RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 ZNF862O60290 1169 aa7.5□□□□□ -1.21
PCNX1-212ENST00000556516 GAL3ST3Q96A11 431 aa7.5□□□□□ -1.21
PCNX1-212ENST00000556516 ACSBG1Q96GR2 724 aa7.5□□□□□ -1.21
PCNX1-212ENST00000556516 RUSC1Q9BVN2 902 aa7.5□□□□□ -1.21
PCNX1-212ENST00000556516 SAMM50Q9Y512 469 aa7.5□□□□□ -1.21
PCNX1-212ENST00000556516 FAM181BA6NEQ2 426 aa7.49□□□□□ -1.21
PCNX1-212ENST00000556516 LMNB1P20700 586 aa7.49□□□□□ -1.21
PCNX1-212ENST00000556516 CAMK2GQ13555 558 aaPredicted RBP7.49□□□□□ -1.21
PCNX1-212ENST00000556516 FBXL19Q6PCT2 694 aa7.49□□□□□ -1.21
PCNX1-212ENST00000556516 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.49□□□□□ -1.21
PCNX1-212ENST00000556516 GOLM1Q8NBJ4 401 aa7.49□□□□□ -1.21
PCNX1-212ENST00000556516 FBXO27Q8NI29 283 aa7.49□□□□□ -1.21
PCNX1-212ENST00000556516 EMILIN2Q9BXX0 1053 aa7.49□□□□□ -1.21
PCNX1-212ENST00000556516 STK17AQ9UEE5 414 aa7.49□□□□□ -1.21
PCNX1-212ENST00000556516 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.49□□□□□ -1.21
PCNX1-212ENST00000556516 KRBA1A5PL33 1030 aa7.48□□□□□ -1.21
PCNX1-212ENST00000556516 TLR3O15455 904 aaKnown RBP7.48□□□□□ -1.21
PCNX1-212ENST00000556516 DRD2P14416 443 aa7.48□□□□□ -1.21
PCNX1-212ENST00000556516 EIF4A3P38919 411 aaKnown RBP7.48□□□□□ -1.21
PCNX1-212ENST00000556516 RANGAP1P46060 587 aaPredicted RBP7.48□□□□□ -1.21
PCNX1-212ENST00000556516 AKAP4Q5JQC9 854 aa7.48□□□□□ -1.21
PCNX1-212ENST00000556516 SNAP47Q5SQN1 464 aa7.48□□□□□ -1.21
PCNX1-212ENST00000556516 IGF2-ASQ6U949 168 aa7.48□□□□□ -1.21
PCNX1-212ENST00000556516 WDR18Q9BV38 432 aa7.48□□□□□ -1.21
PCNX1-212ENST00000556516 MRPL18Q9H0U6 180 aaKnown RBP7.48□□□□□ -1.21
PCNX1-212ENST00000556516 MIR1-1HGQ9H1L0 117 aa7.48□□□□□ -1.21
PCNX1-212ENST00000556516 CCSER2Q9H7U1 834 aa7.48□□□□□ -1.21
PCNX1-212ENST00000556516 CSADQ9Y600 493 aa7.48□□□□□ -1.21
PCNX1-212ENST00000556516 F8W735 103 aaPredicted RBP7.47□□□□□ -1.21
PCNX1-212ENST00000556516 APBA3O96018 575 aa7.47□□□□□ -1.21
PCNX1-212ENST00000556516 F13A1P00488 732 aa7.47□□□□□ -1.21
PCNX1-212ENST00000556516 GARTP22102 1010 aa7.47□□□□□ -1.21
PCNX1-212ENST00000556516 CHRNA4P43681 627 aa7.47□□□□□ -1.21
PCNX1-212ENST00000556516 CRKP46108 304 aa7.47□□□□□ -1.21
PCNX1-212ENST00000556516 RPS26P62854 115 aaKnown RBP7.47□□□□□ -1.21
PCNX1-212ENST00000556516 UBP1Q9NZI7 540 aa7.47□□□□□ -1.21
PCNX1-212ENST00000556516 PCDHA4Q9UN74 947 aa7.47□□□□□ -1.21
PCNX1-212ENST00000556516 CYP8B1Q9UNU6 501 aa7.47□□□□□ -1.21
PCNX1-212ENST00000556516 DCDC2CA8MYV0 355 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 AOC2O75106 756 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 RLBP1P12271 317 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 NOS3P29474 1203 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 IREB2P48200 963 aaKnown RBP7.46□□□□□ -1.22
PCNX1-212ENST00000556516 LMNB2Q03252 620 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 PWP1Q13610 501 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 INPP5AQ14642 412 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 LRRC14Q15048 493 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 TRIM42Q8IWZ5 723 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 ZNF654Q8IZM8 581 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 ZNF296Q8WUU4 475 aaPredicted RBP7.46□□□□□ -1.22
PCNX1-212ENST00000556516 DCAF5Q96JK2 942 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 SPON2Q9BUD6 331 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 TMPRSS13Q9BYE2 586 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 TGIF2Q9GZN2 237 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 CAPN10Q9HC96 672 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 RAD18Q9NS91 495 aa7.46□□□□□ -1.22
PCNX1-212ENST00000556516 TRIM37O94972 964 aa7.45□□□□□ -1.22
PCNX1-212ENST00000556516 GLB1P16278 677 aa7.45□□□□□ -1.22
PCNX1-212ENST00000556516 PAK2Q13177 524 aa7.45□□□□□ -1.22
PCNX1-212ENST00000556516 MBTPS1Q14703 1052 aa7.45□□□□□ -1.22
PCNX1-212ENST00000556516 NUTM2GQ5VZR2 741 aa7.45□□□□□ -1.22
PCNX1-212ENST00000556516 KIAA0825Q8IV33 1275 aa7.45□□□□□ -1.22
PCNX1-212ENST00000556516 LENG1Q96BZ8 264 aaPredicted RBP7.45□□□□□ -1.22
PCNX1-212ENST00000556516 EAF1Q96JC9 268 aaPredicted RBP7.45□□□□□ -1.22
PCNX1-212ENST00000556516 AKTIPQ9H8T0 292 aa7.45□□□□□ -1.22
PCNX1-212ENST00000556516 PPP1R9AQ9ULJ8 1098 aa7.45□□□□□ -1.22
PCNX1-212ENST00000556516 AP4E1Q9UPM8 1137 aa7.45□□□□□ -1.22
PCNX1-212ENST00000556516 PREPP48147 710 aa7.44□□□□□ -1.22
PCNX1-212ENST00000556516 GSK3AP49840 483 aa7.44□□□□□ -1.22
PCNX1-212ENST00000556516 WIPI1Q5MNZ9 446 aaPredicted RBP7.44□□□□□ -1.22
PCNX1-212ENST00000556516 EXOSC6Q5RKV6 272 aaKnown RBP7.44□□□□□ -1.22
PCNX1-212ENST00000556516 LRFN4Q6PJG9 635 aa7.44□□□□□ -1.22
PCNX1-212ENST00000556516 CD163Q86VB7 1156 aa7.44□□□□□ -1.22
PCNX1-212ENST00000556516 C12orf40Q86WS4 652 aa7.44□□□□□ -1.22
PCNX1-212ENST00000556516 WFDC12Q8WWY7 111 aa7.44□□□□□ -1.22
PCNX1-212ENST00000556516 PLPPR2Q96GM1 343 aa7.44□□□□□ -1.22
PCNX1-212ENST00000556516 RNF208Q9H0X6 261 aa7.44□□□□□ -1.22
PCNX1-212ENST00000556516 CACNA2D2Q9NY47 1150 aa7.44□□□□□ -1.22
PCNX1-212ENST00000556516 C1QTNF9BB2RNN3 333 aa7.43□□□□□ -1.22
PCNX1-212ENST00000556516 RNF225M0QZC1 329 aaPredicted RBP7.43□□□□□ -1.22
PCNX1-212ENST00000556516 KIF4BQ2VIQ3 1234 aa7.43□□□□□ -1.22
PCNX1-212ENST00000556516 FDX2Q6P4F2 183 aa7.43□□□□□ -1.22
PCNX1-212ENST00000556516 C12orf50Q8NA57 414 aaPredicted RBP7.43□□□□□ -1.22
PCNX1-212ENST00000556516 DCAF11Q8TEB1 546 aa7.43□□□□□ -1.22
PCNX1-212ENST00000556516 MEGF10Q96KG7 1140 aa7.43□□□□□ -1.22
PCNX1-212ENST00000556516 KRT82Q9NSB4 513 aa7.43□□□□□ -1.22
PCNX1-212ENST00000556516 INPP5FQ9Y2H2 1132 aa7.43□□□□□ -1.22
PCNX1-212ENST00000556516 SUPT16HQ9Y5B9 1047 aaKnown RBP7.43□□□□□ -1.22
PCNX1-212ENST00000556516 PCDHGC5Q9Y5F6 944 aa7.43□□□□□ -1.22
PCNX1-212ENST00000556516 PRAMEF27A3QJZ7 478 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 FAM221AA4D161 298 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 TMPRSS2O15393 492 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 GRIN3BO60391 1043 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 ADH5P11766 374 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 RASSF7Q02833 373 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 ADGRE1Q14246 886 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 FAM196AQ6ZSG2 479 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 DYMQ7RTS9 669 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 GATAD2BQ8WXI9 593 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 NACC1Q96RE7 527 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms