RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 MAOBP27338 520 aa9.86□□□□□ -0.83
VRK1-203ENST00000555067 ZNF423Q2M1K9 1284 aa9.86□□□□□ -0.83
VRK1-203ENST00000555067 OGFOD3Q6PK18 319 aa9.86□□□□□ -0.83
VRK1-203ENST00000555067 TXNDC2Q86VQ3 553 aa9.86□□□□□ -0.83
VRK1-203ENST00000555067 CCNJLQ8IV13 435 aa9.86□□□□□ -0.83
VRK1-203ENST00000555067 A0A1W2PP55 124 aa9.85□□□□□ -0.83
VRK1-203ENST00000555067 PCDH1Q08174 1060 aa9.85□□□□□ -0.83
VRK1-203ENST00000555067 POU4F3Q15319 338 aa9.85□□□□□ -0.83
VRK1-203ENST00000555067 DYMQ7RTS9 669 aa9.85□□□□□ -0.83
VRK1-203ENST00000555067 ATG4DQ86TL0 474 aaPredicted RBP9.85□□□□□ -0.83
VRK1-203ENST00000555067 RETREG2Q8NC44 543 aa9.85□□□□□ -0.83
VRK1-203ENST00000555067 GLIS3Q8NEA6 775 aa9.85□□□□□ -0.83
VRK1-203ENST00000555067 FAM129BQ96TA1 746 aa9.85□□□□□ -0.83
VRK1-203ENST00000555067 CLEC4MQ9H2X3 399 aaPredicted RBP9.85□□□□□ -0.83
VRK1-203ENST00000555067 LIN7BQ9HAP6 207 aa9.85□□□□□ -0.83
VRK1-203ENST00000555067 A0A096LPE4 126 aa9.84□□□□□ -0.83
VRK1-203ENST00000555067 A0A1W2PPZ6 126 aa9.84□□□□□ -0.83
VRK1-203ENST00000555067 DYNC1LI2O43237 492 aaPredicted RBP9.84□□□□□ -0.83
VRK1-203ENST00000555067 CYP11A1P05108 521 aa9.84□□□□□ -0.83
VRK1-203ENST00000555067 HP1BP3Q5SSJ5 553 aaPredicted RBP9.84□□□□□ -0.83
VRK1-203ENST00000555067 MISP3Q96FF7 219 aa9.84□□□□□ -0.83
VRK1-203ENST00000555067 KRTAP4-11Q9BYQ6 195 aa9.84□□□□□ -0.83
VRK1-203ENST00000555067 FARP2O94887 1054 aaPredicted RBP9.83□□□□□ -0.84
VRK1-203ENST00000555067 AKAP4Q5JQC9 854 aa9.83□□□□□ -0.84
VRK1-203ENST00000555067 KIAA0319Q5VV43 1072 aa9.83□□□□□ -0.84
VRK1-203ENST00000555067 TCF12Q99081 682 aa9.83□□□□□ -0.84
VRK1-203ENST00000555067 CPNE3O75131 537 aaKnown RBP9.82□□□□□ -0.84
VRK1-203ENST00000555067 FUT4P22083 530 aa9.82□□□□□ -0.84
VRK1-203ENST00000555067 ASPAP45381 313 aa9.82□□□□□ -0.84
VRK1-203ENST00000555067 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
VRK1-203ENST00000555067 TRIM56Q9BRZ2 755 aaKnown RBP9.82□□□□□ -0.84
VRK1-203ENST00000555067 GRIA4P48058 902 aa9.81□□□□□ -0.84
VRK1-203ENST00000555067 BNIP3Q12983 259 aa9.81□□□□□ -0.84
VRK1-203ENST00000555067 FAM168AQ92567 244 aa9.81□□□□□ -0.84
VRK1-203ENST00000555067 ZFYVE1Q9HBF4 777 aa9.81□□□□□ -0.84
VRK1-203ENST00000555067 SYNGAP1Q96PV0 1343 aa9.81□□□□□ -0.84
VRK1-203ENST00000555067 ORC1Q13415 861 aa9.8□□□□□ -0.84
VRK1-203ENST00000555067 USPL1Q5W0Q7 1092 aa9.8□□□□□ -0.84
VRK1-203ENST00000555067 TMEM40Q8WWA1 233 aa9.8□□□□□ -0.84
VRK1-203ENST00000555067 DNAJC25Q9H1X3 360 aa9.8□□□□□ -0.84
VRK1-203ENST00000555067 AP4E1Q9UPM8 1137 aa9.8□□□□□ -0.84
VRK1-203ENST00000555067 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
VRK1-203ENST00000555067 ECEL1O95672 775 aa9.79□□□□□ -0.84
VRK1-203ENST00000555067 RNASE1P07998 156 aaKnown RBP9.79□□□□□ -0.84
VRK1-203ENST00000555067 CD8BP10966 210 aa9.79□□□□□ -0.84
VRK1-203ENST00000555067 CYP27C1Q4G0S4 372 aa9.79□□□□□ -0.84
VRK1-203ENST00000555067 DDX54Q8TDD1 881 aaKnown RBP9.79□□□□□ -0.84
VRK1-203ENST00000555067 EHD4Q9H223 541 aa9.79□□□□□ -0.84
VRK1-203ENST00000555067 NPHS2Q9NP85 383 aa9.79□□□□□ -0.84
VRK1-203ENST00000555067 RAD18Q9NS91 495 aa9.79□□□□□ -0.84
VRK1-203ENST00000555067 DAGLAQ9Y4D2 1042 aa9.79□□□□□ -0.84
VRK1-203ENST00000555067 KRTAP9-7A8MTY7 169 aa9.78□□□□□ -0.84
VRK1-203ENST00000555067 SPRED3Q2MJR0 410 aa9.78□□□□□ -0.84
VRK1-203ENST00000555067 DMRTB1Q96MA1 342 aa9.78□□□□□ -0.84
VRK1-203ENST00000555067 RC3H2Q9HBD1 1191 aaKnown RBP9.78□□□□□ -0.84
VRK1-203ENST00000555067 MBNL3Q9NUK0 354 aaKnown RBP9.78□□□□□ -0.84
VRK1-203ENST00000555067 ADAMTS6Q9UKP5 1117 aa9.78□□□□□ -0.84
VRK1-203ENST00000555067 GPR182O15218 404 aa9.77□□□□□ -0.85
VRK1-203ENST00000555067 AOC2O75106 756 aa9.77□□□□□ -0.85
VRK1-203ENST00000555067 ITPKAP23677 461 aa9.77□□□□□ -0.85
VRK1-203ENST00000555067 PTPN12Q05209 780 aaKnown RBP9.77□□□□□ -0.85
VRK1-203ENST00000555067 PLD6Q8N2A8 252 aaKnown RBP9.77□□□□□ -0.85
VRK1-203ENST00000555067 NETO1Q8TDF5 533 aa9.77□□□□□ -0.85
VRK1-203ENST00000555067 TMC1Q8TDI8 760 aa9.77□□□□□ -0.85
VRK1-203ENST00000555067 WDR18Q9BV38 432 aa9.77□□□□□ -0.85
VRK1-203ENST00000555067 ZNF576Q9H609 170 aa9.77□□□□□ -0.85
VRK1-203ENST00000555067 B3GALT4O96024 378 aa9.76□□□□□ -0.85
VRK1-203ENST00000555067 IGHA2P01877 340 aa9.76□□□□□ -0.85
VRK1-203ENST00000555067 ALKBH8Q96BT7 664 aaKnown RBP9.76□□□□□ -0.85
VRK1-203ENST00000555067 CORO1BQ9BR76 489 aa9.76□□□□□ -0.85
VRK1-203ENST00000555067 RBCK1Q9BYM8 510 aa9.76□□□□□ -0.85
VRK1-203ENST00000555067 VAV3Q9UKW4 847 aa9.76□□□□□ -0.85
VRK1-203ENST00000555067 PPP1R9AQ9ULJ8 1098 aa9.76□□□□□ -0.85
VRK1-203ENST00000555067 EIF1AYO14602 144 aaKnown RBP9.75□□□□□ -0.85
VRK1-203ENST00000555067 KRTAP19-4Q3LI73 84 aa9.75□□□□□ -0.85
VRK1-203ENST00000555067 PRPF40BQ6NWY9 871 aaKnown RBP9.75□□□□□ -0.85
VRK1-203ENST00000555067 CCDC74AQ96AQ1 378 aa9.75□□□□□ -0.85
VRK1-203ENST00000555067 PRKCQQ04759 706 aa9.74□□□□□ -0.85
VRK1-203ENST00000555067 MESP2Q0VG99 397 aa9.74□□□□□ -0.85
VRK1-203ENST00000555067 PKN1Q16512 942 aa9.74□□□□□ -0.85
VRK1-203ENST00000555067 NIF3L1Q9GZT8 377 aa9.74□□□□□ -0.85
VRK1-203ENST00000555067 TRAK1Q9UPV9 953 aa9.74□□□□□ -0.85
VRK1-203ENST00000555067 SOWAHDA6NJG2 315 aa9.73□□□□□ -0.85
VRK1-203ENST00000555067 CILP2Q8IUL8 1156 aa9.73□□□□□ -0.85
VRK1-203ENST00000555067 KSR1Q8IVT5 923 aa9.73□□□□□ -0.85
VRK1-203ENST00000555067 LRRN4CLQ8ND94 238 aa9.73□□□□□ -0.85
VRK1-203ENST00000555067 LGR6Q9HBX8 967 aa9.73□□□□□ -0.85
VRK1-203ENST00000555067 ABCB6Q9NP58 842 aa9.73□□□□□ -0.85
VRK1-203ENST00000555067 U3KQE9 123 aa9.73□□□□□ -0.85
VRK1-203ENST00000555067 TMPRSS2O15393 492 aa9.72□□□□□ -0.85
VRK1-203ENST00000555067 RPS26P11Q5JNZ5 115 aaPredicted RBP9.72□□□□□ -0.85
VRK1-203ENST00000555067 HOMEZQ8IX15 550 aa9.72□□□□□ -0.85
VRK1-203ENST00000555067 BHLHE22Q8NFJ8 381 aaPredicted RBP9.72□□□□□ -0.85
VRK1-203ENST00000555067 GNEQ9Y223 722 aaKnown RBP9.72□□□□□ -0.85
VRK1-203ENST00000555067 GADD45BO75293 160 aaPredicted RBP9.71□□□□□ -0.86
VRK1-203ENST00000555067 FAM87AP0C7U9 286 aa9.71□□□□□ -0.86
VRK1-203ENST00000555067 CDK5R2Q13319 367 aa9.71□□□□□ -0.86
VRK1-203ENST00000555067 AP3B2Q13367 1082 aa9.71□□□□□ -0.86
VRK1-203ENST00000555067 FAM181AQ8N9Y4 354 aa9.71□□□□□ -0.86
VRK1-203ENST00000555067 CSRNP1Q96S65 589 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms