RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 RTCBQ9Y3I0 505 aaKnown RBP7.15□□□□□ -1.26
ATXN3-228ENST00000554592 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-228ENST00000554592 KCNMB2Q9Y691 235 aa7.15□□□□□ -1.26
ATXN3-228ENST00000554592 ANKARQ7Z5J8 1434 aa7.15□□□□□ -1.27
ATXN3-228ENST00000554592 MARF1Q9Y4F3 1742 aaKnown RBP7.15□□□□□ -1.27
ATXN3-228ENST00000554592 BRWD3Q6RI45 1802 aa7.15□□□□□ -1.27
ATXN3-228ENST00000554592 KRBA1A5PL33 1030 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 PLSCR1O15162 318 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 EPB42P16452 691 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 ALAS2P22557 587 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 BRD2P25440 801 aaKnown RBP7.14□□□□□ -1.27
ATXN3-228ENST00000554592 C1QTNF8P60827 252 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 ZC3H6P61129 1189 aaKnown RBP7.14□□□□□ -1.27
ATXN3-228ENST00000554592 SPATA31E1Q6ZUB1 1445 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 C8orf86Q6ZUL3 223 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 MICALL1Q8N3F8 863 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 MPHOSPH9Q99550 1183 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 PRDM6Q9NQX0 595 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 SEPT3Q9UH03 358 aa7.14□□□□□ -1.27
ATXN3-228ENST00000554592 GNEQ9Y223 722 aaKnown RBP7.14□□□□□ -1.27
ATXN3-228ENST00000554592 THRAP3Q9Y2W1 955 aaKnown RBP7.14□□□□□ -1.27
ATXN3-228ENST00000554592 NWD2Q9ULI1 1742 aa7.13□□□□□ -1.27
ATXN3-228ENST00000554592 KIF1AQ12756 1690 aa7.13□□□□□ -1.27
ATXN3-228ENST00000554592 PIK3C2GO75747 1445 aa7.13□□□□□ -1.27
ATXN3-228ENST00000554592 EIF3AQ14152 1382 aaKnown RBP7.13□□□□□ -1.27
ATXN3-228ENST00000554592 KIAA0232Q92628 1395 aa7.13□□□□□ -1.27
ATXN3-228ENST00000554592 ZBTB42B2RXF5 422 aa7.13□□□□□ -1.27
ATXN3-228ENST00000554592 ZBTB39O15060 712 aa7.13□□□□□ -1.27
ATXN3-228ENST00000554592 MAP3K6O95382 1288 aa7.13□□□□□ -1.27
ATXN3-228ENST00000554592 ALBP02768 609 aa7.13□□□□□ -1.27
ATXN3-228ENST00000554592 NFKB1P19838 968 aa7.13□□□□□ -1.27
ATXN3-228ENST00000554592 TARSP26639 723 aaKnown RBP7.13□□□□□ -1.27
ATXN3-228ENST00000554592 PLA2G4EQ3MJ16 856 aa7.13□□□□□ -1.27
ATXN3-228ENST00000554592 HIRIP3Q9BW71 556 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-228ENST00000554592 PRR36Q9H6K5 1346 aa7.12□□□□□ -1.27
ATXN3-228ENST00000554592 M0R082 166 aa7.12□□□□□ -1.27
ATXN3-228ENST00000554592 ARID4AP29374 1257 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-228ENST00000554592 RGL4Q8IZJ4 473 aa7.12□□□□□ -1.27
ATXN3-228ENST00000554592 ZNF417Q8TAU3 575 aa7.12□□□□□ -1.27
ATXN3-228ENST00000554592 ZNF587Q96SQ5 575 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-228ENST00000554592 SYT17Q9BSW7 474 aa7.12□□□□□ -1.27
ATXN3-228ENST00000554592 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
ATXN3-228ENST00000554592 NAGPAQ9UK23 515 aa7.12□□□□□ -1.27
ATXN3-228ENST00000554592 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
ATXN3-228ENST00000554592 TRAK1Q9UPV9 953 aa7.12□□□□□ -1.27
ATXN3-228ENST00000554592 KIF1BO60333 1816 aa7.12□□□□□ -1.27
ATXN3-228ENST00000554592 SASH3O75995 380 aa7.11□□□□□ -1.27
ATXN3-228ENST00000554592 ZBTB7AO95365 584 aa7.11□□□□□ -1.27
ATXN3-228ENST00000554592 IGHA1P01876 353 aa7.11□□□□□ -1.27
ATXN3-228ENST00000554592 TRIP4Q15650 581 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-228ENST00000554592 NUTM2GQ5VZR2 741 aa7.11□□□□□ -1.27
ATXN3-228ENST00000554592 KRT25Q7Z3Z0 450 aa7.11□□□□□ -1.27
ATXN3-228ENST00000554592 ALYREFQ86V81 257 aaKnown RBP7.11□□□□□ -1.27
ATXN3-228ENST00000554592 CCER1Q8TC90 406 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-228ENST00000554592 NUDT16Q96DE0 195 aaKnown RBP7.11□□□□□ -1.27
ATXN3-228ENST00000554592 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
ATXN3-228ENST00000554592 STIM2Q9P246 746 aa7.11□□□□□ -1.27
ATXN3-228ENST00000554592 FMN2Q9NZ56 1722 aa7.1□□□□□ -1.27
ATXN3-228ENST00000554592 NID1P14543 1247 aa7.1□□□□□ -1.27
ATXN3-228ENST00000554592 TMCO4Q5TGY1 634 aa7.1□□□□□ -1.27
ATXN3-228ENST00000554592 CMTR1Q8N1G2 835 aaKnown RBP7.1□□□□□ -1.27
ATXN3-228ENST00000554592 TRPM4Q8TD43 1214 aa7.1□□□□□ -1.27
ATXN3-228ENST00000554592 PNMA5Q96PV4 448 aa7.1□□□□□ -1.27
ATXN3-228ENST00000554592 PLVAPQ9BX97 442 aa7.1□□□□□ -1.27
ATXN3-228ENST00000554592 ADGRB2O60241 1585 aa7.1□□□□□ -1.27
ATXN3-228ENST00000554592 RGPD1P0DJD0 1748 aa7.1□□□□□ -1.27
ATXN3-228ENST00000554592 PIK3R2O00459 728 aa7.09□□□□□ -1.27
ATXN3-228ENST00000554592 XYLBO75191 536 aa7.09□□□□□ -1.27
ATXN3-228ENST00000554592 SERPINB4P48594 390 aa7.09□□□□□ -1.27
ATXN3-228ENST00000554592 DHX32Q7L7V1 743 aaKnown RBP7.09□□□□□ -1.27
ATXN3-228ENST00000554592 ABTB2Q8N961 1025 aa7.09□□□□□ -1.27
ATXN3-228ENST00000554592 PDGFDQ9GZP0 370 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-228ENST00000554592 IGFLR1Q9H665 355 aa7.09□□□□□ -1.27
ATXN3-228ENST00000554592 STK32BQ9NY57 414 aa7.09□□□□□ -1.27
ATXN3-228ENST00000554592 COL14A1Q05707 1796 aaKnown RBP7.09□□□□□ -1.27
ATXN3-228ENST00000554592 PLCH1Q4KWH8 1693 aa7.09□□□□□ -1.27
ATXN3-228ENST00000554592 THSD7AQ9UPZ6 1657 aa7.09□□□□□ -1.27
ATXN3-228ENST00000554592 SSH2Q76I76 1423 aa7.09□□□□□ -1.28
ATXN3-228ENST00000554592 GCP02774 474 aa7.08□□□□□ -1.28
ATXN3-228ENST00000554592 PROCP04070 461 aa7.08□□□□□ -1.28
ATXN3-228ENST00000554592 RARAP10276 462 aa7.08□□□□□ -1.28
ATXN3-228ENST00000554592 ZAP70P43403 619 aa7.08□□□□□ -1.28
ATXN3-228ENST00000554592 SLC15A2Q16348 729 aa7.08□□□□□ -1.28
ATXN3-228ENST00000554592 DDB1Q16531 1140 aa7.08□□□□□ -1.28
ATXN3-228ENST00000554592 NLRP13Q86W25 1043 aa7.08□□□□□ -1.28
ATXN3-228ENST00000554592 MTFR1LQ9H019 292 aa7.08□□□□□ -1.28
ATXN3-228ENST00000554592 NOP53Q9NZM5 478 aaKnown RBP7.08□□□□□ -1.28
ATXN3-228ENST00000554592 PPLO60437 1756 aa7.08□□□□□ -1.28
ATXN3-228ENST00000554592 CPDO75976 1380 aa7.08□□□□□ -1.28
ATXN3-228ENST00000554592 ACEP12821 1306 aa7.07□□□□□ -1.28
ATXN3-228ENST00000554592 GPLD1P80108 840 aa7.07□□□□□ -1.28
ATXN3-228ENST00000554592 TBC1D8BQ0IIM8 1120 aa7.07□□□□□ -1.28
ATXN3-228ENST00000554592 GRIK5Q16478 980 aa7.07□□□□□ -1.28
ATXN3-228ENST00000554592 TXNRD1Q16881 649 aa7.07□□□□□ -1.28
ATXN3-228ENST00000554592 SND1Q7KZF4 910 aaKnown RBP eCLIP7.07□□□□□ -1.28
ATXN3-228ENST00000554592 HELQQ8TDG4 1101 aa7.07□□□□□ -1.28
ATXN3-228ENST00000554592 CDK19Q9BWU1 502 aa7.07□□□□□ -1.28
ATXN3-228ENST00000554592 TLR7Q9NYK1 1049 aaKnown RBP7.07□□□□□ -1.28
ATXN3-228ENST00000554592 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
ATXN3-228ENST00000554592 DLC1Q96QB1 1528 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms