RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 CSF1RP07333 972 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 EN2P19622 333 aaPredicted RBP7.41□□□□□ -1.22
PRKCH-220ENST00000556164 GJA5P36382 358 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 CASP7P55210 303 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 SP3Q02447 781 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 TWISTNBQ3B726 338 aaPredicted RBP7.41□□□□□ -1.22
PRKCH-220ENST00000556164 WWC1Q8IX03 1113 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 ANKRD13AQ8IZ07 590 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 SP7Q8TDD2 431 aaPredicted RBP7.41□□□□□ -1.22
PRKCH-220ENST00000556164 ARMC5Q96C12 935 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 PRMT6Q96LA8 375 aaPredicted RBP7.41□□□□□ -1.22
PRKCH-220ENST00000556164 MYH16Q9H6N6 1097 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 ELP3Q9H9T3 547 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 CHMP3Q9Y3E7 222 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 AOX1Q06278 1338 aa7.41□□□□□ -1.22
PRKCH-220ENST00000556164 AK9Q5TCS8 1911 aa7.4□□□□□ -1.22
PRKCH-220ENST00000556164 USP2O75604 605 aaPredicted RBP7.4□□□□□ -1.22
PRKCH-220ENST00000556164 IFIT5Q13325 482 aaKnown RBP7.4□□□□□ -1.22
PRKCH-220ENST00000556164 FKBP5Q13451 457 aaPredicted RBP7.4□□□□□ -1.22
PRKCH-220ENST00000556164 TNFAIP1Q13829 316 aa7.4□□□□□ -1.22
PRKCH-220ENST00000556164 RASA3Q14644 834 aa7.4□□□□□ -1.22
PRKCH-220ENST00000556164 C15orf52Q6ZUT6 534 aaKnown RBP7.4□□□□□ -1.22
PRKCH-220ENST00000556164 DNAAF4Q8WXU2 420 aa7.4□□□□□ -1.22
PRKCH-220ENST00000556164 OPTNQ96CV9 577 aa7.4□□□□□ -1.22
PRKCH-220ENST00000556164 PTPN18Q99952 460 aa7.4□□□□□ -1.22
PRKCH-220ENST00000556164 TMEM106CQ9BVX2 250 aa7.4□□□□□ -1.22
PRKCH-220ENST00000556164 PRKRIP1Q9H875 184 aaPredicted RBP7.4□□□□□ -1.22
PRKCH-220ENST00000556164 GPHNQ9NQX3 736 aaPredicted RBP7.4□□□□□ -1.22
PRKCH-220ENST00000556164 IRS2Q9Y4H2 1338 aa7.4□□□□□ -1.22
PRKCH-220ENST00000556164 MYH13Q9UKX3 1938 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 PLIN1O60240 522 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 IL1R1P14778 569 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 FKBP1AP62942 108 aaKnown RBP7.39□□□□□ -1.23
PRKCH-220ENST00000556164 CAP1Q01518 475 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 TAF1CQ15572 869 aaPredicted RBP7.39□□□□□ -1.23
PRKCH-220ENST00000556164 SLC9C1Q4G0N8 1177 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 TAF7LQ5H9L4 462 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 SND1Q7KZF4 910 aaKnown RBP eCLIP7.39□□□□□ -1.23
PRKCH-220ENST00000556164 LINS1Q8NG48 757 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 MS4A4AQ96JQ5 239 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 IGSF5Q9NSI5 407 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 EMILIN3Q9NT22 766 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 PTCH2Q9Y6C5 1203 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 BRCA2P51587 3418 aa7.39□□□□□ -1.23
PRKCH-220ENST00000556164 CCL15-CCL14A0A0B4J2E2 113 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 TCP10L2B9ZVM9 353 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 MYCP01106 439 aaPredicted RBP7.38□□□□□ -1.23
PRKCH-220ENST00000556164 FXR1P51114 621 aaKnown RBP eCLIP7.38□□□□□ -1.23
PRKCH-220ENST00000556164 FOXO4P98177 505 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 ARHGEF6Q15052 776 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 CCL15Q16663 113 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 CCDC57Q2TAC2 916 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 SLC4A8Q2Y0W8 1093 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 MFSD14BQ5SR56 506 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 NBPF11Q86T75 865 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 CDAN1Q8IWY9 1227 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 BRI3BPQ8WY22 251 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 PBXIP1Q96AQ6 731 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 OTUD5Q96G74 571 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 ZNF594Q96JF6 807 aaPredicted RBP7.38□□□□□ -1.23
PRKCH-220ENST00000556164 ZNF333Q96JL9 665 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 TMUB1Q9BVT8 246 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 TDRD3Q9H7E2 651 aaKnown RBP7.38□□□□□ -1.23
PRKCH-220ENST00000556164 ZFYVE28Q9HCC9 887 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 CNNM1Q9NRU3 951 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 ZNF70Q9UC06 446 aaPredicted RBP7.38□□□□□ -1.23
PRKCH-220ENST00000556164 TTF2Q9UNY4 1162 aaKnown RBP7.38□□□□□ -1.23
PRKCH-220ENST00000556164 CSADQ9Y600 493 aa7.38□□□□□ -1.23
PRKCH-220ENST00000556164 F6X3S4 739 aa7.37□□□□□ -1.23
PRKCH-220ENST00000556164 GYG1P46976 350 aa7.37□□□□□ -1.23
PRKCH-220ENST00000556164 TNNI2P48788 182 aa7.37□□□□□ -1.23
PRKCH-220ENST00000556164 GTF2A2P52657 109 aa7.37□□□□□ -1.23
PRKCH-220ENST00000556164 VGLL4Q14135 290 aa7.37□□□□□ -1.23
PRKCH-220ENST00000556164 LMBR1LQ6UX01 489 aa7.37□□□□□ -1.23
PRKCH-220ENST00000556164 LDHAL6AQ6ZMR3 332 aa7.37□□□□□ -1.23
PRKCH-220ENST00000556164 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.37□□□□□ -1.23
PRKCH-220ENST00000556164 DZIP1LQ8IYY4 767 aaKnown RBP7.37□□□□□ -1.23
PRKCH-220ENST00000556164 FAM43AQ8N2R8 423 aa7.37□□□□□ -1.23
PRKCH-220ENST00000556164 CALR3Q96L12 384 aaKnown RBP7.37□□□□□ -1.23
PRKCH-220ENST00000556164 TEPSINQ96N21 525 aa7.37□□□□□ -1.23
PRKCH-220ENST00000556164 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.37□□□□□ -1.23
PRKCH-220ENST00000556164 TMEM39BQ9GZU3 492 aa7.37□□□□□ -1.23
PRKCH-220ENST00000556164 COLQQ9Y215 455 aaPredicted RBP7.37□□□□□ -1.23
PRKCH-220ENST00000556164 MGAMO43451 1857 aa7.36□□□□□ -1.23
PRKCH-220ENST00000556164 FAM205AQ6ZU69 1335 aa7.36□□□□□ -1.23
PRKCH-220ENST00000556164 WDHD1O75717 1129 aaPredicted RBP7.36□□□□□ -1.23
PRKCH-220ENST00000556164 CLCN1P35523 988 aa7.36□□□□□ -1.23
PRKCH-220ENST00000556164 CRKP46108 304 aa7.36□□□□□ -1.23
PRKCH-220ENST00000556164 MAP3K9P80192 1104 aa7.36□□□□□ -1.23
PRKCH-220ENST00000556164 KIF22Q14807 665 aa7.36□□□□□ -1.23
PRKCH-220ENST00000556164 EPHA10Q5JZY3 1008 aa7.36□□□□□ -1.23
PRKCH-220ENST00000556164 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.36□□□□□ -1.23
PRKCH-220ENST00000556164 TDRD7Q8NHU6 1098 aaKnown RBP7.36□□□□□ -1.23
PRKCH-220ENST00000556164 SH3TC2Q8TF17 1288 aa7.36□□□□□ -1.23
PRKCH-220ENST00000556164 TSPYL2Q9H2G4 693 aaPredicted RBP7.36□□□□□ -1.23
PRKCH-220ENST00000556164 TRIOBPQ9H2D6 2365 aa7.35□□□□□ -1.23
PRKCH-220ENST00000556164 IL16Q14005 1332 aa7.35□□□□□ -1.23
PRKCH-220ENST00000556164 FANCIQ9NVI1 1328 aa7.35□□□□□ -1.23
PRKCH-220ENST00000556164 CEP290O15078 2479 aa7.35□□□□□ -1.23
PRKCH-220ENST00000556164 H0YGN5 161 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms