RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 BLOC1S2Q6QNY1 142 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 ACSBG1Q96GR2 724 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 CDCA7Q9BWT1 371 aaPredicted RBP5.92□□□□□ -1.46
TMEM260-210ENST00000556422 CEP126Q9P2H0 1117 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 GABBR1Q9UBS5 961 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 TPX2Q9ULW0 747 aaKnown RBP5.92□□□□□ -1.46
TMEM260-210ENST00000556422 MTMR6Q9Y217 621 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 BTAF1O14981 1849 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 M0R2C6 588 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 IRS4O14654 1257 aaPredicted RBP5.92□□□□□ -1.46
TMEM260-210ENST00000556422 GADD45BO75293 160 aaPredicted RBP5.92□□□□□ -1.46
TMEM260-210ENST00000556422 PSMA5P28066 241 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 C16orf87Q6PH81 154 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 TMEM87AQ8NBN3 555 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 OSBP2Q969R2 916 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 ZSCAN31Q96LW9 406 aaPredicted RBP5.92□□□□□ -1.46
TMEM260-210ENST00000556422 TRERF1Q96PN7 1200 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 HELLSQ9NRZ9 838 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 ABCC12Q96J65 1359 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 BCL9LQ86UU0 1499 aa5.92□□□□□ -1.46
TMEM260-210ENST00000556422 TAF1LQ8IZX4 1826 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 RGL2O15211 777 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 CTAGE5O15320 804 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 F13A1P00488 732 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 HSPD1P10809 573 aaKnown RBP5.91□□□□□ -1.46
TMEM260-210ENST00000556422 CRKLP46109 303 aaKnown RBP5.91□□□□□ -1.46
TMEM260-210ENST00000556422 PUS10Q3MIT2 529 aaKnown RBP5.91□□□□□ -1.46
TMEM260-210ENST00000556422 DNAJC21Q5F1R6 531 aaKnown RBP5.91□□□□□ -1.46
TMEM260-210ENST00000556422 TTC30BQ8N4P2 665 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 PUF60Q9UHX1 559 aaKnown RBP5.91□□□□□ -1.46
TMEM260-210ENST00000556422 R3HCC1Q9Y3T6 440 aaKnown RBP5.91□□□□□ -1.46
TMEM260-210ENST00000556422 LOC102724428A0A0B4J2F2 783 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 KCNQ2O43526 872 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 MCAMP43121 646 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 SIK1P57059 783 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 BARGINQ6ZT62 677 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 STK11IPQ8N1F8 1099 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 DSCC1Q9BVC3 393 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 DONSONQ9NYP3 566 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 TRMT112Q9UI30 125 aaKnown RBP5.91□□□□□ -1.46
TMEM260-210ENST00000556422 CNPY2Q9Y2B0 182 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 THSD7AQ9UPZ6 1657 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 SBF2Q86WG5 1849 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 CAMTA2O94983 1202 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 MSNP26038 577 aaKnown RBP5.91□□□□□ -1.46
TMEM260-210ENST00000556422 MKRN3Q13064 507 aaKnown RBP5.91□□□□□ -1.46
TMEM260-210ENST00000556422 SUSD4Q5VX71 490 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 LDHAL6AQ6ZMR3 332 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 USP48Q86UV5 1035 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 NEK1Q96PY6 1258 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 TMX1Q9H3N1 280 aa5.91□□□□□ -1.46
TMEM260-210ENST00000556422 RNF113AO15541 343 aaKnown RBP5.9□□□□□ -1.46
TMEM260-210ENST00000556422 PDE8AO60658 829 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 CAPN2P17655 700 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 ATP6V1AP38606 617 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 ZAP70P43403 619 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 MECOMQ03112 1051 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 FAM212AQ96EL1 285 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 AGXT2Q9BYV1 514 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 CCDC87Q9NVE4 849 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 AKAP2Q9Y2D5 859 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 ATRNO75882 1429 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 COL24A1Q17RW2 1714 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 ECM29Q5VYK3 1845 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 C4AP0C0L4 1744 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 C4BP0C0L5 1744 aa5.9□□□□□ -1.46
TMEM260-210ENST00000556422 NUTM2BA6NNL0 878 aaPredicted RBP5.9□□□□□ -1.47
TMEM260-210ENST00000556422 NUTM2EB1AL46 878 aaPredicted RBP5.9□□□□□ -1.47
TMEM260-210ENST00000556422 PPP1R12AO14974 1030 aaPredicted RBP5.9□□□□□ -1.47
TMEM260-210ENST00000556422 CASQ1P31415 396 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 PDE6BP35913 854 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 FKBP4Q02790 459 aaKnown RBP eCLIP5.9□□□□□ -1.47
TMEM260-210ENST00000556422 KRT32Q14532 448 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 ATP2B3Q16720 1220 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 CDC37L1Q7L3B6 337 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 NUTM2AQ8IVF1 878 aaPredicted RBP5.9□□□□□ -1.47
TMEM260-210ENST00000556422 GTF3C6Q969F1 213 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 PUS7LQ9H0K6 701 aaKnown RBP5.9□□□□□ -1.47
TMEM260-210ENST00000556422 IQSEC3Q9UPP2 1182 aaPredicted RBP5.9□□□□□ -1.47
TMEM260-210ENST00000556422 NHSQ6T4R5 1651 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 LY75O60449 1722 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 UQCRHLA0A096LP55 91 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 CAND2O75155 1236 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 PDE8BO95263 885 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 UQCRHP07919 91 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 NAT1P18440 290 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 FGFR2P21802 821 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 EXOSC10Q01780 885 aaKnown RBP5.9□□□□□ -1.47
TMEM260-210ENST00000556422 CCDC158Q5M9N0 1113 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 TTLL5Q6EMB2 1281 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 Q6ZUG5 572 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 LRRC2Q9BYS8 371 aa5.9□□□□□ -1.47
TMEM260-210ENST00000556422 SYCE3A1L190 88 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 ANKRD18BA2A2Z9 1011 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 MBD3O95983 291 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 NEFHP12036 1026 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 ANKRD1Q15327 319 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 E2F5Q15329 346 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 METTL24Q5JXM2 366 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 TTC39AQ5SRH9 613 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms