RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 EVI5O60447 810 aa17.6■□□□□ 0.41
ACTN1-219ENST00000556432 INPP5BP32019 993 aa17.6■□□□□ 0.41
ACTN1-219ENST00000556432 FCGRTP55899 365 aa17.6■□□□□ 0.41
ACTN1-219ENST00000556432 PRKCZQ05513 592 aa17.6■□□□□ 0.41
ACTN1-219ENST00000556432 UBE2Q1Q7Z7E8 422 aa17.6■□□□□ 0.41
ACTN1-219ENST00000556432 FAM83AQ86UY5 434 aa17.6■□□□□ 0.41
ACTN1-219ENST00000556432 U2AF1L4Q8WU68 220 aaKnown RBP17.6■□□□□ 0.41
ACTN1-219ENST00000556432 CUL9Q8IWT3 2517 aa17.59■□□□□ 0.41
ACTN1-219ENST00000556432 MAST3O60307 1309 aa17.59■□□□□ 0.41
ACTN1-219ENST00000556432 MROH5Q6ZUA9 1318 aa17.59■□□□□ 0.41
ACTN1-219ENST00000556432 SLAIN1Q8ND83 568 aa17.59■□□□□ 0.41
ACTN1-219ENST00000556432 ZDHHC15Q96MV8 337 aa17.59■□□□□ 0.41
ACTN1-219ENST00000556432 PARK7Q99497 189 aaKnown RBP17.59■□□□□ 0.41
ACTN1-219ENST00000556432 PRO3102Q9H379 93 aa17.59■□□□□ 0.41
ACTN1-219ENST00000556432 FANCIQ9NVI1 1328 aa17.58■□□□□ 0.4
ACTN1-219ENST00000556432 FKBP1CQ5VVH2 108 aa17.58■□□□□ 0.4
ACTN1-219ENST00000556432 FBXO33Q7Z6M2 555 aa17.58■□□□□ 0.4
ACTN1-219ENST00000556432 UNC93B1Q9H1C4 597 aa17.58■□□□□ 0.4
ACTN1-219ENST00000556432 RPAP1Q9BWH6 1393 aaPredicted RBP17.57■□□□□ 0.4
ACTN1-219ENST00000556432 IL16Q14005 1332 aa17.57■□□□□ 0.4
ACTN1-219ENST00000556432 ADGRA2Q96PE1 1338 aa17.57■□□□□ 0.4
ACTN1-219ENST00000556432 CCDC27Q2M243 656 aa17.57■□□□□ 0.4
ACTN1-219ENST00000556432 METTL24Q5JXM2 366 aa17.57■□□□□ 0.4
ACTN1-219ENST00000556432 APOBEC3HQ6NTF7 200 aaKnown RBP17.57■□□□□ 0.4
ACTN1-219ENST00000556432 SLC4A10Q6U841 1118 aa17.57■□□□□ 0.4
ACTN1-219ENST00000556432 A0A1W2PPC1 479 aa17.56■□□□□ 0.4
ACTN1-219ENST00000556432 SOX1O00570 391 aaPredicted RBP17.56■□□□□ 0.4
ACTN1-219ENST00000556432 TFRCP02786 760 aaKnown RBP17.56■□□□□ 0.4
ACTN1-219ENST00000556432 CYP2C8P10632 490 aa17.56■□□□□ 0.4
ACTN1-219ENST00000556432 TCP10Q12799 353 aa17.56■□□□□ 0.4
ACTN1-219ENST00000556432 LRCH3Q96II8 777 aa17.56■□□□□ 0.4
ACTN1-219ENST00000556432 TAOK2Q9UL54 1235 aa17.56■□□□□ 0.4
ACTN1-219ENST00000556432 KCNH4Q9UQ05 1017 aa17.56■□□□□ 0.4
ACTN1-219ENST00000556432 A0A0C4DFX4 3053 aa17.56■□□□□ 0.4
ACTN1-219ENST00000556432 CACNA1FO60840 1977 aa17.56■□□□□ 0.4
ACTN1-219ENST00000556432 ADCY3O60266 1144 aa17.55■□□□□ 0.4
ACTN1-219ENST00000556432 VAMP4O75379 141 aa17.55■□□□□ 0.4
ACTN1-219ENST00000556432 SGPL1O95470 568 aa17.55■□□□□ 0.4
ACTN1-219ENST00000556432 BCAMP50895 628 aa17.55■□□□□ 0.4
ACTN1-219ENST00000556432 SUCLG2Q96I99 432 aa17.55■□□□□ 0.4
ACTN1-219ENST00000556432 STAP2Q9UGK3 403 aa17.55■□□□□ 0.4
ACTN1-219ENST00000556432 GABRQQ9UN88 632 aa17.55■□□□□ 0.4
ACTN1-219ENST00000556432 INHAP05111 366 aa17.54■□□□□ 0.4
ACTN1-219ENST00000556432 ELNP15502 786 aa17.54■□□□□ 0.4
ACTN1-219ENST00000556432 ZEB1P37275 1124 aaPredicted RBP17.54■□□□□ 0.4
ACTN1-219ENST00000556432 EXOSC9Q06265 439 aaKnown RBP17.54■□□□□ 0.4
ACTN1-219ENST00000556432 HHIPL2Q6UWX4 724 aa17.54■□□□□ 0.4
ACTN1-219ENST00000556432 DEFB118Q96PH6 123 aa17.54■□□□□ 0.4
ACTN1-219ENST00000556432 SRCIN1Q9C0H9 1055 aa17.54■□□□□ 0.4
ACTN1-219ENST00000556432 SUGT1Q9Y2Z0 365 aa17.54■□□□□ 0.4
ACTN1-219ENST00000556432 COL6A3P12111 3177 aa17.54■□□□□ 0.4
ACTN1-219ENST00000556432 AK9Q5TCS8 1911 aa17.53■□□□□ 0.4
ACTN1-219ENST00000556432 ALDH1L1O75891 902 aa17.53■□□□□ 0.4
ACTN1-219ENST00000556432 BCRP11274 1271 aa17.53■□□□□ 0.4
ACTN1-219ENST00000556432 FLT3LGP49771 235 aa17.53■□□□□ 0.4
ACTN1-219ENST00000556432 LRRC24Q50LG9 513 aa17.53■□□□□ 0.4
ACTN1-219ENST00000556432 FAM151AQ8WW52 585 aa17.53■□□□□ 0.4
ACTN1-219ENST00000556432 MRIQ9BWK5 157 aa17.53■□□□□ 0.4
ACTN1-219ENST00000556432 TNPO2O14787 897 aaKnown RBP17.52■□□□□ 0.4
ACTN1-219ENST00000556432 MOGSQ13724 837 aa17.52■□□□□ 0.4
ACTN1-219ENST00000556432 GADL1Q6ZQY3 521 aa17.52■□□□□ 0.4
ACTN1-219ENST00000556432 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-219ENST00000556432 PICK1Q9NRD5 415 aa17.52■□□□□ 0.4
ACTN1-219ENST00000556432 SALL2Q9Y467 1007 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-219ENST00000556432 LAMA3Q16787 3333 aa17.51■□□□□ 0.39
ACTN1-219ENST00000556432 CXCL11O14625 94 aa17.51■□□□□ 0.39
ACTN1-219ENST00000556432 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
ACTN1-219ENST00000556432 NOL9Q5SY16 702 aaKnown RBP17.51■□□□□ 0.39
ACTN1-219ENST00000556432 GPAT2Q6NUI2 795 aa17.51■□□□□ 0.39
ACTN1-219ENST00000556432 SMCR8Q8TEV9 937 aaPredicted RBP17.51■□□□□ 0.39
ACTN1-219ENST00000556432 BICC1Q9H694 974 aaKnown RBP17.51■□□□□ 0.39
ACTN1-219ENST00000556432 ZNF112Q9UJU3 913 aa17.51■□□□□ 0.39
ACTN1-219ENST00000556432 PDE8BO95263 885 aa17.5■□□□□ 0.39
ACTN1-219ENST00000556432 CDC42EP5Q6NZY7 148 aa17.5■□□□□ 0.39
ACTN1-219ENST00000556432 FASTKD5Q7L8L6 764 aaKnown RBP17.5■□□□□ 0.39
ACTN1-219ENST00000556432 PAWRQ96IZ0 340 aaKnown RBP17.5■□□□□ 0.39
ACTN1-219ENST00000556432 DAGLAQ9Y4D2 1042 aa17.5■□□□□ 0.39
ACTN1-219ENST00000556432 ZHX2Q9Y6X8 837 aa17.5■□□□□ 0.39
ACTN1-219ENST00000556432 MGAMO43451 1857 aa17.5■□□□□ 0.39
ACTN1-219ENST00000556432 NBPF7P0C2Y1 421 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-219ENST00000556432 MNX1P50219 401 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-219ENST00000556432 NFIAQ12857 509 aa17.49■□□□□ 0.39
ACTN1-219ENST00000556432 PUM3Q15397 648 aaKnown RBP17.49■□□□□ 0.39
ACTN1-219ENST00000556432 DIXDC1Q155Q3 683 aa17.49■□□□□ 0.39
ACTN1-219ENST00000556432 C7orf61Q8IZ16 206 aa17.49■□□□□ 0.39
ACTN1-219ENST00000556432 DEFB123Q8N688 67 aa17.49■□□□□ 0.39
ACTN1-219ENST00000556432 WDR66Q8TBY9 1149 aa17.49■□□□□ 0.39
ACTN1-219ENST00000556432 KAZALD1Q96I82 304 aa17.49■□□□□ 0.39
ACTN1-219ENST00000556432 NECAB2Q7Z6G3 386 aa17.48■□□□□ 0.39
ACTN1-219ENST00000556432 VGLL2Q8N8G2 317 aa17.48■□□□□ 0.39
ACTN1-219ENST00000556432 PXYLP1Q8TE99 480 aa17.48■□□□□ 0.39
ACTN1-219ENST00000556432 USP40Q9NVE5 1235 aa17.48■□□□□ 0.39
ACTN1-219ENST00000556432 ZMYND8Q9ULU4 1186 aaPredicted RBP17.48■□□□□ 0.39
ACTN1-219ENST00000556432 A0A0G2JLL6 359 aaPredicted RBP17.47■□□□□ 0.39
ACTN1-219ENST00000556432 CAPN2P17655 700 aa17.47■□□□□ 0.39
ACTN1-219ENST00000556432 PRRT2Q7Z6L0 340 aaPredicted RBP17.47■□□□□ 0.39
ACTN1-219ENST00000556432 SCYL3Q8IZE3 742 aa17.47■□□□□ 0.39
ACTN1-219ENST00000556432 KLHDC4Q8TBB5 520 aa17.47■□□□□ 0.39
ACTN1-219ENST00000556432 DIS3LQ8TF46 1054 aaKnown RBP17.47■□□□□ 0.39
ACTN1-219ENST00000556432 COA7Q96BR5 231 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms