RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CCL15-CCL14A0A0B4J2E2 113 aa28.02■■■□□ 2.08
ACTN1-220ENST00000556433 TFCP2Q12800 502 aa28.02■■■□□ 2.08
ACTN1-220ENST00000556433 MTX1Q13505 466 aa28.02■■■□□ 2.08
ACTN1-220ENST00000556433 CCL15Q16663 113 aa28.02■■■□□ 2.08
ACTN1-220ENST00000556433 BRI3BPQ8WY22 251 aa28.02■■■□□ 2.08
ACTN1-220ENST00000556433 ZKSCAN4Q969J2 545 aaPredicted RBP28.02■■■□□ 2.08
ACTN1-220ENST00000556433 CLUAP1Q96AJ1 413 aa28.02■■■□□ 2.08
ACTN1-220ENST00000556433 USP40Q9NVE5 1235 aa28.02■■■□□ 2.08
ACTN1-220ENST00000556433 TRIM17Q9Y577 477 aa28.02■■■□□ 2.08
ACTN1-220ENST00000556433 SPDYE5A6NIY4 337 aa28.01■■■□□ 2.07
ACTN1-220ENST00000556433 TCP10Q12799 353 aa28.01■■■□□ 2.07
ACTN1-220ENST00000556433 MIGA2Q7L4E1 593 aa28.01■■■□□ 2.07
ACTN1-220ENST00000556433 AKAP2Q9Y2D5 859 aa28.01■■■□□ 2.07
ACTN1-220ENST00000556433 SNCAIPQ9Y6H5 919 aa28.01■■■□□ 2.07
ACTN1-220ENST00000556433 OTOFQ9HC10 1997 aa28■■■□□ 2.07
ACTN1-220ENST00000556433 ZBTB22O15209 634 aa28■■■□□ 2.07
ACTN1-220ENST00000556433 GNAI2P04899 355 aa28■■■□□ 2.07
ACTN1-220ENST00000556433 ERO1AQ96HE7 468 aa28■■■□□ 2.07
ACTN1-220ENST00000556433 ZNF341Q9BYN7 854 aa28■■■□□ 2.07
ACTN1-220ENST00000556433 MYH13Q9UKX3 1938 aa27.99■■■□□ 2.07
ACTN1-220ENST00000556433 A0A1B0GUL7 405 aa27.99■■■□□ 2.07
ACTN1-220ENST00000556433 NFIAQ12857 509 aa27.99■■■□□ 2.07
ACTN1-220ENST00000556433 OTOP1Q7RTM1 612 aa27.99■■■□□ 2.07
ACTN1-220ENST00000556433 ERO1BQ86YB8 467 aa27.99■■■□□ 2.07
ACTN1-220ENST00000556433 ZGPATQ8N5A5 531 aaKnown RBP27.99■■■□□ 2.07
ACTN1-220ENST00000556433 XAGE2Q96GT9 111 aa27.99■■■□□ 2.07
ACTN1-220ENST00000556433 RPAP1Q9BWH6 1393 aaPredicted RBP27.99■■■□□ 2.07
ACTN1-220ENST00000556433 RASGRF1Q13972 1273 aa27.98■■■□□ 2.07
ACTN1-220ENST00000556433 MIER1Q8N108 512 aa27.98■■■□□ 2.07
ACTN1-220ENST00000556433 CD99L2Q8TCZ2 262 aa27.98■■■□□ 2.07
ACTN1-220ENST00000556433 ABCF2Q9UG63 623 aa27.98■■■□□ 2.07
ACTN1-220ENST00000556433 HNRNPUQ00839 825 aaKnown RBP eCLIP27.97■■■□□ 2.073e-7■■□□□ 13
ACTN1-220ENST00000556433 SP3Q02447 781 aa27.97■■■□□ 2.07
ACTN1-220ENST00000556433 NEUROD6Q96NK8 337 aa27.97■■■□□ 2.07
ACTN1-220ENST00000556433 ZFYVE28Q9HCC9 887 aa27.97■■■□□ 2.07
ACTN1-220ENST00000556433 LAMB1P07942 1786 aa27.96■■■□□ 2.07
ACTN1-220ENST00000556433 MVPQ14764 893 aaKnown RBP27.96■■■□□ 2.07
ACTN1-220ENST00000556433 TAF1CQ15572 869 aaPredicted RBP27.96■■■□□ 2.07
ACTN1-220ENST00000556433 ZKSCAN2Q63HK3 967 aa27.96■■■□□ 2.07
ACTN1-220ENST00000556433 FAM43AQ8N2R8 423 aa27.96■■■□□ 2.07
ACTN1-220ENST00000556433 FAM198AQ9UFP1 575 aa27.96■■■□□ 2.07
ACTN1-220ENST00000556433 IRF6O14896 467 aa27.95■■■□□ 2.06
ACTN1-220ENST00000556433 CETPP11597 493 aa27.95■■■□□ 2.06
ACTN1-220ENST00000556433 INPP5BP32019 993 aa27.95■■■□□ 2.06
ACTN1-220ENST00000556433 DZIP1Q86YF9 867 aaKnown RBP27.95■■■□□ 2.06
ACTN1-220ENST00000556433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.95■■■□□ 2.06
ACTN1-220ENST00000556433 PNMA6EA0A0J9YXQ4 647 aa27.94■■■□□ 2.06
ACTN1-220ENST00000556433 G3BP1Q13283 466 aaKnown RBP eCLIP27.94■■■□□ 2.062e-8■■□□□ 12.5
ACTN1-220ENST00000556433 PPIL2Q13356 520 aa27.94■■■□□ 2.06
ACTN1-220ENST00000556433 SNAPC2Q13487 334 aa27.94■■■□□ 2.06
ACTN1-220ENST00000556433 SPTY2D1Q68D10 685 aaPredicted RBP27.94■■■□□ 2.06
ACTN1-220ENST00000556433 TMEM57Q8N5G2 664 aa27.94■■■□□ 2.06
ACTN1-220ENST00000556433 EFCC1Q9HA90 598 aa27.94■■■□□ 2.06
ACTN1-220ENST00000556433 PDS5AQ29RF7 1337 aaKnown RBP27.93■■■□□ 2.06
ACTN1-220ENST00000556433 SLC34A2O95436 690 aa27.93■■■□□ 2.06
ACTN1-220ENST00000556433 ZFPM1Q8IX07 1006 aa27.93■■■□□ 2.06
ACTN1-220ENST00000556433 SLF2Q8IX21 1173 aa27.93■■■□□ 2.06
ACTN1-220ENST00000556433 ZNF112Q9UJU3 913 aa27.93■■■□□ 2.06
ACTN1-220ENST00000556433 WDHD1O75717 1129 aaPredicted RBP27.92■■■□□ 2.06
ACTN1-220ENST00000556433 PPATQ06203 517 aa27.92■■■□□ 2.06
ACTN1-220ENST00000556433 GORABQ5T7V8 394 aa27.92■■■□□ 2.06
ACTN1-220ENST00000556433 DIEXFQ68CQ4 756 aaKnown RBP27.92■■■□□ 2.06
ACTN1-220ENST00000556433 PTPN22Q9Y2R2 807 aa27.92■■■□□ 2.06
ACTN1-220ENST00000556433 GAKO14976 1311 aa27.92■■■□□ 2.06
ACTN1-220ENST00000556433 BTBD19C9JJ37 291 aa27.91■■■□□ 2.06
ACTN1-220ENST00000556433 FAM163AQ96GL9 167 aaPredicted RBP27.91■■■□□ 2.06
ACTN1-220ENST00000556433 IDI2Q9BXS1 227 aa27.91■■■□□ 2.06
ACTN1-220ENST00000556433 RGS3P49796 1198 aa27.9■■■□□ 2.06
ACTN1-220ENST00000556433 ERICH6Q7L0X2 663 aa27.9■■■□□ 2.06
ACTN1-220ENST00000556433 ENTPD3O75355 529 aa27.89■■■□□ 2.06
ACTN1-220ENST00000556433 CAP1Q01518 475 aa27.89■■■□□ 2.06
ACTN1-220ENST00000556433 ZCCHC17Q9NP64 241 aaKnown RBP27.89■■■□□ 2.06
ACTN1-220ENST00000556433 HMG20BQ9P0W2 317 aa27.89■■■□□ 2.06
ACTN1-220ENST00000556433 AK9Q5TCS8 1911 aa27.88■■■□□ 2.05
ACTN1-220ENST00000556433 BTDP43251 543 aa27.88■■■□□ 2.05
ACTN1-220ENST00000556433 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.88■■■□□ 2.05
ACTN1-220ENST00000556433 MECOMQ03112 1051 aa27.87■■■□□ 2.05
ACTN1-220ENST00000556433 ARHGEF6Q15052 776 aa27.87■■■□□ 2.05
ACTN1-220ENST00000556433 ZSCAN29Q8IWY8 852 aaPredicted RBP27.87■■■□□ 2.05
ACTN1-220ENST00000556433 SPATA5Q8NB90 893 aa27.87■■■□□ 2.05
ACTN1-220ENST00000556433 TLR2O60603 784 aa27.86■■■□□ 2.05
ACTN1-220ENST00000556433 ATP8B2P98198 1209 aa27.86■■■□□ 2.05
ACTN1-220ENST00000556433 NOL9Q5SY16 702 aaKnown RBP27.86■■■□□ 2.05
ACTN1-220ENST00000556433 TBC1D9Q6ZT07 1266 aa27.86■■■□□ 2.05
ACTN1-220ENST00000556433 MYH2Q9UKX2 1941 aa27.86■■■□□ 2.05
ACTN1-220ENST00000556433 MROH7-TTC4A0A0A0MT08 1334 aa27.86■■■□□ 2.05
ACTN1-220ENST00000556433 PI16Q6UXB8 463 aa27.85■■■□□ 2.05
ACTN1-220ENST00000556433 SH3BP5LQ7L8J4 393 aa27.85■■■□□ 2.05
ACTN1-220ENST00000556433 FTSJ3Q8IY81 847 aaKnown RBP27.85■■■□□ 2.05
ACTN1-220ENST00000556433 GPR75-ASB3A0A0A6YYF3 556 aa27.84■■■□□ 2.05
ACTN1-220ENST00000556433 ARID4AP29374 1257 aaPredicted RBP27.84■■■□□ 2.05
ACTN1-220ENST00000556433 PICALMQ13492 652 aa27.84■■■□□ 2.05
ACTN1-220ENST00000556433 POLA2Q14181 598 aa27.84■■■□□ 2.05
ACTN1-220ENST00000556433 DDX4Q9NQI0 724 aaKnown RBP27.84■■■□□ 2.05
ACTN1-220ENST00000556433 KCNH4Q9UQ05 1017 aa27.84■■■□□ 2.05
ACTN1-220ENST00000556433 LDHCP07864 332 aa27.83■■■□□ 2.05
ACTN1-220ENST00000556433 UQCRFS1P1P0C7P4 283 aa27.83■■■□□ 2.05
ACTN1-220ENST00000556433 GSTO1P78417 241 aa27.83■■■□□ 2.05
ACTN1-220ENST00000556433 OS9Q13438 667 aaPredicted RBP27.83■■■□□ 2.05
ACTN1-220ENST00000556433 SSH3Q8TE77 659 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 344.6 ms