RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TP53INP2Q8IXH6 220 aa6.42□□□□□ -1.38
SRP54-212ENST00000556992 SMG8Q8ND04 991 aaKnown RBP6.42□□□□□ -1.38
SRP54-212ENST00000556992 TBC1D32Q96NH3 1257 aa6.42□□□□□ -1.38
SRP54-212ENST00000556992 CYP4F12Q9HCS2 524 aa6.42□□□□□ -1.38
SRP54-212ENST00000556992 CFDP1Q9UEE9 299 aaPredicted RBP6.42□□□□□ -1.38
SRP54-212ENST00000556992 DHX57Q6P158 1386 aaKnown RBP6.42□□□□□ -1.38
SRP54-212ENST00000556992 RAB3GAP2Q9H2M9 1393 aa6.42□□□□□ -1.38
SRP54-212ENST00000556992 PHACTR2O75167 634 aa6.41□□□□□ -1.38
SRP54-212ENST00000556992 TNFRSF21O75509 655 aa6.41□□□□□ -1.38
SRP54-212ENST00000556992 POLR3DP05423 398 aaPredicted RBP6.41□□□□□ -1.38
SRP54-212ENST00000556992 CTSBP07858 339 aa6.41□□□□□ -1.38
SRP54-212ENST00000556992 ESRRAP11474 423 aaPredicted RBP6.41□□□□□ -1.38
SRP54-212ENST00000556992 MZF1P28698 734 aaPredicted RBP6.41□□□□□ -1.38
SRP54-212ENST00000556992 PEAR1Q5VY43 1037 aaPredicted RBP6.41□□□□□ -1.38
SRP54-212ENST00000556992 PAOXQ6QHF9 649 aa6.41□□□□□ -1.38
SRP54-212ENST00000556992 C2CD4AQ8NCU7 369 aaPredicted RBP6.41□□□□□ -1.38
SRP54-212ENST00000556992 TTC16Q8NEE8 873 aa6.41□□□□□ -1.38
SRP54-212ENST00000556992 PBRM1Q86U86 1689 aa6.41□□□□□ -1.38
SRP54-212ENST00000556992 CTTNBP2Q8WZ74 1663 aa6.4□□□□□ -1.38
SRP54-212ENST00000556992 CYP26A1O43174 497 aa6.4□□□□□ -1.38
SRP54-212ENST00000556992 PCSK2P16519 638 aa6.4□□□□□ -1.38
SRP54-212ENST00000556992 RAB6AP20340 208 aa6.4□□□□□ -1.38
SRP54-212ENST00000556992 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
SRP54-212ENST00000556992 GIMAP7Q8NHV1 300 aa6.4□□□□□ -1.38
SRP54-212ENST00000556992 GTF3C2Q8WUA4 911 aaPredicted RBP6.4□□□□□ -1.38
SRP54-212ENST00000556992 PBXIP1Q96AQ6 731 aa6.4□□□□□ -1.38
SRP54-212ENST00000556992 SUGCTQ9HAC7 445 aa6.4□□□□□ -1.38
SRP54-212ENST00000556992 LRRC4CQ9HCJ2 640 aa6.4□□□□□ -1.38
SRP54-212ENST00000556992 PRKAG2Q9UGJ0 569 aa6.4□□□□□ -1.38
SRP54-212ENST00000556992 NUP153P49790 1475 aaKnown RBP6.4□□□□□ -1.39
SRP54-212ENST00000556992 CEP170Q5SW79 1584 aa6.4□□□□□ -1.39
SRP54-212ENST00000556992 AAMPQ13685 434 aa6.39□□□□□ -1.39
SRP54-212ENST00000556992 EXOSC6Q5RKV6 272 aaKnown RBP6.39□□□□□ -1.39
SRP54-212ENST00000556992 LGR6Q9HBX8 967 aa6.39□□□□□ -1.39
SRP54-212ENST00000556992 ACTL7BQ9Y614 415 aa6.39□□□□□ -1.39
SRP54-212ENST00000556992 TROQ12816 1431 aaPredicted RBP6.39□□□□□ -1.39
SRP54-212ENST00000556992 EHBP1L1Q8N3D4 1523 aa6.39□□□□□ -1.39
SRP54-212ENST00000556992 HECW1Q76N89 1606 aa6.39□□□□□ -1.39
SRP54-212ENST00000556992 ECEL1O95672 775 aa6.38□□□□□ -1.39
SRP54-212ENST00000556992 RPLP1P05386 114 aaKnown RBP6.38□□□□□ -1.39
SRP54-212ENST00000556992 SOX4Q06945 474 aaPredicted RBP6.38□□□□□ -1.39
SRP54-212ENST00000556992 CBLL1Q75N03 491 aa6.38□□□□□ -1.39
SRP54-212ENST00000556992 ZAR1Q86SH2 424 aa6.38□□□□□ -1.39
SRP54-212ENST00000556992 VSIG10LQ86VR7 867 aa6.38□□□□□ -1.39
SRP54-212ENST00000556992 FLCNQ8NFG4 579 aa6.38□□□□□ -1.39
SRP54-212ENST00000556992 GATA6Q92908 595 aa6.38□□□□□ -1.39
SRP54-212ENST00000556992 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
SRP54-212ENST00000556992 BHLHE41Q9C0J9 482 aaPredicted RBP6.38□□□□□ -1.39
SRP54-212ENST00000556992 UACAQ9BZF9 1416 aa6.38□□□□□ -1.39
SRP54-212ENST00000556992 PLB1Q6P1J6 1458 aa6.38□□□□□ -1.39
SRP54-212ENST00000556992 KIAA0556O60303 1618 aa6.38□□□□□ -1.39
SRP54-212ENST00000556992 ATP10BO94823 1461 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 HFM1A2PYH4 1435 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 PRNPP04156 253 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 NFICP08651 508 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 TSPY4P0CV99 314 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 TSPY10P0CW01 314 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 ADH5P11766 374 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 JAG1P78504 1218 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 ZNF574Q6ZN55 896 aaPredicted RBP6.37□□□□□ -1.39
SRP54-212ENST00000556992 ZNF765Q7L2R6 523 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 SNX29Q8TEQ0 813 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 PMEPA1Q969W9 287 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 NRSN2Q9GZP1 204 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 RRP7BPQ9NSQ0 103 aa6.37□□□□□ -1.39
SRP54-212ENST00000556992 ZC3H7BQ9UGR2 993 aaKnown RBP6.37□□□□□ -1.39
SRP54-212ENST00000556992 TCOF1Q13428 1488 aaKnown RBP6.36□□□□□ -1.39
SRP54-212ENST00000556992 ROCK1Q13464 1354 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 ZNF644Q9H582 1327 aaPredicted RBP6.36□□□□□ -1.39
SRP54-212ENST00000556992 CARNS1A5YM72 827 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 DYNC1LI2O43237 492 aaPredicted RBP6.36□□□□□ -1.39
SRP54-212ENST00000556992 C8AP07357 584 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 EDN3P14138 238 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 MAOBP27338 520 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 SPRED3Q2MJR0 410 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 AKAP4Q5JQC9 854 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 DYMQ7RTS9 669 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 ANO2Q9NQ90 1003 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 PAK6Q9NQU5 681 aaPredicted RBP6.36□□□□□ -1.39
SRP54-212ENST00000556992 FAM105AQ9NUU6 356 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 CCDC87Q9NVE4 849 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 CFAP43Q8NDM7 1665 aa6.36□□□□□ -1.39
SRP54-212ENST00000556992 CDK13Q14004 1512 aaKnown RBP6.35□□□□□ -1.39
SRP54-212ENST00000556992 PTPRKQ15262 1439 aa6.35□□□□□ -1.39
SRP54-212ENST00000556992 ZNF423Q2M1K9 1284 aa6.35□□□□□ -1.39
SRP54-212ENST00000556992 DIEXFQ68CQ4 756 aaKnown RBP6.35□□□□□ -1.39
SRP54-212ENST00000556992 EZH1Q92800 747 aaPredicted RBP6.35□□□□□ -1.39
SRP54-212ENST00000556992 FBXL18Q96ME1 805 aa6.35□□□□□ -1.39
SRP54-212ENST00000556992 METTL22Q9BUU2 404 aaPredicted RBP6.35□□□□□ -1.39
SRP54-212ENST00000556992 SEMA6CQ9H3T2 930 aa6.35□□□□□ -1.39
SRP54-212ENST00000556992 SOX17Q9H6I2 414 aaPredicted RBP6.35□□□□□ -1.39
SRP54-212ENST00000556992 BSDC1Q9NW68 430 aaPredicted RBP6.35□□□□□ -1.39
SRP54-212ENST00000556992 AP4E1Q9UPM8 1137 aa6.35□□□□□ -1.39
SRP54-212ENST00000556992 AMOTL2Q9Y2J4 779 aa6.35□□□□□ -1.39
SRP54-212ENST00000556992 CHD1O14646 1710 aa6.35□□□□□ -1.39
SRP54-212ENST00000556992 MAGI3Q5TCQ9 1506 aa6.35□□□□□ -1.39
SRP54-212ENST00000556992 NAIPQ13075 1403 aa6.34□□□□□ -1.39
SRP54-212ENST00000556992 ARID1BQ8NFD5 2236 aaPredicted RBP6.34□□□□□ -1.39
SRP54-212ENST00000556992 FZD6O60353 706 aa6.34□□□□□ -1.39
SRP54-212ENST00000556992 GRIA4P48058 902 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms