RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 WNK4Q96J92 1243 aa12.74□□□□□ -0.37
SHMT2-224ENST00000556737 NEUROD6Q96NK8 337 aa12.74□□□□□ -0.37
SHMT2-224ENST00000556737 COG6Q9Y2V7 657 aa12.74□□□□□ -0.37
SHMT2-224ENST00000556737 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
SHMT2-224ENST00000556737 MS4A1P11836 297 aa12.73□□□□□ -0.37
SHMT2-224ENST00000556737 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
SHMT2-224ENST00000556737 NFIAQ12857 509 aa12.73□□□□□ -0.37
SHMT2-224ENST00000556737 C20orf194Q5TEA3 1177 aa12.73□□□□□ -0.37
SHMT2-224ENST00000556737 ZGPATQ8N5A5 531 aaKnown RBP12.73□□□□□ -0.37
SHMT2-224ENST00000556737 SPATA5Q8NB90 893 aa12.73□□□□□ -0.37
SHMT2-224ENST00000556737 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.73□□□□□ -0.378e-7■■□□□ 11.7
SHMT2-224ENST00000556737 DBNDD2Q9BQY9 259 aa12.73□□□□□ -0.37
SHMT2-224ENST00000556737 TLR7Q9NYK1 1049 aaKnown RBP12.73□□□□□ -0.37
SHMT2-224ENST00000556737 TMOD2Q9NZR1 351 aa12.73□□□□□ -0.37
SHMT2-224ENST00000556737 CDK5RAP2Q96SN8 1893 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 FOCADQ5VW36 1801 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 MROH7-TTC4A0A0A0MT08 1334 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 TRPA1O75762 1119 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 ZBTB48P10074 688 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-224ENST00000556737 TM4SF4P48230 202 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 MECOMQ03112 1051 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 OS9Q13438 667 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-224ENST00000556737 VGLL4Q14135 290 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-224ENST00000556737 ANKRD13AQ8IZ07 590 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 ABCF2Q9UG63 623 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 DBNLQ9UJU6 430 aaKnown RBP12.72□□□□□ -0.37
SHMT2-224ENST00000556737 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
SHMT2-224ENST00000556737 SREBF2Q12772 1141 aa12.71□□□□□ -0.37
SHMT2-224ENST00000556737 GORABQ5T7V8 394 aa12.71□□□□□ -0.37
SHMT2-224ENST00000556737 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
SHMT2-224ENST00000556737 DZIP1Q86YF9 867 aaKnown RBP12.71□□□□□ -0.37
SHMT2-224ENST00000556737 SIRT2Q8IXJ6 389 aa12.71□□□□□ -0.37
SHMT2-224ENST00000556737 FAM151AQ8WW52 585 aa12.71□□□□□ -0.37
SHMT2-224ENST00000556737 EAF2Q96CJ1 260 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-224ENST00000556737 FAM163AQ96GL9 167 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-224ENST00000556737 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
SHMT2-224ENST00000556737 SNCAIPQ9Y6H5 919 aa12.71□□□□□ -0.37
SHMT2-224ENST00000556737 SIPA1L1O43166 1804 aa12.71□□□□□ -0.38
SHMT2-224ENST00000556737 WDHD1O75717 1129 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-224ENST00000556737 UQCRFS1P1P0C7P4 283 aa12.7□□□□□ -0.38
SHMT2-224ENST00000556737 BTDP43251 543 aa12.7□□□□□ -0.38
SHMT2-224ENST00000556737 RHBDL3P58872 404 aa12.7□□□□□ -0.38
SHMT2-224ENST00000556737 SPTY2D1Q68D10 685 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-224ENST00000556737 CNKSR2Q8WXI2 1034 aa12.7□□□□□ -0.38
SHMT2-224ENST00000556737 NSUN4Q96CB9 384 aaKnown RBP12.7□□□□□ -0.38
SHMT2-224ENST00000556737 SLC10A4Q96EP9 437 aa12.7□□□□□ -0.38
SHMT2-224ENST00000556737 ZNF512BQ96KM6 892 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-224ENST00000556737 CFHR5Q9BXR6 569 aa12.7□□□□□ -0.38
SHMT2-224ENST00000556737 IDI2Q9BXS1 227 aa12.7□□□□□ -0.38
SHMT2-224ENST00000556737 ELP3Q9H9T3 547 aa12.7□□□□□ -0.38
SHMT2-224ENST00000556737 DDX4Q9NQI0 724 aaKnown RBP12.7□□□□□ -0.38
SHMT2-224ENST00000556737 USP40Q9NVE5 1235 aa12.7□□□□□ -0.38
SHMT2-224ENST00000556737 DOCK1Q14185 1865 aa12.7□□□□□ -0.38
SHMT2-224ENST00000556737 MANSC4A6NHS7 340 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-224ENST00000556737 IGF2BP3O00425 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
SHMT2-224ENST00000556737 TCP10Q12799 353 aa12.69□□□□□ -0.38
SHMT2-224ENST00000556737 PDE3AQ14432 1141 aa12.69□□□□□ -0.38
SHMT2-224ENST00000556737 TTC39AQ5SRH9 613 aa12.69□□□□□ -0.38
SHMT2-224ENST00000556737 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
SHMT2-224ENST00000556737 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
SHMT2-224ENST00000556737 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
SHMT2-224ENST00000556737 OPTNQ96CV9 577 aa12.69□□□□□ -0.38
SHMT2-224ENST00000556737 WRNIP1Q96S55 665 aa12.69□□□□□ -0.38
SHMT2-224ENST00000556737 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
SHMT2-224ENST00000556737 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-224ENST00000556737 COL2A1P02458 1487 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-224ENST00000556737 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
SHMT2-224ENST00000556737 PHIPQ8WWQ0 1821 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 GPR75-ASB3A0A0A6YYF3 556 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 TESPA1A2RU30 521 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-224ENST00000556737 SPDYE5A6NIY4 337 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 CAPN15O75808 1086 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 TBC1D8O95759 1140 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 CYP2E1P05181 493 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-224ENST00000556737 RGS3P49796 1198 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 RPAP2Q8IXW5 612 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-224ENST00000556737 ABHD8Q96I13 439 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 CCDC8Q9H0W5 538 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-224ENST00000556737 AK9Q5TCS8 1911 aa12.68□□□□□ -0.38
SHMT2-224ENST00000556737 ENTPD3O75355 529 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 ZAP70P43403 619 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 NOM1Q5C9Z4 860 aaKnown RBP12.67□□□□□ -0.38
SHMT2-224ENST00000556737 CCDC158Q5M9N0 1113 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 DCAF15Q66K64 600 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 ERC1Q8IUD2 1116 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 RHPN1Q8TCX5 695 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 ZKSCAN4Q969J2 545 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-224ENST00000556737 HOOK2Q96ED9 719 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 MS4A4AQ96JQ5 239 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 PTPN18Q99952 460 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 ZNF341Q9BYN7 854 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 MCOLN1Q9GZU1 580 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 R3HDMLQ9H3Y0 253 aa12.67□□□□□ -0.38
SHMT2-224ENST00000556737 PIH1D3Q9NQM4 214 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms