RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 HSPA1BP0DMV9 641 aaKnown RBP13.13□□□□□ -0.31
GABRB3-211ENST00000556636 NF2P35240 595 aa13.13□□□□□ -0.31
GABRB3-211ENST00000556636 ZNF157P51786 506 aaPredicted RBP13.13□□□□□ -0.31
GABRB3-211ENST00000556636 RHBDL3P58872 404 aa13.13□□□□□ -0.31
GABRB3-211ENST00000556636 NFIAQ12857 509 aa13.13□□□□□ -0.31
GABRB3-211ENST00000556636 GRM1Q13255 1194 aa13.13□□□□□ -0.31
GABRB3-211ENST00000556636 DZIP1Q86YF9 867 aaKnown RBP13.13□□□□□ -0.31
GABRB3-211ENST00000556636 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
GABRB3-211ENST00000556636 PIH1D3Q9NQM4 214 aaKnown RBP13.13□□□□□ -0.31
GABRB3-211ENST00000556636 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
GABRB3-211ENST00000556636 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
GABRB3-211ENST00000556636 NDUFB9Q9Y6M9 179 aa13.13□□□□□ -0.31
GABRB3-211ENST00000556636 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
GABRB3-211ENST00000556636 SLC10A3P09131 477 aa13.12□□□□□ -0.31
GABRB3-211ENST00000556636 ARMC9Q7Z3E5 817 aa13.12□□□□□ -0.31
GABRB3-211ENST00000556636 RASAL3Q86YV0 1011 aa13.12□□□□□ -0.31
GABRB3-211ENST00000556636 ZFPM1Q8IX07 1006 aa13.12□□□□□ -0.31
GABRB3-211ENST00000556636 ANTXR1Q9H6X2 564 aa13.12□□□□□ -0.31
GABRB3-211ENST00000556636 LRP2BPQ9P2M1 347 aa13.12□□□□□ -0.31
GABRB3-211ENST00000556636 ANGEL1Q9UNK9 670 aaKnown RBP13.12□□□□□ -0.31
GABRB3-211ENST00000556636 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
GABRB3-211ENST00000556636 PPP1R12BO60237 982 aaPredicted RBP13.11□□□□□ -0.31
GABRB3-211ENST00000556636 WDHD1O75717 1129 aaPredicted RBP13.11□□□□□ -0.31
GABRB3-211ENST00000556636 BTDP43251 543 aa13.11□□□□□ -0.31
GABRB3-211ENST00000556636 TNNI2P48788 182 aa13.11□□□□□ -0.31
GABRB3-211ENST00000556636 NOGQ13253 232 aa13.11□□□□□ -0.31
GABRB3-211ENST00000556636 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
GABRB3-211ENST00000556636 SLF2Q8IX21 1173 aa13.11□□□□□ -0.31
GABRB3-211ENST00000556636 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.11□□□□□ -0.31
GABRB3-211ENST00000556636 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
GABRB3-211ENST00000556636 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
GABRB3-211ENST00000556636 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
GABRB3-211ENST00000556636 RAI14Q9P0K7 980 aa13.11□□□□□ -0.31
GABRB3-211ENST00000556636 AKAP11Q9UKA4 1901 aa13.1□□□□□ -0.31
GABRB3-211ENST00000556636 FOXN1O15353 648 aa13.1□□□□□ -0.31
GABRB3-211ENST00000556636 IGSF3O75054 1194 aa13.1□□□□□ -0.31
GABRB3-211ENST00000556636 LDHCP07864 332 aa13.1□□□□□ -0.31
GABRB3-211ENST00000556636 IFIT2P09913 472 aaKnown RBP13.1□□□□□ -0.31
GABRB3-211ENST00000556636 PPP4CP60510 307 aa13.1□□□□□ -0.31
GABRB3-211ENST00000556636 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
GABRB3-211ENST00000556636 MAP2K1Q02750 393 aaPredicted RBP13.1□□□□□ -0.31
GABRB3-211ENST00000556636 TCP10Q12799 353 aa13.1□□□□□ -0.31
GABRB3-211ENST00000556636 ADGRA1Q86SQ6 560 aa13.1□□□□□ -0.31
GABRB3-211ENST00000556636 CLMNQ96JQ2 1002 aa13.1□□□□□ -0.31
GABRB3-211ENST00000556636 CSRNP1Q96S65 589 aa13.1□□□□□ -0.31
GABRB3-211ENST00000556636 DDX4Q9NQI0 724 aaKnown RBP13.1□□□□□ -0.31
GABRB3-211ENST00000556636 TMOD2Q9NZR1 351 aa13.1□□□□□ -0.31
GABRB3-211ENST00000556636 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
GABRB3-211ENST00000556636 UNCXA6NJT0 531 aa13.09□□□□□ -0.31
GABRB3-211ENST00000556636 ATP5JP18859 108 aa13.09□□□□□ -0.31
GABRB3-211ENST00000556636 GSTO1P78417 241 aa13.09□□□□□ -0.31
GABRB3-211ENST00000556636 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-211ENST00000556636 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-211ENST00000556636 SH3BP5LQ7L8J4 393 aa13.09□□□□□ -0.31
GABRB3-211ENST00000556636 EXOC6Q8TAG9 804 aa13.09□□□□□ -0.31
GABRB3-211ENST00000556636 BCL11AQ9H165 835 aa13.09□□□□□ -0.31
GABRB3-211ENST00000556636 ECM29Q5VYK3 1845 aa13.09□□□□□ -0.31
GABRB3-211ENST00000556636 RFX7Q2KHR2 1363 aa13.08□□□□□ -0.31
GABRB3-211ENST00000556636 MYH13Q9UKX3 1938 aa13.08□□□□□ -0.32
GABRB3-211ENST00000556636 ENTPD3O75355 529 aa13.08□□□□□ -0.32
GABRB3-211ENST00000556636 NPM3O75607 178 aaKnown RBP13.08□□□□□ -0.32
GABRB3-211ENST00000556636 RGS3P49796 1198 aa13.08□□□□□ -0.32
GABRB3-211ENST00000556636 MAP3K10Q02779 954 aa13.08□□□□□ -0.32
GABRB3-211ENST00000556636 HDAC1Q13547 482 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-211ENST00000556636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.08□□□□□ -0.32
GABRB3-211ENST00000556636 EDC3Q96F86 508 aaKnown RBP13.08□□□□□ -0.32
GABRB3-211ENST00000556636 DDTLA6NHG4 134 aaPredicted RBP13.07□□□□□ -0.32
GABRB3-211ENST00000556636 MAP4K4O95819 1239 aaPredicted RBP13.07□□□□□ -0.32
GABRB3-211ENST00000556636 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
GABRB3-211ENST00000556636 GJA5P36382 358 aa13.07□□□□□ -0.32
GABRB3-211ENST00000556636 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
GABRB3-211ENST00000556636 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
GABRB3-211ENST00000556636 AAMPQ13685 434 aa13.07□□□□□ -0.32
GABRB3-211ENST00000556636 SPRYD7Q5W111 196 aa13.07□□□□□ -0.32
GABRB3-211ENST00000556636 MIGA2Q7L4E1 593 aa13.07□□□□□ -0.32
GABRB3-211ENST00000556636 ANKRD13AQ8IZ07 590 aa13.07□□□□□ -0.32
GABRB3-211ENST00000556636 SLC10A4Q96EP9 437 aa13.07□□□□□ -0.32
GABRB3-211ENST00000556636 BOLA2Q9H3K6 86 aa13.07□□□□□ -0.32
GABRB3-211ENST00000556636 RPAP1Q9BWH6 1393 aaPredicted RBP13.07□□□□□ -0.32
GABRB3-211ENST00000556636 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
GABRB3-211ENST00000556636 CYP7A1P22680 504 aa13.06□□□□□ -0.32
GABRB3-211ENST00000556636 TM4SF4P48230 202 aa13.06□□□□□ -0.32
GABRB3-211ENST00000556636 DYNLL1P63167 89 aaKnown RBP13.06□□□□□ -0.32
GABRB3-211ENST00000556636 MAGEB6Q8N7X4 407 aa13.06□□□□□ -0.32
GABRB3-211ENST00000556636 SH3RF3Q8TEJ3 882 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-211ENST00000556636 HAUS7Q99871 368 aa13.06□□□□□ -0.32
GABRB3-211ENST00000556636 AATFQ9NY61 560 aaKnown RBP eCLIP13.06□□□□□ -0.32
GABRB3-211ENST00000556636 ZNF112Q9UJU3 913 aa13.06□□□□□ -0.32
GABRB3-211ENST00000556636 ATRNL1Q5VV63 1379 aa13.06□□□□□ -0.32
GABRB3-211ENST00000556636 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
GABRB3-211ENST00000556636 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
GABRB3-211ENST00000556636 GOLIM4O00461 696 aa13.05□□□□□ -0.32
GABRB3-211ENST00000556636 IGHDP01880 384 aa13.05□□□□□ -0.32
GABRB3-211ENST00000556636 HSPA8P11142 646 aaKnown RBP13.05□□□□□ -0.32
GABRB3-211ENST00000556636 MAP3K12Q12852 859 aa13.05□□□□□ -0.32
GABRB3-211ENST00000556636 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
GABRB3-211ENST00000556636 TTF1Q15361 905 aaPredicted RBP13.05□□□□□ -0.32
GABRB3-211ENST00000556636 OTUD7AQ8TE49 926 aaPredicted RBP13.05□□□□□ -0.32
GABRB3-211ENST00000556636 WNK4Q96J92 1243 aa13.05□□□□□ -0.32
GABRB3-211ENST00000556636 DNAJC2Q99543 621 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms