 0.06
RTN1-208ENST00000557422 MROH5Q6ZUA9 1318 aa15.4■□□□□ 0.06
RTN1-208ENST00000557422 RPAP1Q9BWH6 1393 aaPredicted RBP15.39■□□□□ 0.05
RTN1-208ENST00000557422 FARP2O94887 1054 aaPredicted RBP15.39■□□□□ 0.05
RTN1-208ENST00000557422 UBXN2AP68543 259 aa15.39■□□□□ 0.05
RTN1-208ENST00000557422 PRKCZQ05513 592 aa15.39■□□□□ 0.05
RTN1-208ENST00000557422 U2AF1L4Q8WU68 220 aaKnown RBP15.39■□□□□ 0.05
RTN1-208ENST00000557422 ZNF112Q9UJU3 913 aa15.39■□□□□ 0.05
RTN1-208ENST00000557422 BCRP11274 1271 aa15.38■□□□□ 0.05
RTN1-208ENST00000557422 EXOSC9Q06265 439 aaKnown RBP15.38■□□□□ 0.05
RTN1-208ENST00000557422 CAVIN4Q5BKX8 364 aa15.38■□□□□ 0.05
RTN1-208ENST00000557422 HHIPL2Q6UWX4 724 aa15.38■□□□□ 0.05
RTN1-208ENST00000557422 SUCLG2Q96I99 432 aa15.38■□□□□ 0.05
RTN1-208ENST00000557422 UNC93B1Q9H1C4 597 aa15.38■□□□□ 0.05
RTN1-208ENST00000557422 SUGT1Q9Y2Z0 365 aa15.38■□□□□ 0.05
RTN1-208ENST00000557422 CUL9Q8IWT3 2517 aa15.38■□□□□ 0.05
RTN1-208ENST00000557422 A0A1W2PPC1 479 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 SOX1O00570 391 aaPredicted RBP15.37■□□□□ 0.05
RTN1-208ENST00000557422 ALDH1L1O75891 902 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 SGPL1O95470 568 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 BCAMP50895 628 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 FCGRTP55899 365 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 LRRC24Q50LG9 513 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 GPAT2Q6NUI2 795 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 SLAIN1Q8ND83 568 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 FAM151AQ8WW52 585 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 GABRQQ9UN88 632 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 MAST3O60307 1309 aa15.37■□□□□ 0.05
RTN1-208ENST00000557422 CCDC184Q52MB2 194 aa15.36■□□□□ 0.05
RTN1-208ENST00000557422 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
RTN1-208ENST00000557422 METTL24Q5JXM2 366 aa15.36■□□□□ 0.05
RTN1-208ENST00000557422 VGLL2Q8N8G2 317 aa15.36■□□□□ 0.05
RTN1-208ENST00000557422 PARK7Q99497 189 aaKnown RBP15.36■□□□□ 0.05
RTN1-208ENST00000557422 SRCIN1Q9C0H9 1055 aa15.36■□□□□ 0.05
RTN1-208ENST00000557422 A0A0C4DFX4 3053 aa15.36■□□□□ 0.05
RTN1-208ENST00000557422 CXCL11O14625 94 aa15.35■□□□□ 0.05
RTN1-208ENST00000557422 ADCY3O60266 1144 aa15.35■□□□□ 0.05
RTN1-208ENST00000557422 EVI5O60447 810 aa15.35■□□□□ 0.05
RTN1-208ENST00000557422 PDE8BO95263 885 aa15.35■□□□□ 0.05
RTN1-208ENST00000557422 CYP2C8P10632 490 aa15.35■□□□□ 0.05
RTN1-208ENST00000557422 TCP10Q12799 353 aa15.35■□□□□ 0.05
RTN1-208ENST00000557422 NOL9Q5SY16 702 aaKnown RBP15.35■□□□□ 0.05
RTN1-208ENST00000557422 SLC4A10Q6U841 1118 aa15.35■□□□□ 0.05
RTN1-208ENST00000557422 LRCH3Q96II8 777 aa15.35■□□□□ 0.05
RTN1-208ENST00000557422 COL6A3P12111 3177 aa15.35■□□□□ 0.05
RTN1-208ENST00000557422 MGAMO43451 1857 aa15.35■□□□□ 0.05
RTN1-208ENST00000557422 NBPF7P0C2Y1 421 aaPredicted RBP15.34■□□□□ 0.05
RTN1-208ENST00000557422 ELNP15502 786 aa15.34■□□□□ 0.05
RTN1-208ENST00000557422 BICC1Q9H694 974 aaKnown RBP15.34■□□□□ 0.05
RTN1-208ENST00000557422 STAP2Q9UGK3 403 aa15.34■□□□□ 0.05
RTN1-208ENST00000557422 AK9Q5TCS8 1911 aa15.33■□□□□ 0.05
RTN1-208ENST00000557422 TFRCP02786 760 aaKnown RBP15.33■□□□□ 0.04
RTN1-208ENST00000557422 INHAP05111 366 aa15.33■□□□□ 0.04
RTN1-208ENST00000557422 CAPN2P17655 700 aa15.33■□□□□ 0.04
RTN1-208ENST00000557422 FLT3LGP49771 235 aa15.33■□□□□ 0.04
RTN1-208ENST00000557422 NFIAQ12857 509 aa15.33■□□□□ 0.04
RTN1-208ENST00000557422 RABL6Q3YEC7 729 aaPredicted RBP15.33■□□□□ 0.04
RTN1-208ENST00000557422 CDC42EP5Q6NZY7 148 aa15.33■□□□□ 0.04
RTN1-208ENST00000557422 WDR63Q8IWG1 891 aa15.33■□□□□ 0.04
RTN1-208ENST00000557422 UTYO14607 1347 aa15.33■□□□□ 0.04
RTN1-208ENST00000557422 FGFR2P21802 821 aa15.32■□□□□ 0.04
RTN1-208ENST00000557422 ANKRD44Q8N8A2 993 aa15.32■□□□□ 0.04
RTN1-208ENST00000557422 PXYLP1Q8TE99 480 aa15.32■□□□□ 0.04
RTN1-208ENST00000557422 DEFB118Q96PH6 123 aa15.32■□□□□ 0.04
RTN1-208ENST00000557422 FAM198AQ9UFP1 575 aa15.32■□□□□ 0.04
RTN1-208ENST00000557422 DAGLAQ9Y4D2 1042 aa15.32■□□□□ 0.04
RTN1-208ENST00000557422 KIF16BQ96L93 1317 aa15.32■□□□□ 0.04
RTN1-208ENST00000557422 LAMA3Q16787 3333 aa15.32■□□□□ 0.04
RTN1-208ENST00000557422 DIXDC1Q155Q3 683 aa15.31■□□□□ 0.04
RTN1-208ENST00000557422 FASTKD5Q7L8L6 764 aaKnown RBP15.31■□□□□ 0.04
RTN1-208ENST00000557422 ZFPM1Q8IX07 1006 aa15.31■□□□□ 0.04
RTN1-208ENST00000557422 KLHDC4Q8TBB5 520 aa15.31■□□□□ 0.04
RTN1-208ENST00000557422 WDR66Q8TBY9 1149 aa15.31■□□□□ 0.04
RTN1-208ENST00000557422 PAK6Q9NQU5 681 aaPredicted RBP15.31■□□□□ 0.04
RTN1-208ENST00000557422 SALL2Q9Y467 1007 aaPredicted RBP15.31■□□□□ 0.04
RTN1-208ENST00000557422 ZHX2Q9Y6X8 837 aa15.31■□□□□ 0.04
RTN1-208ENST00000557422 A0A0G2JLL6 359 aaPredicted RBP15.3■□□□□ 0.04
RTN1-208ENST00000557422 PHF20L1A8MW92 1017 aa15.3■□□□□ 0.04
RTN1-208ENST00000557422 IFIT1P09914 478 aaKnown RBP15.3■□□□□ 0.04
RTN1-208ENST00000557422 IRF5Q13568 498 aa15.3■□□□□ 0.04
RTN1-208ENST00000557422 PUM3Q15397 648 aaKnown RBP15.3■□□□□ 0.04
RTN1-208ENST00000557422 PRRT2Q7Z6L0 340 aaPredicted RBP15.3■□□□□ 0.04
RTN1-208ENST00000557422 PAWRQ96IZ0 340 aaKnown RBP15.3■□□□□ 0.04
RTN1-208ENST00000557422 CRISPLD2Q9H0B8 497 aa15.3■□□□□ 0.04
RTN1-208ENST00000557422 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms