RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 SAMD7Q7Z3H4 446 aa14.97□□□□□ -0.01
SHMT2-221ENST00000555773 SEC62Q99442 399 aaKnown RBP14.97□□□□□ -0.01
SHMT2-221ENST00000555773 ESYT1Q9BSJ8 1104 aa14.97□□□□□ -0.01
SHMT2-221ENST00000555773 USP40Q9NVE5 1235 aa14.97□□□□□ -0.01
SHMT2-221ENST00000555773 CCDC88AQ3V6T2 1871 aa14.97□□□□□ -0.01
SHMT2-221ENST00000555773 SHTN1A0MZ66 631 aa14.96□□□□□ -0.01
SHMT2-221ENST00000555773 WNT10BO00744 389 aa14.96□□□□□ -0.01
SHMT2-221ENST00000555773 GPAA1O43292 621 aa14.96□□□□□ -0.01
SHMT2-221ENST00000555773 MBD4O95243 580 aa14.96□□□□□ -0.01
SHMT2-221ENST00000555773 RHBDL3P58872 404 aa14.96□□□□□ -0.01
SHMT2-221ENST00000555773 TBC1D10BQ4KMP7 808 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-221ENST00000555773 CDC42EP5Q6NZY7 148 aa14.96□□□□□ -0.01
SHMT2-221ENST00000555773 PNMA8AQ86V59 439 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-221ENST00000555773 CRNKL1Q9BZJ0 848 aaKnown RBP14.96□□□□□ -0.01
SHMT2-221ENST00000555773 POTECB2RU33 542 aa14.95□□□□□ -0.02
SHMT2-221ENST00000555773 PATL2C9JE40 543 aaKnown RBP14.95□□□□□ -0.02
SHMT2-221ENST00000555773 M0R2C6 588 aa14.95□□□□□ -0.02
SHMT2-221ENST00000555773 NPM3O75607 178 aaKnown RBP14.95□□□□□ -0.02
SHMT2-221ENST00000555773 EPHX2P34913 555 aa14.95□□□□□ -0.02
SHMT2-221ENST00000555773 DYNLL1P63167 89 aaKnown RBP14.95□□□□□ -0.02
SHMT2-221ENST00000555773 FKBP1CQ5VVH2 108 aa14.95□□□□□ -0.02
SHMT2-221ENST00000555773 KIAA1211Q6ZU35 1233 aa14.95□□□□□ -0.02
SHMT2-221ENST00000555773 LCORLQ8N3X6 602 aa14.95□□□□□ -0.02
SHMT2-221ENST00000555773 SH3RF3Q8TEJ3 882 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-221ENST00000555773 ZC3H15Q8WU90 426 aaKnown RBP14.95□□□□□ -0.02
SHMT2-221ENST00000555773 TAF1DQ9H5J8 278 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-221ENST00000555773 TDRD3Q9H7E2 651 aaKnown RBP14.95□□□□□ -0.02
SHMT2-221ENST00000555773 ARMT1Q9H993 441 aa14.95□□□□□ -0.02
SHMT2-221ENST00000555773 TMOD2Q9NZR1 351 aa14.95□□□□□ -0.02
SHMT2-221ENST00000555773 RPAP1Q9BWH6 1393 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-221ENST00000555773 CCDC171Q6TFL3 1326 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 PSME4Q14997 1843 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 NBPF9Q3BBW0 867 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 GIMAP6Q6P9H5 292 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 TEX11Q8IYF3 940 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 IDI2Q9BXS1 227 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 RRAGCQ9HB90 399 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 ATP8A2Q9NTI2 1148 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 ZNF70Q9UC06 446 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-221ENST00000555773 PCDHAC2Q9Y5I4 1007 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 SLC4A4Q9Y6R1 1079 aa14.94□□□□□ -0.02
SHMT2-221ENST00000555773 EPB41L2O43491 1005 aaKnown RBP14.93□□□□□ -0.02
SHMT2-221ENST00000555773 REC8O95072 547 aa14.93□□□□□ -0.02
SHMT2-221ENST00000555773 EGFRP00533 1210 aa14.93□□□□□ -0.02
SHMT2-221ENST00000555773 HIRAP54198 1017 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-221ENST00000555773 CCDC129Q6ZRS4 1044 aa14.93□□□□□ -0.02
SHMT2-221ENST00000555773 ZNF589Q86UQ0 364 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-221ENST00000555773 TRPM4Q8TD43 1214 aa14.93□□□□□ -0.02
SHMT2-221ENST00000555773 DDRGK1Q96HY6 314 aa14.93□□□□□ -0.02
SHMT2-221ENST00000555773 NACAP1Q9BZK3 213 aa14.93□□□□□ -0.02
SHMT2-221ENST00000555773 MYH13Q9UKX3 1938 aa14.93□□□□□ -0.02
SHMT2-221ENST00000555773 ENTPD3O75355 529 aa14.92□□□□□ -0.02
SHMT2-221ENST00000555773 WDHD1O75717 1129 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-221ENST00000555773 APPP05067 770 aa14.92□□□□□ -0.02
SHMT2-221ENST00000555773 HSPD1P10809 573 aaKnown RBP14.92□□□□□ -0.02
SHMT2-221ENST00000555773 USP5P45974 858 aa14.92□□□□□ -0.02
SHMT2-221ENST00000555773 TNFAIP1Q13829 316 aa14.92□□□□□ -0.02
SHMT2-221ENST00000555773 ALX1Q15699 326 aa14.92□□□□□ -0.02
SHMT2-221ENST00000555773 C8orf34Q49A92 452 aa14.92□□□□□ -0.02
SHMT2-221ENST00000555773 TGFBRAP1Q8WUH2 860 aa14.92□□□□□ -0.02
SHMT2-221ENST00000555773 DSCC1Q9BVC3 393 aa14.92□□□□□ -0.02
SHMT2-221ENST00000555773 IL25Q9H293 177 aa14.92□□□□□ -0.02
SHMT2-221ENST00000555773 PGAP2Q9UHJ9 254 aa14.92□□□□□ -0.02
SHMT2-221ENST00000555773 GSG1L2A8MUP6 293 aa14.91□□□□□ -0.02
SHMT2-221ENST00000555773 PRKAB2O43741 272 aa14.91□□□□□ -0.02
SHMT2-221ENST00000555773 TNNI2P48788 182 aa14.91□□□□□ -0.02
SHMT2-221ENST00000555773 FAM83AQ86UY5 434 aa14.91□□□□□ -0.02
SHMT2-221ENST00000555773 CTNNA3Q9UI47 895 aa14.91□□□□□ -0.02
SHMT2-221ENST00000555773 DOCK2Q92608 1830 aa14.91□□□□□ -0.02
SHMT2-221ENST00000555773 TIAM2Q8IVF5 1701 aa14.91□□□□□ -0.02
SHMT2-221ENST00000555773 PITPNM2Q9BZ72 1349 aa14.91□□□□□ -0.02
SHMT2-221ENST00000555773 ZNF646O15015 1829 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-221ENST00000555773 CLRN2A0PK11 232 aa14.9□□□□□ -0.02
SHMT2-221ENST00000555773 APOBEC3FQ8IUX4 373 aaKnown RBP14.9□□□□□ -0.02
SHMT2-221ENST00000555773 IFNL3Q8IZI9 196 aa14.9□□□□□ -0.02
SHMT2-221ENST00000555773 FAM151AQ8WW52 585 aa14.9□□□□□ -0.02
SHMT2-221ENST00000555773 MAP4K1Q92918 833 aa14.9□□□□□ -0.02
SHMT2-221ENST00000555773 DCPSQ96C86 337 aaKnown RBP14.9□□□□□ -0.02
SHMT2-221ENST00000555773 DCP1AQ9NPI6 582 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-221ENST00000555773 ANO2Q9NQ90 1003 aa14.9□□□□□ -0.02
SHMT2-221ENST00000555773 MKRN1Q9UHC7 482 aaKnown RBP14.9□□□□□ -0.02
SHMT2-221ENST00000555773 NFIAQ12857 509 aa14.89□□□□□ -0.03
SHMT2-221ENST00000555773 EAPPQ56P03 285 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-221ENST00000555773 VPS53Q5VIR6 699 aa14.89□□□□□ -0.03
SHMT2-221ENST00000555773 ANGEL2Q5VTE6 544 aaKnown RBP14.89□□□□□ -0.03
SHMT2-221ENST00000555773 MAPKAPK5Q8IW41 473 aa14.89□□□□□ -0.03
SHMT2-221ENST00000555773 ZNF526Q8TF50 670 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-221ENST00000555773 SDR42E1Q8WUS8 393 aa14.89□□□□□ -0.03
SHMT2-221ENST00000555773 LSG1Q9H089 658 aaKnown RBP14.89□□□□□ -0.03
SHMT2-221ENST00000555773 DHX36Q9H2U1 1008 aaKnown RBP14.89□□□□□ -0.03
SHMT2-221ENST00000555773 VEZTQ9HBM0 779 aa14.89□□□□□ -0.03
SHMT2-221ENST00000555773 GPBP1L1Q9HC44 474 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-221ENST00000555773 NMRK2Q9NPI5 230 aa14.89□□□□□ -0.03
SHMT2-221ENST00000555773 FAM198AQ9UFP1 575 aa14.89□□□□□ -0.03
SHMT2-221ENST00000555773 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-221ENST00000555773 TCP10L2B9ZVM9 353 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 FGAP02671 866 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 TDO2P48775 406 aa14.88□□□□□ -0.03
SHMT2-221ENST00000555773 CACNB3P54284 484 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms