RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 AK5Q9Y6K8 562 aa6.31□□□□□ -1.4
SUPT16H-206ENST00000556309 ECEL1O95672 775 aa6.3□□□□□ -1.4
SUPT16H-206ENST00000556309 EIF4BP23588 611 aaKnown RBP6.3□□□□□ -1.4
SUPT16H-206ENST00000556309 GSTT1P30711 240 aa6.3□□□□□ -1.4
SUPT16H-206ENST00000556309 DAB2P98082 770 aa6.3□□□□□ -1.4
SUPT16H-206ENST00000556309 PTPN12Q05209 780 aaKnown RBP6.3□□□□□ -1.4
SUPT16H-206ENST00000556309 TPTE2Q6XPS3 522 aa6.3□□□□□ -1.4
SUPT16H-206ENST00000556309 TRIM42Q8IWZ5 723 aa6.3□□□□□ -1.4
SUPT16H-206ENST00000556309 GIPC1O14908 333 aa6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 SART1O43290 800 aaKnown RBP6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 DLGAP3O95886 979 aa6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 B3GALT4O96024 378 aa6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 CTSBP07858 339 aa6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 OGFOD2Q6N063 350 aa6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 KIAA1211Q6ZU35 1233 aa6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 FAM20CQ8IXL6 584 aa6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 TRIM56Q9BRZ2 755 aaKnown RBP6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 ZC3H12CQ9C0D7 883 aaKnown RBP6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 PODXL2Q9NZ53 605 aa6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 PIM2Q9P1W9 311 aa6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 FAM8A1Q9UBU6 413 aa6.29□□□□□ -1.4
SUPT16H-206ENST00000556309 LOC100289279A0A1B0GTE1 492 aa6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 PRNPP04156 253 aa6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 XRCC5P13010 732 aaKnown RBP6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 MAOBP27338 520 aa6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 FGD1P98174 961 aa6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 RPS26P11Q5JNZ5 115 aaPredicted RBP6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 SHKBP1Q8TBC3 707 aa6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 FRMD6Q96NE9 622 aa6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 SRCIN1Q9C0H9 1055 aa6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 SOX17Q9H6I2 414 aaPredicted RBP6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 TTF2Q9UNY4 1162 aaKnown RBP6.28□□□□□ -1.4
SUPT16H-206ENST00000556309 HMX2A2RU54 273 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 ADAMTS4O75173 837 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 C8AP07357 584 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 ZNF16P17020 682 aaPredicted RBP6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 POU4F3Q15319 338 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 ZNF326Q5BKZ1 582 aaKnown RBP6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 MEI1Q5TIA1 1274 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 TMC4Q7Z404 712 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 VSIG10LQ86VR7 867 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 RGS22Q8NE09 1264 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 STK35Q8TDR2 534 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 NRSN2Q9GZP1 204 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 ATG3Q9NT62 314 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 TMEM39AQ9NV64 488 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 VTI1BQ9UEU0 232 aa6.27□□□□□ -1.41
SUPT16H-206ENST00000556309 PAGE1O75459 146 aa6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 CELA3AP09093 270 aa6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 CTSHP09668 335 aa6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 BEND4Q6ZU67 534 aa6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 CBLL1Q75N03 491 aa6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 AGBL5Q8NDL9 886 aa6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 NECAB3Q96P71 396 aaPredicted RBP6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 METTL22Q9BUU2 404 aaPredicted RBP6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 RUSC1Q9BVN2 902 aa6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 MRS2Q9HD23 443 aa6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 LEMD3Q9Y2U8 911 aa6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 CCDC9Q9Y3X0 531 aaKnown RBP6.26□□□□□ -1.41
SUPT16H-206ENST00000556309 ENC1O14682 589 aa6.25□□□□□ -1.41
SUPT16H-206ENST00000556309 SORBS3O60504 671 aa6.25□□□□□ -1.41
SUPT16H-206ENST00000556309 CYP11A1P05108 521 aa6.25□□□□□ -1.41
SUPT16H-206ENST00000556309 PPP2R3AQ06190 1150 aa6.25□□□□□ -1.41
SUPT16H-206ENST00000556309 ABI1Q8IZP0 508 aa6.25□□□□□ -1.41
SUPT16H-206ENST00000556309 DDX54Q8TDD1 881 aaKnown RBP6.25□□□□□ -1.41
SUPT16H-206ENST00000556309 CORO1BQ9BR76 489 aa6.25□□□□□ -1.41
SUPT16H-206ENST00000556309 RNF208Q9H0X6 261 aa6.25□□□□□ -1.41
SUPT16H-206ENST00000556309 KCNF1Q9H3M0 494 aa6.25□□□□□ -1.41
SUPT16H-206ENST00000556309 ZFYVE1Q9HBF4 777 aa6.25□□□□□ -1.41
SUPT16H-206ENST00000556309 EIF4EBP3O60516 100 aaPredicted RBP6.24□□□□□ -1.41
SUPT16H-206ENST00000556309 BMP3P12645 472 aa6.24□□□□□ -1.41
SUPT16H-206ENST00000556309 FOSL1P15407 271 aa6.24□□□□□ -1.41
SUPT16H-206ENST00000556309 ITGB5P18084 799 aa6.24□□□□□ -1.41
SUPT16H-206ENST00000556309 PDE3AQ14432 1141 aa6.24□□□□□ -1.41
SUPT16H-206ENST00000556309 MPRIPQ6WCQ1 1025 aa6.24□□□□□ -1.41
SUPT16H-206ENST00000556309 SULF2Q8IWU5 870 aa6.24□□□□□ -1.41
SUPT16H-206ENST00000556309 WDR89Q96FK6 387 aaPredicted RBP6.24□□□□□ -1.41
SUPT16H-206ENST00000556309 CBX8Q9HC52 389 aa6.24□□□□□ -1.41
SUPT16H-206ENST00000556309 PPM1HQ9ULR3 514 aa6.24□□□□□ -1.41
SUPT16H-206ENST00000556309 WDR64B1ANS9 1081 aa6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 DRD2P14416 443 aa6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 LIG1P18858 919 aa6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 AP3B2Q13367 1082 aa6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 MAP3K11Q16584 847 aa6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 RASIP1Q5U651 963 aa6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 NUTM2GQ5VZR2 741 aa6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 GRIN3AQ8TCU5 1115 aa6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 KCNB2Q92953 911 aa6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 CCDC86Q9H6F5 360 aaKnown RBP6.23□□□□□ -1.41
SUPT16H-206ENST00000556309 F6X3S4 739 aa6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 GSTP1P09211 210 aaKnown RBP6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 BMP6P22004 513 aa6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 NME2P22392 152 aa6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 ARNTP27540 789 aa6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 PREPP48147 710 aa6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 CCDC85BQ15834 202 aaPredicted RBP6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 AKAP4Q5JQC9 854 aa6.22□□□□□ -1.41
SUPT16H-206ENST00000556309 EXOSC6Q5RKV6 272 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms