RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ADAMTSL4Q6UY14 1074 aa6.53□□□□□ -1.36
CHD8-212ENST00000557329 KIAA1211Q6ZU35 1233 aa6.53□□□□□ -1.36
CHD8-212ENST00000557329 USP26Q9BXU7 913 aa6.53□□□□□ -1.36
CHD8-212ENST00000557329 TMPRSS13Q9BYE2 586 aa6.53□□□□□ -1.36
CHD8-212ENST00000557329 C12orf49Q9H741 205 aa6.53□□□□□ -1.36
CHD8-212ENST00000557329 KRT82Q9NSB4 513 aa6.53□□□□□ -1.36
CHD8-212ENST00000557329 GAPVD1Q14C86 1478 aa6.53□□□□□ -1.36
CHD8-212ENST00000557329 TOPBP1Q92547 1522 aa6.52□□□□□ -1.37
CHD8-212ENST00000557329 LOC100289279A0A1B0GTE1 492 aa6.52□□□□□ -1.37
CHD8-212ENST00000557329 ADAM11O75078 769 aa6.52□□□□□ -1.37
CHD8-212ENST00000557329 EIF4BP23588 611 aaKnown RBP6.52□□□□□ -1.37
CHD8-212ENST00000557329 DNAJC14Q6Y2X3 702 aaPredicted RBP6.52□□□□□ -1.37
CHD8-212ENST00000557329 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 GAS2O43903 313 aaKnown RBP6.51□□□□□ -1.37
CHD8-212ENST00000557329 SLFN14P0C7P3 912 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 RLBP1P12271 317 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 XPCQ01831 940 aaPredicted RBP6.51□□□□□ -1.37
CHD8-212ENST00000557329 TMCO4Q5TGY1 634 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 NXPE4Q6UWF7 544 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 PRR23CQ6ZRP0 262 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 UTP4Q969X6 686 aaKnown RBP6.51□□□□□ -1.37
CHD8-212ENST00000557329 FAM46AQ96IP4 442 aaKnown RBP6.51□□□□□ -1.37
CHD8-212ENST00000557329 RAD18Q9NS91 495 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 KCNK4Q9NYG8 393 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 GPN3Q9UHW5 284 aaPredicted RBP6.51□□□□□ -1.37
CHD8-212ENST00000557329 AKAP2Q9Y2D5 859 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 RAXQ9Y2V3 346 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 AK5Q9Y6K8 562 aa6.51□□□□□ -1.37
CHD8-212ENST00000557329 SYNJ1O43426 1573 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 SNAPC4Q5SXM2 1469 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 LRRC14Q15048 493 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 ZNF326Q5BKZ1 582 aaKnown RBP6.5□□□□□ -1.37
CHD8-212ENST00000557329 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.5□□□□□ -1.37
CHD8-212ENST00000557329 NPAS4Q8IUM7 802 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 CLEC10AQ8IUN9 316 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 GIMAP7Q8NHV1 300 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 UBASH3BQ8TF42 649 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 MEGF10Q96KG7 1140 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 MYRFLQ96LU7 910 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 NRSN2Q9GZP1 204 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 STOML1Q9UBI4 398 aa6.5□□□□□ -1.37
CHD8-212ENST00000557329 RAD54L2Q9Y4B4 1467 aa6.49□□□□□ -1.37
CHD8-212ENST00000557329 DDX3YO15523 660 aaKnown RBP6.49□□□□□ -1.37
CHD8-212ENST00000557329 ALX3O95076 343 aa6.49□□□□□ -1.37
CHD8-212ENST00000557329 WISP1O95388 367 aa6.49□□□□□ -1.37
CHD8-212ENST00000557329 NME2P22392 152 aa6.49□□□□□ -1.37
CHD8-212ENST00000557329 MAOBP27338 520 aa6.49□□□□□ -1.37
CHD8-212ENST00000557329 SV2BQ7L1I2 683 aa6.49□□□□□ -1.37
CHD8-212ENST00000557329 AGGF1Q8N302 714 aaeCLIP6.49□□□□□ -1.37
CHD8-212ENST00000557329 C12orf50Q8NA57 414 aaPredicted RBP6.49□□□□□ -1.37
CHD8-212ENST00000557329 SOGA1O94964 1423 aa6.49□□□□□ -1.37
CHD8-212ENST00000557329 NECAB3Q96P71 396 aaPredicted RBP6.48□□□□□ -1.37
CHD8-212ENST00000557329 MRS2Q9HD23 443 aa6.48□□□□□ -1.37
CHD8-212ENST00000557329 CYP8B1Q9UNU6 501 aa6.48□□□□□ -1.37
CHD8-212ENST00000557329 ABCC8Q09428 1581 aa6.48□□□□□ -1.37
CHD8-212ENST00000557329 TTBK1Q5TCY1 1321 aaPredicted RBP6.48□□□□□ -1.37
CHD8-212ENST00000557329 COL17A1Q9UMD9 1497 aaPredicted RBP6.47□□□□□ -1.37
CHD8-212ENST00000557329 TIAF1O95411 115 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 GSTP1P09211 210 aaKnown RBP6.47□□□□□ -1.37
CHD8-212ENST00000557329 ARNTP27540 789 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 USP11P51784 963 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 DAB2P98082 770 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 SOX4Q06945 474 aaPredicted RBP6.47□□□□□ -1.37
CHD8-212ENST00000557329 PSMD2Q13200 908 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 PDE3AQ14432 1141 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 CPSF6Q16630 551 aaKnown RBP eCLIP6.47□□□□□ -1.37
CHD8-212ENST00000557329 PI16Q6UXB8 463 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 TMC4Q7Z404 712 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 FAM20CQ8IXL6 584 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 C3orf58Q8NDZ4 430 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 UBL7Q96S82 380 aaPredicted RBP6.47□□□□□ -1.37
CHD8-212ENST00000557329 FAM83CQ9BQN1 747 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 TRIM56Q9BRZ2 755 aaKnown RBP6.47□□□□□ -1.37
CHD8-212ENST00000557329 OSBPL7Q9BZF2 842 aa6.47□□□□□ -1.37
CHD8-212ENST00000557329 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.46□□□□□ -1.38
CHD8-212ENST00000557329 USP17L7P0C7H9 530 aa6.46□□□□□ -1.38
CHD8-212ENST00000557329 ST13P50502 369 aaKnown RBP6.46□□□□□ -1.38
CHD8-212ENST00000557329 MAP7Q14244 749 aa6.46□□□□□ -1.38
CHD8-212ENST00000557329 FBXO41Q8TF61 875 aa6.46□□□□□ -1.38
CHD8-212ENST00000557329 DUSP9Q99956 384 aaKnown RBP6.46□□□□□ -1.38
CHD8-212ENST00000557329 WWC3Q9ULE0 1092 aa6.46□□□□□ -1.38
CHD8-212ENST00000557329 PAX4O43316 350 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 SORBS3O60504 671 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 TRIM37O94972 964 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 BMP3P12645 472 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 TXKP42681 527 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 RPS26P62854 115 aaKnown RBP6.45□□□□□ -1.38
CHD8-212ENST00000557329 FAAP100Q0VG06 881 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 HGSNATQ68CP4 663 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 FBXO33Q7Z6M2 555 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 SULF2Q8IWU5 870 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 ATXN3LQ9H3M9 355 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 PARP2Q9UGN5 583 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 CLASP1Q7Z460 1538 aa6.45□□□□□ -1.38
CHD8-212ENST00000557329 DNMBPQ6XZF7 1577 aa6.44□□□□□ -1.38
CHD8-212ENST00000557329 AOC2O75106 756 aa6.44□□□□□ -1.38
CHD8-212ENST00000557329 ADH5P11766 374 aa6.44□□□□□ -1.38
CHD8-212ENST00000557329 LMNB1P20700 586 aa6.44□□□□□ -1.38
CHD8-212ENST00000557329 PREPP48147 710 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms