RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 TBCELQ5QJ74 424 aa12.21□□□□□ -0.45
GTF2A1-204ENST00000556268 SLC9A9Q8IVB4 645 aa12.21□□□□□ -0.45
GTF2A1-204ENST00000556268 AIDAQ96BJ3 306 aa12.21□□□□□ -0.45
GTF2A1-204ENST00000556268 KIF13BQ9NQT8 1826 aa12.21□□□□□ -0.46
GTF2A1-204ENST00000556268 SFI1A8K8P3 1242 aa12.2□□□□□ -0.46
GTF2A1-204ENST00000556268 CRKLP46109 303 aaKnown RBP12.2□□□□□ -0.46
GTF2A1-204ENST00000556268 CRTC2Q53ET0 693 aaPredicted RBP12.2□□□□□ -0.46
GTF2A1-204ENST00000556268 SULT6B1Q6IMI4 303 aa12.2□□□□□ -0.46
GTF2A1-204ENST00000556268 TRERF1Q96PN7 1200 aa12.2□□□□□ -0.46
GTF2A1-204ENST00000556268 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
GTF2A1-204ENST00000556268 MYH14Q7Z406 1995 aaKnown RBP12.19□□□□□ -0.46
GTF2A1-204ENST00000556268 HSPA5P11021 654 aaKnown RBP12.19□□□□□ -0.46
GTF2A1-204ENST00000556268 DDR1Q08345 913 aa12.19□□□□□ -0.46
GTF2A1-204ENST00000556268 LBRQ14739 615 aaKnown RBP12.19□□□□□ -0.46
GTF2A1-204ENST00000556268 MORC1Q86VD1 984 aa12.19□□□□□ -0.46
GTF2A1-204ENST00000556268 ZDHHC1Q8WTX9 485 aa12.19□□□□□ -0.46
GTF2A1-204ENST00000556268 POLR3GLQ9BT43 218 aa12.19□□□□□ -0.46
GTF2A1-204ENST00000556268 CRISPLD1Q9H336 500 aa12.19□□□□□ -0.46
GTF2A1-204ENST00000556268 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
GTF2A1-204ENST00000556268 KIAA1551Q9HCM1 1747 aa12.19□□□□□ -0.46
GTF2A1-204ENST00000556268 USP42Q9H9J4 1324 aaKnown RBP12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 M0R2N6 131 aa12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 SLURP2P0DP57 97 aa12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 UBAP2LQ14157 1087 aaKnown RBP12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 C1orf141Q5JVX7 400 aa12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 C9orf131Q5VYM1 1079 aa12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 TSEN2Q8NCE0 465 aaKnown RBP12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 C1orf216Q8TAB5 229 aa12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 NMRK2Q9NPI5 230 aa12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 RBM19Q9Y4C8 960 aaKnown RBP12.18□□□□□ -0.46
GTF2A1-204ENST00000556268 PTK7Q13308 1070 aa12.17□□□□□ -0.46
GTF2A1-204ENST00000556268 AKAP4Q5JQC9 854 aa12.17□□□□□ -0.46
GTF2A1-204ENST00000556268 EFHC2Q5JST6 749 aa12.17□□□□□ -0.46
GTF2A1-204ENST00000556268 TSPAN10Q9H1Z9 355 aaPredicted RBP12.17□□□□□ -0.46
GTF2A1-204ENST00000556268 LGR6Q9HBX8 967 aa12.17□□□□□ -0.46
GTF2A1-204ENST00000556268 MBIPQ9NS73 344 aa12.17□□□□□ -0.46
GTF2A1-204ENST00000556268 FAM181BA6NEQ2 426 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L15C9J2P7 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L10C9JJH3 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L13C9JLJ4 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L12C9JPN9 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L11C9JVI0 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L21D6R901 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L18D6R9N7 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L22D6RA61 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L17D6RBQ6 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L19D6RCP7 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L20D6RJB6 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 POLRMTO00411 1230 aaKnown RBP12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 CYP19A1P11511 503 aaPredicted RBP12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 SRSF11Q05519 484 aaKnown RBP12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 USP17L24Q0WX57 530 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 SLC52A2Q9HAB3 445 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 ZDHHC3Q9NYG2 299 aa12.16□□□□□ -0.46
GTF2A1-204ENST00000556268 N4BP2Q86UW6 1770 aaPredicted RBP12.15□□□□□ -0.46
GTF2A1-204ENST00000556268 C4AP0C0L4 1744 aa12.15□□□□□ -0.46
GTF2A1-204ENST00000556268 TXLNAP40222 546 aa12.15□□□□□ -0.46
GTF2A1-204ENST00000556268 FSTL1Q12841 308 aa12.15□□□□□ -0.46
GTF2A1-204ENST00000556268 TEAD4Q15561 434 aa12.15□□□□□ -0.46
GTF2A1-204ENST00000556268 DNAJC10Q8IXB1 793 aa12.15□□□□□ -0.46
GTF2A1-204ENST00000556268 WHAMMQ8TF30 809 aa12.15□□□□□ -0.46
GTF2A1-204ENST00000556268 VRTNQ9H8Y1 702 aa12.15□□□□□ -0.46
GTF2A1-204ENST00000556268 KNSTRNQ9Y448 316 aa12.15□□□□□ -0.46
GTF2A1-204ENST00000556268 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
GTF2A1-204ENST00000556268 SOS1Q07889 1333 aaPredicted RBP12.14□□□□□ -0.47
GTF2A1-204ENST00000556268 FAM196BA6NMK8 535 aa12.14□□□□□ -0.47
GTF2A1-204ENST00000556268 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
GTF2A1-204ENST00000556268 CHRNA5P30532 468 aa12.14□□□□□ -0.47
GTF2A1-204ENST00000556268 SEC13P55735 322 aa12.14□□□□□ -0.47
GTF2A1-204ENST00000556268 ZNF385CQ66K41 422 aaPredicted RBP12.14□□□□□ -0.47
GTF2A1-204ENST00000556268 NARFQ9UHQ1 456 aa12.14□□□□□ -0.47
GTF2A1-204ENST00000556268 NOS2P35228 1153 aa12.13□□□□□ -0.47
GTF2A1-204ENST00000556268 DPYDQ12882 1025 aa12.13□□□□□ -0.47
GTF2A1-204ENST00000556268 NFIXQ14938 502 aa12.13□□□□□ -0.47
GTF2A1-204ENST00000556268 SH3PXD2AQ5TCZ1 1133 aa12.13□□□□□ -0.47
GTF2A1-204ENST00000556268 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
GTF2A1-204ENST00000556268 PCGF6Q9BYE7 350 aa12.13□□□□□ -0.47
GTF2A1-204ENST00000556268 ZNF232Q9UNY5 417 aa12.13□□□□□ -0.47
GTF2A1-204ENST00000556268 A0A1W2PNR3 127 aa12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 MX2P20592 715 aa12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 RFX1P22670 979 aa12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 SLC39A6Q13433 755 aa12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 ARSJQ5FYB0 599 aaPredicted RBP12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 SVOPQ8N4V2 548 aa12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 JMYQ8N9B5 988 aa12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 CFHR5Q9BXR6 569 aa12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 RRAGCQ9HB90 399 aa12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 BRCA1P38398 1863 aaKnown RBP12.12□□□□□ -0.47
GTF2A1-204ENST00000556268 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
GTF2A1-204ENST00000556268 SERTM1A2A2V5 107 aa12.11□□□□□ -0.47
GTF2A1-204ENST00000556268 EML1O00423 815 aa12.11□□□□□ -0.47
GTF2A1-204ENST00000556268 PSMA6P60900 246 aaKnown RBP12.11□□□□□ -0.47
GTF2A1-204ENST00000556268 ANKMY2Q8IV38 441 aa12.11□□□□□ -0.47
GTF2A1-204ENST00000556268 ABHD17AQ96GS6 310 aa12.11□□□□□ -0.47
GTF2A1-204ENST00000556268 RNF181Q9P0P0 153 aa12.11□□□□□ -0.47
GTF2A1-204ENST00000556268 PHF24Q9UPV7 400 aa12.11□□□□□ -0.47
GTF2A1-204ENST00000556268 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
GTF2A1-204ENST00000556268 SERPINB2P05120 415 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms