RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 HOOK2Q96ED9 719 aa12.29□□□□□ -0.44
SCFD1-215ENST00000555259 GDF15Q99988 308 aa12.29□□□□□ -0.44
SCFD1-215ENST00000555259 GABRQQ9UN88 632 aa12.29□□□□□ -0.44
SCFD1-215ENST00000555259 KCNH4Q9UQ05 1017 aa12.29□□□□□ -0.44
SCFD1-215ENST00000555259 TFRCP02786 760 aaKnown RBP12.28□□□□□ -0.44
SCFD1-215ENST00000555259 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
SCFD1-215ENST00000555259 BCRP11274 1271 aa12.28□□□□□ -0.44
SCFD1-215ENST00000555259 INPP5BP32019 993 aa12.28□□□□□ -0.44
SCFD1-215ENST00000555259 HDLBPQ00341 1268 aaKnown RBP12.28□□□□□ -0.44
SCFD1-215ENST00000555259 MOGSQ13724 837 aa12.28□□□□□ -0.44
SCFD1-215ENST00000555259 DCAF15Q66K64 600 aa12.28□□□□□ -0.44
SCFD1-215ENST00000555259 ZNF594Q96JF6 807 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-215ENST00000555259 FAM84BQ96KN1 310 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-215ENST00000555259 DEFB118Q96PH6 123 aa12.28□□□□□ -0.44
SCFD1-215ENST00000555259 COL25A1Q9BXS0 654 aaPredicted RBP12.28□□□□□ -0.44
SCFD1-215ENST00000555259 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
SCFD1-215ENST00000555259 ADCY3O60266 1144 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 INHAP05111 366 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 ELNP15502 786 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 CAPN2P17655 700 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 FLIIQ13045 1269 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 UBE4AQ14139 1066 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 FKBP1CQ5VVH2 108 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 MIGA2Q7L4E1 593 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 DNAAF4Q8WXU2 420 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 TEKT1Q969V4 418 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 PAWRQ96IZ0 340 aaKnown RBP12.27□□□□□ -0.44
SCFD1-215ENST00000555259 PARK7Q99497 189 aaKnown RBP12.27□□□□□ -0.44
SCFD1-215ENST00000555259 ZNF341Q9BYN7 854 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 MTMR10Q9NXD2 777 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.44
SCFD1-215ENST00000555259 RPAP1Q9BWH6 1393 aaPredicted RBP12.27□□□□□ -0.45
SCFD1-215ENST00000555259 CYP2C8P10632 490 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 FLT3LGP49771 235 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 CCDC57Q2TAC2 916 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 LRIT3Q3SXY7 679 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 TAF7LQ5H9L4 462 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 LMBR1LQ6UX01 489 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 ZDHHC15Q96MV8 337 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 CRISPLD2Q9H0B8 497 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 PAK6Q9NQU5 681 aaPredicted RBP12.26□□□□□ -0.45
SCFD1-215ENST00000555259 ALPK3Q96L96 1907 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 MGAMO43451 1857 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 FKBP5Q13451 457 aaPredicted RBP12.26□□□□□ -0.45
SCFD1-215ENST00000555259 APOBEC3HQ6NTF7 200 aaKnown RBP12.26□□□□□ -0.45
SCFD1-215ENST00000555259 PXYLP1Q8TE99 480 aa12.26□□□□□ -0.45
SCFD1-215ENST00000555259 TSR2Q969E8 191 aaKnown RBP12.26□□□□□ -0.45
SCFD1-215ENST00000555259 BCAMP50895 628 aa12.25□□□□□ -0.45
SCFD1-215ENST00000555259 CHAF1AQ13111 956 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-215ENST00000555259 TWISTNBQ3B726 338 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-215ENST00000555259 EPHA10Q5JZY3 1008 aa12.25□□□□□ -0.45
SCFD1-215ENST00000555259 GPAT2Q6NUI2 795 aa12.25□□□□□ -0.45
SCFD1-215ENST00000555259 NECAB2Q7Z6G3 386 aa12.25□□□□□ -0.45
SCFD1-215ENST00000555259 C7orf61Q8IZ16 206 aa12.25□□□□□ -0.45
SCFD1-215ENST00000555259 DIS3LQ8TF46 1054 aaKnown RBP12.25□□□□□ -0.45
SCFD1-215ENST00000555259 TBC1D22AQ8WUA7 517 aa12.25□□□□□ -0.45
SCFD1-215ENST00000555259 ZNF112Q9UJU3 913 aa12.25□□□□□ -0.45
SCFD1-215ENST00000555259 ZMYND8Q9ULU4 1186 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-215ENST00000555259 IQSEC3Q9UPP2 1182 aaPredicted RBP12.25□□□□□ -0.45
SCFD1-215ENST00000555259 IRF5Q13568 498 aa12.24□□□□□ -0.45
SCFD1-215ENST00000555259 MRIQ9BWK5 157 aa12.24□□□□□ -0.45
SCFD1-215ENST00000555259 MUC3AQ02505 3323 aa12.24□□□□□ -0.45
SCFD1-215ENST00000555259 PRUNE2Q8WUY3 3088 aa12.24□□□□□ -0.45
SCFD1-215ENST00000555259 NOL9Q5SY16 702 aaKnown RBP12.23□□□□□ -0.45
SCFD1-215ENST00000555259 FBXO33Q7Z6M2 555 aa12.23□□□□□ -0.45
SCFD1-215ENST00000555259 VPS37DQ86XT2 251 aa12.23□□□□□ -0.45
SCFD1-215ENST00000555259 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.23□□□□□ -0.45
SCFD1-215ENST00000555259 TDHQ8IZJ6 230 aa12.23□□□□□ -0.45
SCFD1-215ENST00000555259 CDH23Q9H251 3354 aa12.23□□□□□ -0.45
SCFD1-215ENST00000555259 CXCL11O14625 94 aa12.22□□□□□ -0.45
SCFD1-215ENST00000555259 TNPO2O14787 897 aaKnown RBP12.22□□□□□ -0.45
SCFD1-215ENST00000555259 FAM151AQ8WW52 585 aa12.22□□□□□ -0.45
SCFD1-215ENST00000555259 FRAT2O75474 233 aaPredicted RBP12.22□□□□□ -0.45
SCFD1-215ENST00000555259 SYN1P17600 705 aa12.22□□□□□ -0.45
SCFD1-215ENST00000555259 MAGEA10P43363 369 aaPredicted RBP12.22□□□□□ -0.45
SCFD1-215ENST00000555259 BEND3Q5T5X7 828 aa12.22□□□□□ -0.45
SCFD1-215ENST00000555259 HHIPL2Q6UWX4 724 aa12.22□□□□□ -0.45
SCFD1-215ENST00000555259 ANKLE1Q8NAG6 615 aa12.22□□□□□ -0.45
SCFD1-215ENST00000555259 PUS3Q9BZE2 481 aaKnown RBP12.22□□□□□ -0.45
SCFD1-215ENST00000555259 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.22□□□□□ -0.45
SCFD1-215ENST00000555259 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
SCFD1-215ENST00000555259 MAST3O60307 1309 aa12.21□□□□□ -0.45
SCFD1-215ENST00000555259 GRM8O00222 908 aa12.21□□□□□ -0.46
SCFD1-215ENST00000555259 SUGT1Q9Y2Z0 365 aa12.21□□□□□ -0.46
SCFD1-215ENST00000555259 A0A0G2JLL6 359 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-215ENST00000555259 F6X3S4 739 aa12.2□□□□□ -0.46
SCFD1-215ENST00000555259 TCP10Q12799 353 aa12.2□□□□□ -0.46
SCFD1-215ENST00000555259 CAVIN4Q5BKX8 364 aa12.2□□□□□ -0.46
SCFD1-215ENST00000555259 FASTKD5Q7L8L6 764 aaKnown RBP12.2□□□□□ -0.46
SCFD1-215ENST00000555259 PRRT2Q7Z6L0 340 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-215ENST00000555259 UBE2OQ9C0C9 1292 aaKnown RBP12.2□□□□□ -0.46
SCFD1-215ENST00000555259 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
SCFD1-215ENST00000555259 SLC45A1Q9Y2W3 748 aa12.2□□□□□ -0.46
SCFD1-215ENST00000555259 MROH5Q6ZUA9 1318 aa12.2□□□□□ -0.46
SCFD1-215ENST00000555259 NFIAQ12857 509 aa12.19□□□□□ -0.46
SCFD1-215ENST00000555259 POTEHQ6S545 545 aa12.19□□□□□ -0.46
SCFD1-215ENST00000555259 SMCR8Q8TEV9 937 aaPredicted RBP12.19□□□□□ -0.46
SCFD1-215ENST00000555259 COA7Q96BR5 231 aa12.19□□□□□ -0.46
SCFD1-215ENST00000555259 ZHX2Q9Y6X8 837 aa12.19□□□□□ -0.46
SCFD1-215ENST00000555259 DOCK3Q8IZD9 2030 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms