RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 IGKV5-2P06315 115 aa11.1□□□□□ -0.63
VRK1-206ENST00000557222 OGFOD1Q8N543 542 aa11.1□□□□□ -0.63
VRK1-206ENST00000557222 PI4KAP1Q8N8J0 262 aa11.1□□□□□ -0.63
VRK1-206ENST00000557222 RDH13Q8NBN7 331 aa11.1□□□□□ -0.63
VRK1-206ENST00000557222 PLA2G12BQ9BX93 195 aa11.1□□□□□ -0.63
VRK1-206ENST00000557222 STK31Q9BXU1 1019 aa11.1□□□□□ -0.63
VRK1-206ENST00000557222 CCT4P50991 539 aaKnown RBP11.09□□□□□ -0.63
VRK1-206ENST00000557222 PKN2Q16513 984 aaKnown RBP11.09□□□□□ -0.63
VRK1-206ENST00000557222 NOM1Q5C9Z4 860 aaKnown RBP11.09□□□□□ -0.63
VRK1-206ENST00000557222 DACT2Q5SW24 774 aa11.09□□□□□ -0.63
VRK1-206ENST00000557222 RASAL3Q86YV0 1011 aa11.09□□□□□ -0.63
VRK1-206ENST00000557222 ANKRD2Q9GZV1 360 aa11.09□□□□□ -0.63
VRK1-206ENST00000557222 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.09□□□□□ -0.63
VRK1-206ENST00000557222 ASTN2O75129 1339 aaPredicted RBP11.09□□□□□ -0.63
VRK1-206ENST00000557222 IL16Q14005 1332 aa11.09□□□□□ -0.63
VRK1-206ENST00000557222 PAPPA2Q9BXP8 1791 aa11.08□□□□□ -0.64
VRK1-206ENST00000557222 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
VRK1-206ENST00000557222 NF2P35240 595 aa11.08□□□□□ -0.64
VRK1-206ENST00000557222 IGHMBP2P38935 993 aaKnown RBP11.08□□□□□ -0.64
VRK1-206ENST00000557222 CTU1Q7Z7A3 348 aaKnown RBP11.08□□□□□ -0.64
VRK1-206ENST00000557222 TSPYL6Q8N831 410 aa11.08□□□□□ -0.64
VRK1-206ENST00000557222 JARID2Q92833 1246 aaPredicted RBP11.08□□□□□ -0.64
VRK1-206ENST00000557222 CCDC85AQ96PX6 553 aaPredicted RBP11.08□□□□□ -0.64
VRK1-206ENST00000557222 GREM2Q9H772 168 aa11.08□□□□□ -0.64
VRK1-206ENST00000557222 WNT10BO00744 389 aa11.07□□□□□ -0.64
VRK1-206ENST00000557222 CSF1RP07333 972 aa11.07□□□□□ -0.64
VRK1-206ENST00000557222 TM4SF4P48230 202 aa11.07□□□□□ -0.64
VRK1-206ENST00000557222 MYH3P11055 1940 aa11.07□□□□□ -0.64
VRK1-206ENST00000557222 UNCXA6NJT0 531 aa11.06□□□□□ -0.64
VRK1-206ENST00000557222 TLL1O43897 1013 aa11.06□□□□□ -0.64
VRK1-206ENST00000557222 GCKRQ14397 625 aa11.06□□□□□ -0.64
VRK1-206ENST00000557222 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
VRK1-206ENST00000557222 NBPF9Q3BBW0 867 aa11.06□□□□□ -0.64
VRK1-206ENST00000557222 PUS10Q3MIT2 529 aaKnown RBP11.06□□□□□ -0.64
VRK1-206ENST00000557222 TTLL5Q6EMB2 1281 aa11.06□□□□□ -0.64
VRK1-206ENST00000557222 C15orf52Q6ZUT6 534 aaKnown RBP11.06□□□□□ -0.64
VRK1-206ENST00000557222 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
VRK1-206ENST00000557222 WWC1Q8IX03 1113 aa11.06□□□□□ -0.64
VRK1-206ENST00000557222 CFHR5Q9BXR6 569 aa11.06□□□□□ -0.64
VRK1-206ENST00000557222 MYH16Q9H6N6 1097 aa11.06□□□□□ -0.64
VRK1-206ENST00000557222 HDAC9Q9UKV0 1011 aa11.06□□□□□ -0.64
VRK1-206ENST00000557222 ZNF804BA4D1E1 1349 aa11.06□□□□□ -0.64
VRK1-206ENST00000557222 UBE2Q2LH0YL09 131 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 NR1I2O75469 434 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 ITGA6P23229 1130 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 GCGRP47871 477 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 CASP7P55210 303 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 SREBF2Q12772 1141 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
VRK1-206ENST00000557222 ARMC9Q7Z3E5 817 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 LINS1Q8NG48 757 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 ZBED3Q96IU2 234 aaPredicted RBP11.05□□□□□ -0.64
VRK1-206ENST00000557222 MPHOSPH8Q99549 860 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 CACNA1FO60840 1977 aa11.05□□□□□ -0.64
VRK1-206ENST00000557222 GGCXP38435 758 aa11.04□□□□□ -0.64
VRK1-206ENST00000557222 INHBEP58166 350 aa11.04□□□□□ -0.64
VRK1-206ENST00000557222 FKBP1AP62942 108 aaKnown RBP11.04□□□□□ -0.64
VRK1-206ENST00000557222 FLIIQ13045 1269 aa11.04□□□□□ -0.64
VRK1-206ENST00000557222 LDLRAD1Q5T700 205 aa11.04□□□□□ -0.64
VRK1-206ENST00000557222 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
VRK1-206ENST00000557222 MTMR14Q8NCE2 650 aa11.04□□□□□ -0.64
VRK1-206ENST00000557222 DNAAF4Q8WXU2 420 aa11.04□□□□□ -0.64
VRK1-206ENST00000557222 TSR2Q969E8 191 aaKnown RBP11.04□□□□□ -0.64
VRK1-206ENST00000557222 COL1A1P02452 1464 aaPredicted RBP11.04□□□□□ -0.64
VRK1-206ENST00000557222 WTIPA6NIX2 430 aaPredicted RBP11.03□□□□□ -0.64
VRK1-206ENST00000557222 ALDH1A1P00352 501 aa11.03□□□□□ -0.64
VRK1-206ENST00000557222 MDM2Q00987 491 aaPredicted RBP11.03□□□□□ -0.64
VRK1-206ENST00000557222 FUT2Q10981 343 aa11.03□□□□□ -0.64
VRK1-206ENST00000557222 TTLL12Q14166 644 aaPredicted RBP11.03□□□□□ -0.64
VRK1-206ENST00000557222 MAP3K11Q16584 847 aa11.03□□□□□ -0.64
VRK1-206ENST00000557222 G2E3Q7L622 706 aa11.03□□□□□ -0.64
VRK1-206ENST00000557222 TXNRD3Q86VQ6 643 aa11.03□□□□□ -0.64
VRK1-206ENST00000557222 TMUB1Q9BVT8 246 aa11.03□□□□□ -0.64
VRK1-206ENST00000557222 IRX2Q9BZI1 471 aaPredicted RBP11.03□□□□□ -0.64
VRK1-206ENST00000557222 CD209Q9NNX6 404 aa11.03□□□□□ -0.64
VRK1-206ENST00000557222 PPP2R3BQ9Y5P8 575 aa11.03□□□□□ -0.64
VRK1-206ENST00000557222 ANKRD18BA2A2Z9 1011 aa11.02□□□□□ -0.65
VRK1-206ENST00000557222 KCNJ4P48050 445 aa11.02□□□□□ -0.65
VRK1-206ENST00000557222 GTF2IP78347 998 aa11.02□□□□□ -0.65
VRK1-206ENST00000557222 CHRNDQ07001 517 aa11.02□□□□□ -0.65
VRK1-206ENST00000557222 PRAMEF18Q5VWM3 479 aa11.02□□□□□ -0.65
VRK1-206ENST00000557222 MOB2Q70IA6 237 aa11.02□□□□□ -0.65
VRK1-206ENST00000557222 WDR63Q8IWG1 891 aa11.02□□□□□ -0.65
VRK1-206ENST00000557222 ZNF296Q8WUU4 475 aaPredicted RBP11.02□□□□□ -0.65
VRK1-206ENST00000557222 MXD3Q9BW11 206 aa11.02□□□□□ -0.65
VRK1-206ENST00000557222 PRKD2Q9BZL6 878 aa11.02□□□□□ -0.65
VRK1-206ENST00000557222 IRS2Q9Y4H2 1338 aa11.02□□□□□ -0.65
VRK1-206ENST00000557222 ZNF646O15015 1829 aaPredicted RBP11.01□□□□□ -0.65
VRK1-206ENST00000557222 GPR25O00155 361 aa11.01□□□□□ -0.65
VRK1-206ENST00000557222 ZMYND10O75800 440 aa11.01□□□□□ -0.65
VRK1-206ENST00000557222 IL1R1P14778 569 aa11.01□□□□□ -0.65
VRK1-206ENST00000557222 PTPN12Q05209 780 aaKnown RBP11.01□□□□□ -0.65
VRK1-206ENST00000557222 IFIT5Q13325 482 aaKnown RBP11.01□□□□□ -0.65
VRK1-206ENST00000557222 FKBP5Q13451 457 aaPredicted RBP11.01□□□□□ -0.65
VRK1-206ENST00000557222 DLGAP5Q15398 846 aa11.01□□□□□ -0.65
VRK1-206ENST00000557222 SPRYD7Q5W111 196 aa11.01□□□□□ -0.65
VRK1-206ENST00000557222 MANSC4A6NHS7 340 aaPredicted RBP11□□□□□ -0.65
VRK1-206ENST00000557222 MYO1BO43795 1136 aa11□□□□□ -0.65
VRK1-206ENST00000557222 PPP1R12BO60237 982 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms