RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.86
SUPT16H-204ENST00000555943 PRAMEF22A3QJZ6 481 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 AVPP01185 164 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 ATP2B4P23634 1241 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 EPHA4P54764 986 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 CLN3Q13286 438 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 OCLNQ16625 522 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 DNAJC10Q8IXB1 793 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 NLGN2Q8NFZ4 835 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 CNKSR1Q969H4 720 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 ESYT1Q9BSJ8 1104 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 RCAN3Q9UKA8 241 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 USP16Q9Y5T5 823 aa9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 COL5A3P25940 1745 aaPredicted RBP9.7□□□□□ -0.86
SUPT16H-204ENST00000555943 TCERG1O14776 1098 aaKnown RBP9.69□□□□□ -0.86
SUPT16H-204ENST00000555943 SIPA1L3O60292 1781 aaPredicted RBP9.69□□□□□ -0.86
SUPT16H-204ENST00000555943 ALDH1L2Q3SY69 923 aa9.69□□□□□ -0.86
SUPT16H-204ENST00000555943 MSL1Q68DK7 614 aa9.69□□□□□ -0.86
SUPT16H-204ENST00000555943 LINC00116Q8NCU8 138 aa9.69□□□□□ -0.86
SUPT16H-204ENST00000555943 CICQ96RK0 1608 aaPredicted RBP9.69□□□□□ -0.86
SUPT16H-204ENST00000555943 SMC4Q9NTJ3 1288 aa9.69□□□□□ -0.86
SUPT16H-204ENST00000555943 DBF4Q9UBU7 674 aaPredicted RBP9.69□□□□□ -0.86
SUPT16H-204ENST00000555943 RTCBQ9Y3I0 505 aaKnown RBP9.69□□□□□ -0.86
SUPT16H-204ENST00000555943 VIRMAQ69YN4 1812 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 CEP350Q5VT06 3117 aa9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 KCPQ6ZWJ8 1503 aa9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 CNTNAP4Q9C0A0 1308 aa9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 MEN1O00255 615 aa9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 NRG2O14511 850 aaPredicted RBP9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 CANXP27824 592 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 SMTNP53814 917 aa9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 RARSP54136 660 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 ITPK1Q13572 414 aa9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 TRAPPC3LQ5T215 181 aa9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 B4GALNT3Q6L9W6 998 aa9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 NLGN1Q8N2Q7 840 aa9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 TSEN34Q9BSV6 310 aaKnown RBP9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 KDM3BQ7LBC6 1761 aa9.68□□□□□ -0.86
SUPT16H-204ENST00000555943 ATP10DQ9P241 1426 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 ERBB4Q15303 1308 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 A6NJY4 79 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 DGAT1O75907 488 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 A1BGP04217 495 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 CYP19A1P11511 503 aaPredicted RBP9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 MYL6BP14649 208 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 WEE1P30291 646 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 CRKLP46109 303 aaKnown RBP9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 MTFR1Q15390 333 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 TLR1Q15399 786 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 LINC00528Q8N1L1 170 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 SSH1Q8WYL5 1049 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 BCL2L13Q9BXK5 485 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 TSPAN10Q9H1Z9 355 aaPredicted RBP9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 CCDC87Q9NVE4 849 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 HYPKQ9NX55 129 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 CXXC1Q9P0U4 656 aaPredicted RBP9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 CHPF2Q9P2E5 772 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 KIF13BQ9NQT8 1826 aa9.67□□□□□ -0.86
SUPT16H-204ENST00000555943 IPO8O15397 1037 aaKnown RBP9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 RPS6KA4O75676 772 aa9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 BCAR3O75815 825 aa9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 YBX3P16989 372 aaKnown RBP eCLIP9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 FOXK2Q01167 660 aa9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 CENPCQ03188 943 aa9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 KCNA1Q09470 495 aa9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 PKDCCQ504Y2 493 aa9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 FRAT1Q92837 279 aaPredicted RBP9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 NLRP3Q96P20 1036 aa9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 DDX21Q9NR30 783 aaKnown RBP eCLIP9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 SCHIP1Q9P0W5 487 aaPredicted RBP9.66□□□□□ -0.86
SUPT16H-204ENST00000555943 KIF16BQ96L93 1317 aa9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 SPINT1O43278 529 aa9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 C21orf2O43822 256 aa9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 DDX58O95786 925 aaKnown RBP9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 ANXA1P04083 346 aa9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 RFC4P35249 363 aa9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 SCNN1AP37088 669 aa9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 PIP4K2AP48426 406 aaPredicted RBP9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 TGFB2P61812 414 aa9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 AIMP1Q12904 312 aaKnown RBP9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 AMIGO3Q86WK7 504 aa9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 SLC9A9Q8IVB4 645 aa9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 SCG3Q8WXD2 468 aaKnown RBP9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 PURBQ96QR8 312 aaKnown RBP9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 INSM2Q96T92 566 aaPredicted RBP9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 USP3Q9Y6I4 520 aa9.65□□□□□ -0.86
SUPT16H-204ENST00000555943 C4AP0C0L4 1744 aa9.65□□□□□ -0.87
SUPT16H-204ENST00000555943 MYH14Q7Z406 1995 aaKnown RBP9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 A0A087WZG4 1122 aa9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 MMP10P09238 476 aa9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 IGFBP4P22692 258 aa9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 IL6STP40189 918 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 SMCPP49901 116 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 FKBP5Q13451 457 aaPredicted RBP9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 TBCELQ5QJ74 424 aa9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 MRPL14Q6P1L8 145 aaKnown RBP9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 INTS5Q6P9B9 1019 aaKnown RBP9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 KIF6Q6ZMV9 814 aa9.64□□□□□ -0.87
SUPT16H-204ENST00000555943 C1orf216Q8TAB5 229 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms