RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 FOXP4Q8IVH2 680 aaPredicted RBP20.43■□□□□ 0.86
RCCD1-204ENST00000555737 CCDC12Q8WUD4 166 aaPredicted RBP20.43■□□□□ 0.86
RCCD1-204ENST00000555737 PPP2R2CQ9Y2T4 447 aa20.43■□□□□ 0.86
RCCD1-204ENST00000555737 A0A0U1RQJ8 604 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 hCG_1642624A0A1W2PR95 340 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 SNAP23O00161 211 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 H2AFXP16104 143 aaPredicted RBP20.42■□□□□ 0.86
RCCD1-204ENST00000555737 ATRIPQ8WXE1 791 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 ANKARQ7Z5J8 1434 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 JCADQ9P266 1359 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 CMA1P23946 247 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 CYB5R4Q7L1T6 521 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 STAMQ92783 540 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 PSDA5PKW4 1024 aaPredicted RBP20.42■□□□□ 0.86
RCCD1-204ENST00000555737 IRX5P78411 483 aaPredicted RBP20.42■□□□□ 0.86
RCCD1-204ENST00000555737 MCM6Q14566 821 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 KLHL34Q8N239 644 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 BAG1Q99933 345 aaPredicted RBP20.42■□□□□ 0.86
RCCD1-204ENST00000555737 L2HGDHQ9H9P8 463 aa20.42■□□□□ 0.86
RCCD1-204ENST00000555737 AFMP43652 599 aa20.41■□□□□ 0.86
RCCD1-204ENST00000555737 NUP133Q8WUM0 1156 aa20.41■□□□□ 0.86
RCCD1-204ENST00000555737 KCNH3Q9ULD8 1083 aa20.41■□□□□ 0.86
RCCD1-204ENST00000555737 NFE2L3Q9Y4A8 694 aa20.41■□□□□ 0.86
RCCD1-204ENST00000555737 NEDD4P46934 1319 aa20.41■□□□□ 0.86
RCCD1-204ENST00000555737 POLR2DO15514 142 aaKnown RBP20.41■□□□□ 0.86
RCCD1-204ENST00000555737 OAS2P29728 719 aaKnown RBP20.41■□□□□ 0.86
RCCD1-204ENST00000555737 CCDC102BQ68D86 513 aa20.41■□□□□ 0.86
RCCD1-204ENST00000555737 ATL3Q6DD88 541 aa20.41■□□□□ 0.86
RCCD1-204ENST00000555737 HSD3B7Q9H2F3 369 aa20.41■□□□□ 0.86
RCCD1-204ENST00000555737 HEG1Q9ULI3 1381 aa20.41■□□□□ 0.86
RCCD1-204ENST00000555737 BTBD18B2RXH4 712 aa20.4■□□□□ 0.86
RCCD1-204ENST00000555737 FOXP2O15409 715 aa20.4■□□□□ 0.86
RCCD1-204ENST00000555737 SLC39A14Q15043 492 aa20.4■□□□□ 0.86
RCCD1-204ENST00000555737 METTL24Q5JXM2 366 aa20.4■□□□□ 0.86
RCCD1-204ENST00000555737 TRIM65Q6PJ69 517 aa20.4■□□□□ 0.86
RCCD1-204ENST00000555737 METTL16Q86W50 562 aaKnown RBP20.4■□□□□ 0.86
RCCD1-204ENST00000555737 GOLGA8AA7E2F4 631 aa20.4■□□□□ 0.86
RCCD1-204ENST00000555737 PRR29P0C7W0 189 aa20.4■□□□□ 0.86
RCCD1-204ENST00000555737 IARSP41252 1262 aaKnown RBP20.4■□□□□ 0.86
RCCD1-204ENST00000555737 CTDSPL2Q05D32 466 aa20.4■□□□□ 0.86
RCCD1-204ENST00000555737 BRAPQ7Z569 592 aa20.4■□□□□ 0.86
RCCD1-204ENST00000555737 TBC1D10CQ8IV04 446 aa20.4■□□□□ 0.86
RCCD1-204ENST00000555737 SAMSN1Q9NSI8 373 aaKnown RBP20.4■□□□□ 0.86
RCCD1-204ENST00000555737 PHACTR2O75167 634 aa20.39■□□□□ 0.85
RCCD1-204ENST00000555737 SASH3O75995 380 aa20.39■□□□□ 0.85
RCCD1-204ENST00000555737 PPP2R3AQ06190 1150 aa20.39■□□□□ 0.85
RCCD1-204ENST00000555737 WWC2Q6AWC2 1192 aa20.39■□□□□ 0.85
RCCD1-204ENST00000555737 REXO1L1PQ8IX06 675 aa20.39■□□□□ 0.85
RCCD1-204ENST00000555737 DHX58Q96C10 678 aa20.39■□□□□ 0.85
RCCD1-204ENST00000555737 AGXT2Q9BYV1 514 aa20.39■□□□□ 0.85
RCCD1-204ENST00000555737 CBFA2T2O43439 604 aa20.39■□□□□ 0.85
RCCD1-204ENST00000555737 CCDC93Q567U6 631 aa20.39■□□□□ 0.85
RCCD1-204ENST00000555737 ANKLE2Q86XL3 938 aa20.39■□□□□ 0.85
RCCD1-204ENST00000555737 MB21D2Q8IYB1 491 aaPredicted RBP20.39■□□□□ 0.85
RCCD1-204ENST00000555737 SMYD4Q8IYR2 804 aaPredicted RBP20.39■□□□□ 0.85
RCCD1-204ENST00000555737 VWA3AA6NCI4 1184 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 CASP7P55210 303 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 TMEM67Q5HYA8 995 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 CPLX2Q6PUV4 134 aaKnown RBP20.38■□□□□ 0.85
RCCD1-204ENST00000555737 SMARCE1Q969G3 411 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 CRYBG1Q9Y4K1 1723 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 GUCY1A2P33402 732 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 LMAN1P49257 510 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 FMR1Q06787 632 aaKnown RBP eCLIP20.38■□□□□ 0.85
RCCD1-204ENST00000555737 USP49Q70CQ1 688 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 LRP10Q7Z4F1 713 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 PLCD3Q8N3E9 789 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 SERTAD1Q9UHV2 236 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 KRBA2Q6ZNG9 492 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 CNNM1Q9NRU3 951 aa20.38■□□□□ 0.85
RCCD1-204ENST00000555737 LTN1O94822 1766 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 SOWAHDA6NJG2 315 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 ZSCAN12O43309 604 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 BMP6P22004 513 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 PROSER2Q86WR7 435 aaPredicted RBP20.37■□□□□ 0.85
RCCD1-204ENST00000555737 VSTM4Q8IW00 320 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 JMYQ8N9B5 988 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 TMEM51Q9NW97 253 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 KDM6AO15550 1401 aaPredicted RBP20.37■□□□□ 0.85
RCCD1-204ENST00000555737 H7C1W4 665 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 IFIT3O14879 490 aaKnown RBP20.37■□□□□ 0.85
RCCD1-204ENST00000555737 ZBTB43O43298 467 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 TADA3O75528 432 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 NR5A1Q13285 461 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 INTS13Q9NVM9 706 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 ANGEL1Q9UNK9 670 aaKnown RBP20.37■□□□□ 0.85
RCCD1-204ENST00000555737 NCAPD2Q15021 1401 aa20.37■□□□□ 0.85
RCCD1-204ENST00000555737 RHOXF2BP0C7M4 288 aa20.36■□□□□ 0.85
RCCD1-204ENST00000555737 LDHAL6AQ6ZMR3 332 aa20.36■□□□□ 0.85
RCCD1-204ENST00000555737 RHOXF2Q9BQY4 288 aa20.36■□□□□ 0.85
RCCD1-204ENST00000555737 PES1O00541 588 aaKnown RBP20.36■□□□□ 0.85
RCCD1-204ENST00000555737 SMC1AQ14683 1233 aaKnown RBP20.36■□□□□ 0.85
RCCD1-204ENST00000555737 LRRFIP1Q32MZ4 808 aaKnown RBP20.36■□□□□ 0.85
RCCD1-204ENST00000555737 PARD6BQ9BYG5 372 aa20.36■□□□□ 0.85
RCCD1-204ENST00000555737 GTF2E1P29083 439 aaPredicted RBP20.36■□□□□ 0.85
RCCD1-204ENST00000555737 TAF3Q5VWG9 929 aa20.36■□□□□ 0.85
RCCD1-204ENST00000555737 SUGCTQ9HAC7 445 aa20.36■□□□□ 0.85
RCCD1-204ENST00000555737 CALCOCO1Q9P1Z2 691 aa20.36■□□□□ 0.85
RCCD1-204ENST00000555737 APPBP2Q92624 585 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms