RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 CLUAP1Q96AJ1 413 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 PHOX2BQ99453 314 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 GOPCQ9HD26 462 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 MYOZ2Q9NPC6 264 aa11.83□□□□□ -0.52
MARK3-211ENST00000556744 RASSF10A6NK89 507 aa11.82□□□□□ -0.52
MARK3-211ENST00000556744 GNAI2P04899 355 aa11.82□□□□□ -0.52
MARK3-211ENST00000556744 MS4A1P11836 297 aa11.82□□□□□ -0.52
MARK3-211ENST00000556744 PTPREP23469 700 aa11.82□□□□□ -0.52
MARK3-211ENST00000556744 IL15P40933 162 aaPredicted RBP11.82□□□□□ -0.52
MARK3-211ENST00000556744 MXD3Q9BW11 206 aa11.82□□□□□ -0.52
MARK3-211ENST00000556744 REPIN1Q9BWE0 567 aaKnown RBP11.82□□□□□ -0.52
MARK3-211ENST00000556744 PITPNM2Q9BZ72 1349 aa11.82□□□□□ -0.52
MARK3-211ENST00000556744 CNTNAP1P78357 1384 aa11.81□□□□□ -0.52
MARK3-211ENST00000556744 TRAF5O00463 557 aa11.81□□□□□ -0.52
MARK3-211ENST00000556744 GYG1P46976 350 aa11.81□□□□□ -0.52
MARK3-211ENST00000556744 FMR1Q06787 632 aaKnown RBP eCLIP11.81□□□□□ -0.52
MARK3-211ENST00000556744 PUM3Q15397 648 aaKnown RBP11.81□□□□□ -0.52
MARK3-211ENST00000556744 LPIN2Q92539 896 aa11.81□□□□□ -0.52
MARK3-211ENST00000556744 GLIS2Q9BZE0 524 aaPredicted RBP11.81□□□□□ -0.52
MARK3-211ENST00000556744 WNT10BO00744 389 aa11.8□□□□□ -0.52
MARK3-211ENST00000556744 SRGAP3O43295 1099 aa11.8□□□□□ -0.52
MARK3-211ENST00000556744 SCARF1Q14162 830 aa11.8□□□□□ -0.52
MARK3-211ENST00000556744 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
MARK3-211ENST00000556744 PA2G4Q9UQ80 394 aaKnown RBP11.8□□□□□ -0.52
MARK3-211ENST00000556744 ASTN2O75129 1339 aaPredicted RBP11.8□□□□□ -0.52
MARK3-211ENST00000556744 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 SSTR3P32745 418 aaPredicted RBP11.79□□□□□ -0.52
MARK3-211ENST00000556744 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 NBPF9Q3BBW0 867 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 CAVIN4Q5BKX8 364 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 KRT26Q7Z3Y9 468 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 USP48Q86UV5 1035 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 DCPSQ96C86 337 aaKnown RBP11.79□□□□□ -0.52
MARK3-211ENST00000556744 HHIPL1Q96JK4 782 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 MRIQ9BWK5 157 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 CEP126Q9P2H0 1117 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 RCAN3Q9UKA8 241 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 TLL2Q9Y6L7 1015 aa11.79□□□□□ -0.52
MARK3-211ENST00000556744 PNMA6EA0A0J9YXQ4 647 aa11.78□□□□□ -0.52
MARK3-211ENST00000556744 IFIT1P09914 478 aaKnown RBP11.78□□□□□ -0.52
MARK3-211ENST00000556744 BCAMP50895 628 aa11.78□□□□□ -0.52
MARK3-211ENST00000556744 SAPCD2Q86UD0 394 aa11.78□□□□□ -0.52
MARK3-211ENST00000556744 KIAA0825Q8IV33 1275 aa11.78□□□□□ -0.52
MARK3-211ENST00000556744 FTSJ3Q8IY81 847 aaKnown RBP11.78□□□□□ -0.52
MARK3-211ENST00000556744 SIL1Q9H173 461 aa11.78□□□□□ -0.52
MARK3-211ENST00000556744 GGA3Q9NZ52 723 aa11.78□□□□□ -0.52
MARK3-211ENST00000556744 HDAC9Q9UKV0 1011 aa11.78□□□□□ -0.52
MARK3-211ENST00000556744 ARAP2Q8WZ64 1704 aa11.77□□□□□ -0.52
MARK3-211ENST00000556744 CELF2O95319 508 aaKnown RBP11.77□□□□□ -0.53
MARK3-211ENST00000556744 SLC5A1P13866 664 aa11.77□□□□□ -0.53
MARK3-211ENST00000556744 COL9A1P20849 921 aa11.77□□□□□ -0.53
MARK3-211ENST00000556744 HDLBPQ00341 1268 aaKnown RBP11.77□□□□□ -0.53
MARK3-211ENST00000556744 ATP2B3Q16720 1220 aa11.77□□□□□ -0.53
MARK3-211ENST00000556744 DEFB115Q30KQ5 88 aa11.77□□□□□ -0.53
MARK3-211ENST00000556744 ANGEL2Q5VTE6 544 aaKnown RBP11.77□□□□□ -0.53
MARK3-211ENST00000556744 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
MARK3-211ENST00000556744 TBC1D22AQ8WUA7 517 aa11.77□□□□□ -0.53
MARK3-211ENST00000556744 SERPINA10Q9UK55 444 aa11.77□□□□□ -0.53
MARK3-211ENST00000556744 NOP58Q9Y2X3 529 aaKnown RBP11.77□□□□□ -0.53
MARK3-211ENST00000556744 SUGT1Q9Y2Z0 365 aa11.77□□□□□ -0.53
MARK3-211ENST00000556744 ADM5C9JUS6 153 aa11.76□□□□□ -0.53
MARK3-211ENST00000556744 VEGFBP49765 207 aa11.76□□□□□ -0.53
MARK3-211ENST00000556744 MFSD14BQ5SR56 506 aa11.76□□□□□ -0.53
MARK3-211ENST00000556744 DLK2Q6UY11 383 aa11.76□□□□□ -0.53
MARK3-211ENST00000556744 VPS37DQ86XT2 251 aa11.76□□□□□ -0.53
MARK3-211ENST00000556744 ITPRIPQ8IWB1 547 aa11.76□□□□□ -0.53
MARK3-211ENST00000556744 PANK1Q8TE04 598 aa11.76□□□□□ -0.53
MARK3-211ENST00000556744 GPR108Q9NPR9 543 aa11.76□□□□□ -0.53
MARK3-211ENST00000556744 FAM217BQ9NTX9 383 aaPredicted RBP11.76□□□□□ -0.53
MARK3-211ENST00000556744 MKRN1Q9UHC7 482 aaKnown RBP11.76□□□□□ -0.53
MARK3-211ENST00000556744 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
MARK3-211ENST00000556744 PDE3AQ14432 1141 aa11.75□□□□□ -0.53
MARK3-211ENST00000556744 MVPQ14764 893 aaKnown RBP11.75□□□□□ -0.53
MARK3-211ENST00000556744 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
MARK3-211ENST00000556744 GRIK5Q16478 980 aa11.75□□□□□ -0.53
MARK3-211ENST00000556744 CDCA5Q96FF9 252 aa11.75□□□□□ -0.53
MARK3-211ENST00000556744 PRMT6Q96LA8 375 aaPredicted RBP11.75□□□□□ -0.53
MARK3-211ENST00000556744 ZBTB40Q9NUA8 1239 aa11.75□□□□□ -0.53
MARK3-211ENST00000556744 AKAP2Q9Y2D5 859 aa11.75□□□□□ -0.53
MARK3-211ENST00000556744 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.75□□□□□ -0.53
MARK3-211ENST00000556744 PDS5AQ29RF7 1337 aaKnown RBP11.75□□□□□ -0.53
MARK3-211ENST00000556744 SALL1Q9NSC2 1324 aa11.75□□□□□ -0.53
MARK3-211ENST00000556744 THSD7BQ9C0I4 1608 aa11.75□□□□□ -0.53
MARK3-211ENST00000556744 TIMM10P62072 90 aa11.74□□□□□ -0.53
MARK3-211ENST00000556744 FKBP1BP68106 108 aa11.74□□□□□ -0.53
MARK3-211ENST00000556744 TFCP2Q12800 502 aa11.74□□□□□ -0.53
MARK3-211ENST00000556744 CFAP100Q494V2 611 aa11.74□□□□□ -0.53
MARK3-211ENST00000556744 CEP85Q6P2H3 762 aa11.74□□□□□ -0.53
MARK3-211ENST00000556744 APOBEC3FQ8IUX4 373 aaKnown RBP11.74□□□□□ -0.53
MARK3-211ENST00000556744 WDR66Q8TBY9 1149 aa11.74□□□□□ -0.53
MARK3-211ENST00000556744 OTUD5Q96G74 571 aa11.74□□□□□ -0.53
MARK3-211ENST00000556744 PCMTD1Q96MG8 357 aaPredicted RBP11.74□□□□□ -0.53
MARK3-211ENST00000556744 ABT1Q9ULW3 272 aaKnown RBP11.74□□□□□ -0.53
MARK3-211ENST00000556744 TTF2Q9UNY4 1162 aaKnown RBP11.74□□□□□ -0.53
MARK3-211ENST00000556744 JAG2Q9Y219 1238 aa11.74□□□□□ -0.53
MARK3-211ENST00000556744 COL1A1P02452 1464 aaPredicted RBP11.74□□□□□ -0.53
MARK3-211ENST00000556744 A0A1B0GUL7 405 aa11.73□□□□□ -0.53
MARK3-211ENST00000556744 PHKA1P46020 1223 aa11.73□□□□□ -0.53
MARK3-211ENST00000556744 AOX1Q06278 1338 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms