RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 GIPRP48546 466 aa7.97□□□□□ -1.13
PSEN1-211ENST00000554995 ZNF165P49910 485 aa7.97□□□□□ -1.13
PSEN1-211ENST00000554995 TCEAL1Q15170 157 aa7.97□□□□□ -1.13
PSEN1-211ENST00000554995 TNNI3KQ59H18 835 aa7.97□□□□□ -1.13
PSEN1-211ENST00000554995 FBXW10Q5XX13 1052 aa7.97□□□□□ -1.13
PSEN1-211ENST00000554995 REC114Q7Z4M0 266 aa7.97□□□□□ -1.13
PSEN1-211ENST00000554995 NANOS1Q8WY41 292 aaKnown RBP7.97□□□□□ -1.13
PSEN1-211ENST00000554995 EMILIN2Q9BXX0 1053 aa7.97□□□□□ -1.13
PSEN1-211ENST00000554995 SNTG2Q9NY99 539 aa7.97□□□□□ -1.13
PSEN1-211ENST00000554995 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.97□□□□□ -1.13
PSEN1-211ENST00000554995 ADARB2-AS1A8MUL3 147 aa7.96□□□□□ -1.14
PSEN1-211ENST00000554995 BPNT1O95861 308 aa7.96□□□□□ -1.14
PSEN1-211ENST00000554995 ZNF252P-AS1Q0IIN9 211 aa7.96□□□□□ -1.14
PSEN1-211ENST00000554995 IKBKEQ14164 716 aa7.96□□□□□ -1.14
PSEN1-211ENST00000554995 RASA3Q14644 834 aa7.96□□□□□ -1.14
PSEN1-211ENST00000554995 KANK3Q6NY19 840 aa7.96□□□□□ -1.14
PSEN1-211ENST00000554995 GK5Q6ZS86 529 aa7.96□□□□□ -1.14
PSEN1-211ENST00000554995 REXO1Q8N1G1 1221 aaKnown RBP7.96□□□□□ -1.14
PSEN1-211ENST00000554995 DEPDC7Q96QD5 511 aa7.96□□□□□ -1.14
PSEN1-211ENST00000554995 FRRS1LQ9P0K9 344 aa7.96□□□□□ -1.14
PSEN1-211ENST00000554995 FAM221BA6H8Z2 402 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 FAM177BA6PVY3 158 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 ARAFP10398 606 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 MX2P20592 715 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 EPHA1P21709 976 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 ADH6P28332 368 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 CDC27P30260 824 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 CLCQ05315 142 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 PTPN11Q06124 597 aaPredicted RBP7.95□□□□□ -1.14
PSEN1-211ENST00000554995 DIEXFQ68CQ4 756 aaKnown RBP7.95□□□□□ -1.14
PSEN1-211ENST00000554995 CELF2-AS1Q8N7Q2 184 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 CRBNQ96SW2 442 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 MDFIQ99750 246 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 ZNRF3Q9ULT6 936 aa7.95□□□□□ -1.14
PSEN1-211ENST00000554995 CCDC85CA6NKD9 419 aa7.94□□□□□ -1.14
PSEN1-211ENST00000554995 SOX1O00570 391 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-211ENST00000554995 GDF6Q6KF10 455 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-211ENST00000554995 PSAPL1Q6NUJ1 521 aa7.94□□□□□ -1.14
PSEN1-211ENST00000554995 MPRIPQ6WCQ1 1025 aa7.94□□□□□ -1.14
PSEN1-211ENST00000554995 LRP10Q7Z4F1 713 aa7.94□□□□□ -1.14
PSEN1-211ENST00000554995 PDZD3Q86UT5 571 aa7.94□□□□□ -1.14
PSEN1-211ENST00000554995 OR6P1Q8NGX9 317 aa7.94□□□□□ -1.14
PSEN1-211ENST00000554995 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
PSEN1-211ENST00000554995 ACTR10Q9NZ32 417 aa7.94□□□□□ -1.14
PSEN1-211ENST00000554995 H3BRJ5 948 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 TRIM37O94972 964 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 GSTP1P09211 210 aaKnown RBP7.93□□□□□ -1.14
PSEN1-211ENST00000554995 IMPDH2P12268 514 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 HSD3B2P26439 372 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 CABP4P57796 275 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 RPL6Q02878 288 aaKnown RBP7.93□□□□□ -1.14
PSEN1-211ENST00000554995 GAS6Q14393 721 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 SCARA3Q6AZY7 606 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 FCHSD1Q86WN1 690 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 ANKRD13AQ8IZ07 590 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 TTC9Q92623 222 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 RNPC3Q96LT9 517 aaKnown RBP7.93□□□□□ -1.14
PSEN1-211ENST00000554995 POLR3KQ9Y2Y1 108 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-211ENST00000554995 MSRB2Q9Y3D2 182 aa7.93□□□□□ -1.14
PSEN1-211ENST00000554995 NEURL1BA8MQ27 555 aa7.92□□□□□ -1.14
PSEN1-211ENST00000554995 KRT76Q01546 638 aa7.92□□□□□ -1.14
PSEN1-211ENST00000554995 AP3B2Q13367 1082 aa7.92□□□□□ -1.14
PSEN1-211ENST00000554995 DDR2Q16832 855 aa7.92□□□□□ -1.14
PSEN1-211ENST00000554995 MAP1SQ66K74 1059 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-211ENST00000554995 HGSNATQ68CP4 663 aa7.92□□□□□ -1.14
PSEN1-211ENST00000554995 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-211ENST00000554995 LSRQ86X29 649 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-211ENST00000554995 EHMT1Q9H9B1 1298 aa7.92□□□□□ -1.14
PSEN1-211ENST00000554995 PCDHB14Q9Y5E9 798 aa7.92□□□□□ -1.14
PSEN1-211ENST00000554995 ELOA3CA0A087WX78 387 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-211ENST00000554995 ELOA3DA6NLF2 546 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-211ENST00000554995 ENPP3O14638 875 aa7.91□□□□□ -1.14
PSEN1-211ENST00000554995 RGS9O75916 674 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-211ENST00000554995 CDC25BP30305 580 aa7.91□□□□□ -1.14
PSEN1-211ENST00000554995 ELOA3BQ3SY89 546 aa7.91□□□□□ -1.14
PSEN1-211ENST00000554995 CACTIN-AS1Q8N1I8 211 aa7.91□□□□□ -1.14
PSEN1-211ENST00000554995 RBBP8NLQ8NC74 664 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-211ENST00000554995 ELOA3Q8NG57 546 aa7.91□□□□□ -1.14
PSEN1-211ENST00000554995 NUDT8Q8WV74 236 aa7.91□□□□□ -1.14
PSEN1-211ENST00000554995 KCNB2Q92953 911 aa7.91□□□□□ -1.14
PSEN1-211ENST00000554995 CCDC113Q9H0I3 377 aa7.91□□□□□ -1.14
PSEN1-211ENST00000554995 SOX17Q9H6I2 414 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-211ENST00000554995 ST7Q9NRC1 585 aa7.91□□□□□ -1.14
PSEN1-211ENST00000554995 CACNA2D2Q9NY47 1150 aa7.91□□□□□ -1.14
PSEN1-211ENST00000554995 GRIN3BO60391 1043 aa7.9□□□□□ -1.14
PSEN1-211ENST00000554995 CLSTN1O94985 981 aa7.9□□□□□ -1.14
PSEN1-211ENST00000554995 MAP2K3P46734 347 aa7.9□□□□□ -1.14
PSEN1-211ENST00000554995 CDK8P49336 464 aa7.9□□□□□ -1.14
PSEN1-211ENST00000554995 GSTM4Q03013 218 aa7.9□□□□□ -1.14
PSEN1-211ENST00000554995 SLC7A3Q8WY07 619 aa7.9□□□□□ -1.14
PSEN1-211ENST00000554995 ZC3H12CQ9C0D7 883 aaKnown RBP7.9□□□□□ -1.14
PSEN1-211ENST00000554995 TNKS2Q9H2K2 1166 aa7.9□□□□□ -1.14
PSEN1-211ENST00000554995 MAPK8IP1Q9UQF2 711 aa7.9□□□□□ -1.14
PSEN1-211ENST00000554995 ATE1O95260 518 aa7.89□□□□□ -1.15
PSEN1-211ENST00000554995 SELPP16109 830 aa7.89□□□□□ -1.15
PSEN1-211ENST00000554995 GRIK5Q16478 980 aa7.89□□□□□ -1.15
PSEN1-211ENST00000554995 LARP1BQ659C4 914 aaKnown RBP7.89□□□□□ -1.15
PSEN1-211ENST00000554995 TXNDC11Q6PKC3 985 aa7.89□□□□□ -1.15
PSEN1-211ENST00000554995 GPBAR1Q8TDU6 330 aa7.89□□□□□ -1.15
PSEN1-211ENST00000554995 MBIPQ9NS73 344 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms