RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 CWC27Q6UX04 472 aaKnown RBP11.71□□□□□ -0.53
TMEM260-213ENST00000556929 FAM163AQ96GL9 167 aaPredicted RBP11.71□□□□□ -0.53
TMEM260-213ENST00000556929 CNOT7Q9UIV1 285 aaKnown RBP11.71□□□□□ -0.53
TMEM260-213ENST00000556929 CDK5RAP2Q96SN8 1893 aa11.71□□□□□ -0.53
TMEM260-213ENST00000556929 WDR90Q96KV7 1748 aa11.71□□□□□ -0.54
TMEM260-213ENST00000556929 FOCADQ5VW36 1801 aa11.7□□□□□ -0.54
TMEM260-213ENST00000556929 GAKO14976 1311 aa11.7□□□□□ -0.54
TMEM260-213ENST00000556929 RAD50Q92878 1312 aa11.7□□□□□ -0.54
TMEM260-213ENST00000556929 TCRBV5S4A2TA0A5A2 114 aa11.7□□□□□ -0.54
TMEM260-213ENST00000556929 C19orf67A6NJJ6 358 aa11.7□□□□□ -0.54
TMEM260-213ENST00000556929 DIXDC1Q155Q3 683 aa11.7□□□□□ -0.54
TMEM260-213ENST00000556929 MCMDC2Q4G0Z9 681 aa11.7□□□□□ -0.54
TMEM260-213ENST00000556929 MICALL2Q8IY33 904 aa11.7□□□□□ -0.54
TMEM260-213ENST00000556929 AIDAQ96BJ3 306 aa11.7□□□□□ -0.54
TMEM260-213ENST00000556929 GPR75-ASB3A0A0A6YYF3 556 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 MAGEB6P1A0A0J9YX57 407 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 PLCG2P16885 1265 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 BTDP43251 543 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 ZNF280AP59817 542 aaPredicted RBP11.69□□□□□ -0.54
TMEM260-213ENST00000556929 DLGAP5Q15398 846 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 CFAP100Q494V2 611 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 MTMR14Q8NCE2 650 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 ZNF384Q8TF68 577 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 ZDHHC15Q96MV8 337 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 PUS7LQ9H0K6 701 aaKnown RBP11.69□□□□□ -0.54
TMEM260-213ENST00000556929 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 AATFQ9NY61 560 aaKnown RBP eCLIP11.69□□□□□ -0.54
TMEM260-213ENST00000556929 GPRC5DQ9NZD1 345 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
TMEM260-213ENST00000556929 A0A0D9SFI3 127 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 IQCA1LA6NCM1 817 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 MYO1BO43795 1136 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 CHGBP05060 677 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 GNAT2P19087 354 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 PPP4CP60510 307 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 ADGRA1Q86SQ6 560 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 MIGA1Q8NAN2 632 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 OSBP2Q969R2 916 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 L3MBTL3Q96JM7 780 aaPredicted RBP11.68□□□□□ -0.54
TMEM260-213ENST00000556929 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
TMEM260-213ENST00000556929 ADARB2Q9NS39 739 aaKnown RBP11.68□□□□□ -0.54
TMEM260-213ENST00000556929 HACL1Q9UJ83 578 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 MYH1P12882 1939 aa11.68□□□□□ -0.54
TMEM260-213ENST00000556929 CCDC171Q6TFL3 1326 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 M0R2C6 588 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 SGSM2O43147 1006 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 GPAA1O43292 621 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 MBD4O95243 580 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 DYNLL1P63167 89 aaKnown RBP11.67□□□□□ -0.54
TMEM260-213ENST00000556929 RBM26Q5T8P6 1007 aaKnown RBP11.67□□□□□ -0.54
TMEM260-213ENST00000556929 KIAA1211Q6ZU35 1233 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 ESYT1Q9BSJ8 1104 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 TMOD2Q9NZR1 351 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 FARP1Q9Y4F1 1045 aaPredicted RBP11.67□□□□□ -0.54
TMEM260-213ENST00000556929 NAV1Q8NEY1 1877 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 SRCAPQ6ZRS2 3230 aa11.67□□□□□ -0.54
TMEM260-213ENST00000556929 EPS15P42566 896 aa11.66□□□□□ -0.54
TMEM260-213ENST00000556929 KIF4BQ2VIQ3 1234 aa11.66□□□□□ -0.54
TMEM260-213ENST00000556929 TBC1D10BQ4KMP7 808 aaPredicted RBP11.66□□□□□ -0.54
TMEM260-213ENST00000556929 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
TMEM260-213ENST00000556929 SAMD7Q7Z3H4 446 aa11.66□□□□□ -0.54
TMEM260-213ENST00000556929 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
TMEM260-213ENST00000556929 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
TMEM260-213ENST00000556929 PRMT6Q96LA8 375 aaPredicted RBP11.66□□□□□ -0.54
TMEM260-213ENST00000556929 RIOK1Q9BRS2 568 aaKnown RBP11.66□□□□□ -0.54
TMEM260-213ENST00000556929 CRNKL1Q9BZJ0 848 aaKnown RBP11.66□□□□□ -0.54
TMEM260-213ENST00000556929 USP40Q9NVE5 1235 aa11.66□□□□□ -0.54
TMEM260-213ENST00000556929 SLC4A4Q9Y6R1 1079 aa11.66□□□□□ -0.54
TMEM260-213ENST00000556929 RPAP1Q9BWH6 1393 aaPredicted RBP11.66□□□□□ -0.54
TMEM260-213ENST00000556929 BAZ2AQ9UIF9 1905 aaKnown RBP11.65□□□□□ -0.54
TMEM260-213ENST00000556929 SHTN1A0MZ66 631 aa11.65□□□□□ -0.54
TMEM260-213ENST00000556929 WNT10BO00744 389 aa11.65□□□□□ -0.54
TMEM260-213ENST00000556929 REC8O95072 547 aa11.65□□□□□ -0.54
TMEM260-213ENST00000556929 USP5P45974 858 aa11.65□□□□□ -0.54
TMEM260-213ENST00000556929 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
TMEM260-213ENST00000556929 CCDC129Q6ZRS4 1044 aa11.65□□□□□ -0.54
TMEM260-213ENST00000556929 USP50Q70EL3 339 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-213ENST00000556929 TEX11Q8IYF3 940 aa11.65□□□□□ -0.54
TMEM260-213ENST00000556929 SH3RF3Q8TEJ3 882 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-213ENST00000556929 ZBED3Q96IU2 234 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-213ENST00000556929 STRBPQ96SI9 672 aaKnown RBP11.65□□□□□ -0.54
TMEM260-213ENST00000556929 TDRD3Q9H7E2 651 aaKnown RBP11.65□□□□□ -0.54
TMEM260-213ENST00000556929 CREBZFQ9NS37 354 aa11.65□□□□□ -0.54
TMEM260-213ENST00000556929 PATL2C9JE40 543 aaKnown RBP11.64□□□□□ -0.55
TMEM260-213ENST00000556929 APPP05067 770 aa11.64□□□□□ -0.55
TMEM260-213ENST00000556929 EPHX2P34913 555 aa11.64□□□□□ -0.55
TMEM260-213ENST00000556929 TNNI2P48788 182 aa11.64□□□□□ -0.55
TMEM260-213ENST00000556929 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
TMEM260-213ENST00000556929 CDC42EP5Q6NZY7 148 aa11.64□□□□□ -0.55
TMEM260-213ENST00000556929 ZNF589Q86UQ0 364 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-213ENST00000556929 PNMA8AQ86V59 439 aaPredicted RBP11.64□□□□□ -0.55
TMEM260-213ENST00000556929 NACAP1Q9BZK3 213 aa11.64□□□□□ -0.55
TMEM260-213ENST00000556929 ANO2Q9NQ90 1003 aa11.64□□□□□ -0.55
TMEM260-213ENST00000556929 ATP8A2Q9NTI2 1148 aa11.64□□□□□ -0.55
TMEM260-213ENST00000556929 PCDHAC2Q9Y5I4 1007 aa11.64□□□□□ -0.55
TMEM260-213ENST00000556929 POLR2AP24928 1970 aaKnown RBP11.64□□□□□ -0.55
TMEM260-213ENST00000556929 LAMB1P07942 1786 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms