RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 EAF2Q96CJ1 260 aaPredicted RBP10.35□□□□□ -0.75
TRIM9-204ENST00000555170 ZNF333Q96JL9 665 aa10.35□□□□□ -0.75
TRIM9-204ENST00000555170 GPR108Q9NPR9 543 aa10.35□□□□□ -0.75
TRIM9-204ENST00000555170 DBNLQ9UJU6 430 aaKnown RBP10.35□□□□□ -0.75
TRIM9-204ENST00000555170 TTF2Q9UNY4 1162 aaKnown RBP10.35□□□□□ -0.75
TRIM9-204ENST00000555170 PCDHB15Q9Y5E8 787 aa10.35□□□□□ -0.75
TRIM9-204ENST00000555170 OTOFQ9HC10 1997 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 SPDYE2BA6NHP3 402 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 APBB1O00213 710 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 SEMA3EO15041 775 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 ZBTB22O15209 634 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 HMMRO75330 724 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 MYCP01106 439 aaPredicted RBP10.34□□□□□ -0.75
TRIM9-204ENST00000555170 SPDYE6P0CI01 402 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 ARID4AP29374 1257 aaPredicted RBP10.34□□□□□ -0.75
TRIM9-204ENST00000555170 PRDX5P30044 214 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 PRKG1Q13976 671 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 SPRYD7Q5W111 196 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 IFNL1Q8IU54 200 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 MTMR14Q8NCE2 650 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 RHPN1Q8TCX5 695 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 TBC1D22AQ8WUA7 517 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 ERO1AQ96HE7 468 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 CCDC8Q9H0W5 538 aaPredicted RBP10.34□□□□□ -0.75
TRIM9-204ENST00000555170 EFCC1Q9HA90 598 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 IL1RAPL2Q9NP60 686 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 SUPT16HQ9Y5B9 1047 aaKnown RBP10.34□□□□□ -0.75
TRIM9-204ENST00000555170 CDK5RAP2Q96SN8 1893 aa10.34□□□□□ -0.75
TRIM9-204ENST00000555170 PDS5AQ29RF7 1337 aaKnown RBP10.33□□□□□ -0.76
TRIM9-204ENST00000555170 PITPNM2Q9BZ72 1349 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 SALL1Q9NSC2 1324 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 CLRN2A0PK11 232 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 IGF2BP3O00425 579 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRIM9-204ENST00000555170 MCAMP43121 646 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 CRKP46108 304 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 DLGAP5Q15398 846 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 SLC4A8Q2Y0W8 1093 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 ERC1Q8IUD2 1116 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 WDR66Q8TBY9 1149 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 DPF3Q92784 378 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 PRMT6Q96LA8 375 aaPredicted RBP10.33□□□□□ -0.76
TRIM9-204ENST00000555170 PRO3102Q9H379 93 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 GNL3LQ9NVN8 582 aaKnown RBP10.33□□□□□ -0.76
TRIM9-204ENST00000555170 HMG20BQ9P0W2 317 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
TRIM9-204ENST00000555170 DENND2AQ9ULE3 1009 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 SSC5DA1L4H1 1573 aa10.33□□□□□ -0.76
TRIM9-204ENST00000555170 SOX1O00570 391 aaPredicted RBP10.32□□□□□ -0.76
TRIM9-204ENST00000555170 MMP14P50281 582 aa10.32□□□□□ -0.76
TRIM9-204ENST00000555170 INHBEP58166 350 aa10.32□□□□□ -0.76
TRIM9-204ENST00000555170 DIXDC1Q155Q3 683 aa10.32□□□□□ -0.76
TRIM9-204ENST00000555170 GORABQ5T7V8 394 aa10.32□□□□□ -0.76
TRIM9-204ENST00000555170 AACSQ86V21 672 aa10.32□□□□□ -0.76
TRIM9-204ENST00000555170 SPATA5Q8NB90 893 aa10.32□□□□□ -0.76
TRIM9-204ENST00000555170 SERPINA10Q9UK55 444 aa10.32□□□□□ -0.76
TRIM9-204ENST00000555170 FZD1Q9UP38 647 aa10.32□□□□□ -0.76
TRIM9-204ENST00000555170 LAMA3Q16787 3333 aa10.32□□□□□ -0.76
TRIM9-204ENST00000555170 FOCADQ5VW36 1801 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 MANSC4A6NHS7 340 aaPredicted RBP10.31□□□□□ -0.76
TRIM9-204ENST00000555170 SMARCA5O60264 1052 aaPredicted RBP10.31□□□□□ -0.76
TRIM9-204ENST00000555170 RBM5P52756 815 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRIM9-204ENST00000555170 CRHR2Q13324 411 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 HSP90AB4PQ58FF6 505 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 TTC39AQ5SRH9 613 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 LDLRAD1Q5T700 205 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 ZNF384Q8TF68 577 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 KIF1BPQ96EK5 621 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 LRCH3Q96II8 777 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 COL25A1Q9BXS0 654 aaPredicted RBP10.31□□□□□ -0.76
TRIM9-204ENST00000555170 TDRD3Q9H7E2 651 aaKnown RBP10.31□□□□□ -0.76
TRIM9-204ENST00000555170 SNRKQ9NRH2 765 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 SUGT1Q9Y2Z0 365 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 MYH7P12883 1935 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 MAST3O60307 1309 aa10.31□□□□□ -0.76
TRIM9-204ENST00000555170 UNC80Q8N2C7 3258 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 RAB11FIP3O75154 756 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 LDHBP07195 334 aaKnown RBP10.3□□□□□ -0.76
TRIM9-204ENST00000555170 UQCRFS1P1P0C7P4 283 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 NF2P35240 595 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 CACNB3P54284 484 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 IRX6P78412 446 aaPredicted RBP10.3□□□□□ -0.76
TRIM9-204ENST00000555170 SP3Q02447 781 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 SLC9C1Q4G0N8 1177 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 TBC1D9Q6ZT07 1266 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 ARMC9Q7Z3E5 817 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 NBPF11Q86T75 865 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 APOBEC3FQ8IUX4 373 aaKnown RBP10.3□□□□□ -0.76
TRIM9-204ENST00000555170 CDAN1Q8IWY9 1227 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 TEKT1Q969V4 418 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 SLC10A4Q96EP9 437 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 ZDHHC15Q96MV8 337 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 BCL11AQ9H165 835 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 VEZTQ9HBM0 779 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 ZNF70Q9UC06 446 aaPredicted RBP10.3□□□□□ -0.76
TRIM9-204ENST00000555170 ABCF2Q9UG63 623 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 DAGLAQ9Y4D2 1042 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 PTCH2Q9Y6C5 1203 aa10.3□□□□□ -0.76
TRIM9-204ENST00000555170 NDUFB9Q9Y6M9 179 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms