RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.58□□□□□ -0.88
PSEN1-222ENST00000557356 FAM151AQ8WW52 585 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 SLC10A4Q96EP9 437 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 GPATCH3Q96I76 525 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 DCTPP1Q9H773 170 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 DBNLQ9UJU6 430 aaKnown RBP9.58□□□□□ -0.88
PSEN1-222ENST00000557356 DAGLAQ9Y4D2 1042 aa9.58□□□□□ -0.88
PSEN1-222ENST00000557356 TRPM7Q96QT4 1865 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 GPR75-ASB3A0A0A6YYF3 556 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 UBE2Q2LH0YL09 131 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 APBB1O00213 710 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 ENTPD3O75355 529 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 MAP3K12Q12852 859 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 GRM1Q13255 1194 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 LDLRAD1Q5T700 205 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 PRAMEF18Q5VWM3 479 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 NAA16Q6N069 864 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-222ENST00000557356 ANKRD13AQ8IZ07 590 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 IL1RAPL2Q9NP60 686 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 WBP1LQ9NX94 342 aa9.57□□□□□ -0.88
PSEN1-222ENST00000557356 ANGEL1Q9UNK9 670 aaKnown RBP9.57□□□□□ -0.88
PSEN1-222ENST00000557356 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-222ENST00000557356 GAKO14976 1311 aa9.56□□□□□ -0.88
PSEN1-222ENST00000557356 CTCFP49711 727 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-222ENST00000557356 DIXDC1Q155Q3 683 aa9.56□□□□□ -0.88
PSEN1-222ENST00000557356 NBPF12Q5TAG4 269 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-222ENST00000557356 CDC42EP5Q6NZY7 148 aa9.56□□□□□ -0.88
PSEN1-222ENST00000557356 DLK2Q6UY11 383 aa9.56□□□□□ -0.88
PSEN1-222ENST00000557356 NSUN4Q96CB9 384 aaKnown RBP9.56□□□□□ -0.88
PSEN1-222ENST00000557356 GCC1Q96CN9 775 aa9.56□□□□□ -0.88
PSEN1-222ENST00000557356 IDI2Q9BXS1 227 aa9.56□□□□□ -0.88
PSEN1-222ENST00000557356 RWDD1Q9H446 243 aaPredicted RBP9.56□□□□□ -0.88
PSEN1-222ENST00000557356 SNRKQ9NRH2 765 aa9.56□□□□□ -0.88
PSEN1-222ENST00000557356 PCDHAC2Q9Y5I4 1007 aa9.56□□□□□ -0.88
PSEN1-222ENST00000557356 MROH7-TTC4A0A0A0MT08 1334 aa9.56□□□□□ -0.88
PSEN1-222ENST00000557356 USP2O75604 605 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-222ENST00000557356 CYP2E1P05181 493 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-222ENST00000557356 SLC10A3P09131 477 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 HSPA1AP0DMV8 641 aaKnown RBP9.55□□□□□ -0.88
PSEN1-222ENST00000557356 HSPA1BP0DMV9 641 aaKnown RBP9.55□□□□□ -0.88
PSEN1-222ENST00000557356 ATP5JP18859 108 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 BTDP43251 543 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 ZAP70P43403 619 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 MAP3K9P80192 1104 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 PRKG1Q13976 671 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 LRRFIP1Q32MZ4 808 aaKnown RBP9.55□□□□□ -0.88
PSEN1-222ENST00000557356 TBC1D9Q6ZT07 1266 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 TEPSINQ96N21 525 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 CRBNQ96SW2 442 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 TMEM39BQ9GZU3 492 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 SCAF8Q9UPN6 1271 aaKnown RBP9.55□□□□□ -0.88
PSEN1-222ENST00000557356 CSADQ9Y600 493 aa9.55□□□□□ -0.88
PSEN1-222ENST00000557356 RPAP1Q9BWH6 1393 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 POLR2AP24928 1970 aaKnown RBP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 MANSC4A6NHS7 340 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 ERC2O15083 957 aa9.54□□□□□ -0.88
PSEN1-222ENST00000557356 IDH1O75874 414 aaKnown RBP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 ZBTB48P10074 688 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 PPP4CP60510 307 aa9.54□□□□□ -0.88
PSEN1-222ENST00000557356 SREBF2Q12772 1141 aa9.54□□□□□ -0.88
PSEN1-222ENST00000557356 HDAC1Q13547 482 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 OTUD7BQ6GQQ9 843 aa9.54□□□□□ -0.88
PSEN1-222ENST00000557356 ZSCAN25Q6NSZ9 544 aa9.54□□□□□ -0.88
PSEN1-222ENST00000557356 PI16Q6UXB8 463 aa9.54□□□□□ -0.88
PSEN1-222ENST00000557356 ZSCAN29Q8IWY8 852 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 ZNF341Q9BYN7 854 aa9.54□□□□□ -0.88
PSEN1-222ENST00000557356 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 DHX36Q9H2U1 1008 aaKnown RBP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 SUPT16HQ9Y5B9 1047 aaKnown RBP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 PAPPA2Q9BXP8 1791 aa9.54□□□□□ -0.88
PSEN1-222ENST00000557356 ZNF646O15015 1829 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-222ENST00000557356 ARAP2Q8WZ64 1704 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 FAM155AB1AL88 458 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-222ENST00000557356 WDHD1O75717 1129 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-222ENST00000557356 ALDH1A1P00352 501 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 CYP7A1P22680 504 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 CACNB3P54284 484 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 KIF23Q02241 960 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-222ENST00000557356 TCP10Q12799 353 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 RASAL3Q86YV0 1011 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 HAUS7Q99871 368 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 PRDM10Q9NQV6 1147 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 ECHDC1Q9NTX5 307 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 SAGE1Q9NXZ1 904 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 TLR7Q9NYK1 1049 aaKnown RBP9.53□□□□□ -0.88
PSEN1-222ENST00000557356 PCDHB15Q9Y5E8 787 aa9.53□□□□□ -0.88
PSEN1-222ENST00000557356 TBC1D12O60347 775 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 AOC2O75106 756 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 TM4SF4P48230 202 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 RGS3P49796 1198 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 SPRYD7Q5W111 196 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 MOB2Q70IA6 237 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 FOXP4Q8IVH2 680 aaPredicted RBP9.52□□□□□ -0.89
PSEN1-222ENST00000557356 TEX11Q8IYF3 940 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.52□□□□□ -0.89
PSEN1-222ENST00000557356 CSRNP1Q96S65 589 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 BCL11AQ9H165 835 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 PAG1Q9NWQ8 432 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 FAM198AQ9UFP1 575 aa9.52□□□□□ -0.89
PSEN1-222ENST00000557356 TAOK2Q9UL54 1235 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms