RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	DIXDC1	Q155Q3	683 aa		10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	HSP90AB4P	Q58FF6	505 aa		10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	TTC39A	Q5SRH9	613 aa		10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	TSHZ3	Q63HK5	1081 aa		10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	ZNF384	Q8TF68	577 aa		10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	ZBED3	Q96IU2	234 aa	Predicted RBP	10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	LRRCC1	Q9C099	1032 aa		10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	ANTXR1	Q9H6X2	564 aa		10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	ABCF2	Q9UG63	623 aa		10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	DENND2A	Q9ULE3	1009 aa		10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	MYO3B	Q8WXR4	1341 aa		10.82	□□□□□ -0.68
PRKCH-222	ENST00000556778	SCN9A	Q15858	1988 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	CCDC88A	Q3V6T2	1871 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	CLRN2	A0PK11	232 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	CYP2E1	P05181	493 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	ZAP70	P43403	619 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	CRK	P46108	304 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	FSTL1	Q12841	308 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	HDAC1	Q13547	482 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	CCDC158	Q5M9N0	1113 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	B4GALNT3	Q6L9W6	998 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	CLASRP	Q8N2M8	674 aa	Known RBP	10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	WDR66	Q8TBY9	1149 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	TMC2	Q8TDI7	906 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	EDC3	Q96F86	508 aa	Known RBP	10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	PIH1D3	Q9NQM4	214 aa	Known RBP	10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	GGA3	Q9NZ52	723 aa		10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKCH-222	ENST00000556778	SEMA3E	O15041	775 aa		10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	IFIT2	P09913	472 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	CACNB3	P54284	484 aa		10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	DLGAP5	Q15398	846 aa		10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	ANKRD45	Q5TZF3	282 aa		10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	CST9	Q5W186	159 aa		10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	APOBEC3H	Q6NTF7	200 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	TBC1D22A	Q8WUA7	517 aa		10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	TDRD3	Q9H7E2	651 aa	Known RBP	10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	HDAC9	Q9UKV0	1011 aa		10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	PASK	Q96RG2	1323 aa		10.8	□□□□□ -0.68
PRKCH-222	ENST00000556778	CHGB	P05060	677 aa		10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	LDHB	P07195	334 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	UQCRFS1P1	P0C7P4	283 aa		10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	MECOM	Q03112	1051 aa		10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	SLFNL1	Q499Z3	407 aa		10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	KRT26	Q7Z3Y9	468 aa		10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	CDAN1	Q8IWY9	1227 aa		10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	ZC3H15	Q8WU90	426 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	DCPS	Q96C86	337 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	CRISPLD2	Q9H0B8	497 aa		10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	BOLA2	Q9H3K6	86 aa		10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778	DICER1	Q9UPY3	1922 aa	Known RBP	10.79	□□□□□ -0.68
PRKCH-222	ENST00000556778		A0A1B0GUL6	1792 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	HSPA6	P17066	643 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	CDC37L1	Q7L3B6	337 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	ADGRA1	Q86SQ6	560 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	MTMR14	Q8NCE2	650 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	SPRYD3	Q8NCJ5	442 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	RWDD1	Q9H446	243 aa	Predicted RBP	10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	ZNF408	Q9H9D4	720 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	RAI14	Q9P0K7	980 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	ZNF70	Q9UC06	446 aa	Predicted RBP	10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	SERPINA10	Q9UK55	444 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	FZD1	Q9UP38	647 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	SALL1	Q9NSC2	1324 aa		10.78	□□□□□ -0.68
PRKCH-222	ENST00000556778	POTEM	A6NI47	508 aa		10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	MAP4K4	O95819	1239 aa	Predicted RBP	10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	POTEG	Q6S5H5	508 aa		10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	MOB2	Q70IA6	237 aa		10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	ERICH6	Q7L0X2	663 aa		10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	SMC5	Q8IY18	1101 aa		10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	TEKT1	Q969V4	418 aa		10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	NSUN4	Q96CB9	384 aa	Known RBP	10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	ZDHHC15	Q96MV8	337 aa		10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	DNAJC2	Q99543	621 aa	Known RBP	10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	VEZT	Q9HBM0	779 aa		10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	GPHN	Q9NQX3	736 aa	Predicted RBP	10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	LRP2BP	Q9P2M1	347 aa		10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	DAGLA	Q9Y4D2	1042 aa		10.77	□□□□□ -0.69
PRKCH-222	ENST00000556778	TCP10L2	B9ZVM9	353 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	GOLIM4	O00461	696 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	CELF2	O95319	508 aa	Known RBP	10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	ATP5J	P18859	108 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	APLP1	P51693	650 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	AAMP	Q13685	434 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	CDC42EP5	Q6NZY7	148 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	HHIPL2	Q6UWX4	724 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	SULF1	Q8IWU6	871 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	ZFPM1	Q8IX07	1006 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	GCC1	Q96CN9	775 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	CDCA5	Q96FF9	252 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	MRI	Q9BWK5	157 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	LNPK	Q9C0E8	428 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	DEFB129	Q9H1M3	183 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	SUGT1	Q9Y2Z0	365 aa		10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	PDS5A	Q29RF7	1337 aa	Known RBP	10.76	□□□□□ -0.69
PRKCH-222	ENST00000556778	IDH1	O75874	414 aa	Known RBP	10.75	□□□□□ -0.69
PRKCH-222	ENST00000556778	SLURP2	P0DP57	97 aa		10.75	□□□□□ -0.69
PRKCH-222	ENST00000556778	HDLBP	Q00341	1268 aa	Known RBP	10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms