RNA–Protein interactions for RNA: ENST00000554338.1

RIPK3-202, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 5

Gene RIPK3, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-202ENST00000554338 MTX1Q13505 466 aa17.03■□□□□ 0.32
RIPK3-202ENST00000554338 CCL15Q16663 113 aa17.03■□□□□ 0.32
RIPK3-202ENST00000554338 CDC42EP5Q6NZY7 148 aa17.03■□□□□ 0.32
RIPK3-202ENST00000554338 CD99L2Q8TCZ2 262 aa17.03■□□□□ 0.32
RIPK3-202ENST00000554338 ZKSCAN4Q969J2 545 aaPredicted RBP17.03■□□□□ 0.32
RIPK3-202ENST00000554338 DENND2AQ9ULE3 1009 aa17.03■□□□□ 0.32
RIPK3-202ENST00000554338 SEMA3EO15041 775 aa17.02■□□□□ 0.32
RIPK3-202ENST00000554338 SRGAP3O43295 1099 aa17.02■□□□□ 0.32
RIPK3-202ENST00000554338 BCAR3O75815 825 aa17.02■□□□□ 0.32
RIPK3-202ENST00000554338 LDHBP07195 334 aaKnown RBP17.02■□□□□ 0.32
RIPK3-202ENST00000554338 GTF2A2P52657 109 aa17.02■□□□□ 0.32
RIPK3-202ENST00000554338 RASGRF1Q13972 1273 aa17.02■□□□□ 0.32
RIPK3-202ENST00000554338 CCDC102BQ68D86 513 aa17.02■□□□□ 0.32
RIPK3-202ENST00000554338 FAM43AQ8N2R8 423 aa17.02■□□□□ 0.32
RIPK3-202ENST00000554338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
RIPK3-202ENST00000554338 BRCA2P51587 3418 aa17.02■□□□□ 0.32
RIPK3-202ENST00000554338 MKI67P46013 3256 aaKnown RBP17.02■□□□□ 0.31
RIPK3-202ENST00000554338 PDE4DIPQ5VU43 2346 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 ZBTB22O15209 634 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 TCP10Q12799 353 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 DCAF15Q66K64 600 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 ATF7IPQ6VMQ6 1270 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 MIGA2Q7L4E1 593 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 FAM151AQ8WW52 585 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 HOOK2Q96ED9 719 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 ERO1AQ96HE7 468 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 FAM198AQ9UFP1 575 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 RFX7Q2KHR2 1363 aa17.01■□□□□ 0.31
RIPK3-202ENST00000554338 A0A1B0GUL7 405 aa17■□□□□ 0.31
RIPK3-202ENST00000554338 INPP5BP32019 993 aa17■□□□□ 0.31
RIPK3-202ENST00000554338 TIMM10P62072 90 aa17■□□□□ 0.31
RIPK3-202ENST00000554338 SP3Q02447 781 aa17■□□□□ 0.31
RIPK3-202ENST00000554338 TFCP2Q12800 502 aa17■□□□□ 0.31
RIPK3-202ENST00000554338 TAF1CQ15572 869 aaPredicted RBP17■□□□□ 0.31
RIPK3-202ENST00000554338 ERO1BQ86YB8 467 aa17■□□□□ 0.31
RIPK3-202ENST00000554338 FRAT1Q92837 279 aaPredicted RBP17■□□□□ 0.31
RIPK3-202ENST00000554338 ZNF341Q9BYN7 854 aa17■□□□□ 0.31
RIPK3-202ENST00000554338 GAKO14976 1311 aa16.99■□□□□ 0.31
RIPK3-202ENST00000554338 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
RIPK3-202ENST00000554338 IRF6O14896 467 aa16.99■□□□□ 0.31
RIPK3-202ENST00000554338 PPIL2Q13356 520 aa16.99■□□□□ 0.31
RIPK3-202ENST00000554338 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
RIPK3-202ENST00000554338 XAGE2Q96GT9 111 aa16.99■□□□□ 0.31
RIPK3-202ENST00000554338 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
RIPK3-202ENST00000554338 ATRNL1Q5VV63 1379 aa16.99■□□□□ 0.31
RIPK3-202ENST00000554338 MYH2Q9UKX2 1941 aa16.98■□□□□ 0.31
RIPK3-202ENST00000554338 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
RIPK3-202ENST00000554338 IPO8O15397 1037 aaKnown RBP16.98■□□□□ 0.31
RIPK3-202ENST00000554338 ZFPM1Q8IX07 1006 aa16.98■□□□□ 0.31
RIPK3-202ENST00000554338 ZGPATQ8N5A5 531 aaKnown RBP16.98■□□□□ 0.31
RIPK3-202ENST00000554338 EFCC1Q9HA90 598 aa16.98■□□□□ 0.31
RIPK3-202ENST00000554338 ZFYVE28Q9HCC9 887 aa16.98■□□□□ 0.31
RIPK3-202ENST00000554338 PTPN22Q9Y2R2 807 aa16.98■□□□□ 0.31
RIPK3-202ENST00000554338 DOCK2Q92608 1830 aa16.98■□□□□ 0.31
RIPK3-202ENST00000554338 BTBD19C9JJ37 291 aa16.97■□□□□ 0.31
RIPK3-202ENST00000554338 GNAI2P04899 355 aa16.97■□□□□ 0.31
RIPK3-202ENST00000554338 CETPP11597 493 aa16.97■□□□□ 0.31
RIPK3-202ENST00000554338 SNAPC2Q13487 334 aa16.97■□□□□ 0.31
RIPK3-202ENST00000554338 DZIP1Q86YF9 867 aaKnown RBP16.97■□□□□ 0.31
RIPK3-202ENST00000554338 ABCF2Q9UG63 623 aa16.97■□□□□ 0.31
RIPK3-202ENST00000554338 ZNF112Q9UJU3 913 aa16.97■□□□□ 0.31
RIPK3-202ENST00000554338 ZSWIM8A7E2V4 1837 aa16.96■□□□□ 0.31
RIPK3-202ENST00000554338 RGS3P49796 1198 aa16.96■□□□□ 0.31
RIPK3-202ENST00000554338 PPATQ06203 517 aa16.96■□□□□ 0.31
RIPK3-202ENST00000554338 MVPQ14764 893 aaKnown RBP16.96■□□□□ 0.31
RIPK3-202ENST00000554338 PI16Q6UXB8 463 aa16.96■□□□□ 0.31
RIPK3-202ENST00000554338 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.31
RIPK3-202ENST00000554338 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.96■□□□□ 0.31
RIPK3-202ENST00000554338 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.31
RIPK3-202ENST00000554338 NOL9Q5SY16 702 aaKnown RBP16.95■□□□□ 0.3
RIPK3-202ENST00000554338 ZNF384Q8TF68 577 aa16.95■□□□□ 0.3
RIPK3-202ENST00000554338 IDI2Q9BXS1 227 aa16.95■□□□□ 0.3
RIPK3-202ENST00000554338 ZCCHC17Q9NP64 241 aaKnown RBP16.95■□□□□ 0.3
RIPK3-202ENST00000554338 DDX4Q9NQI0 724 aaKnown RBP16.95■□□□□ 0.3
RIPK3-202ENST00000554338 AK9Q5TCS8 1911 aa16.95■□□□□ 0.3
RIPK3-202ENST00000554338 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
RIPK3-202ENST00000554338 WDHD1O75717 1129 aaPredicted RBP16.94■□□□□ 0.3
RIPK3-202ENST00000554338 BTDP43251 543 aa16.94■□□□□ 0.3
RIPK3-202ENST00000554338 HNRNPUQ00839 825 aaKnown RBP eCLIP16.94■□□□□ 0.3
RIPK3-202ENST00000554338 ZKSCAN2Q63HK3 967 aa16.94■□□□□ 0.3
RIPK3-202ENST00000554338 SH3BP5LQ7L8J4 393 aa16.94■□□□□ 0.3
RIPK3-202ENST00000554338 ARMC5Q96C12 935 aa16.94■□□□□ 0.3
RIPK3-202ENST00000554338 NEUROD6Q96NK8 337 aa16.94■□□□□ 0.3
RIPK3-202ENST00000554338 HMG20BQ9P0W2 317 aa16.94■□□□□ 0.3
RIPK3-202ENST00000554338 KCNH4Q9UQ05 1017 aa16.94■□□□□ 0.3
RIPK3-202ENST00000554338 RBBP6Q7Z6E9 1792 aaKnown RBP16.93■□□□□ 0.3
RIPK3-202ENST00000554338 POTEFA5A3E0 1075 aa16.93■□□□□ 0.3
RIPK3-202ENST00000554338 TLR2O60603 784 aa16.93■□□□□ 0.3
RIPK3-202ENST00000554338 ENTPD3O75355 529 aa16.93■□□□□ 0.3
RIPK3-202ENST00000554338 SLURP2P0DP57 97 aa16.93■□□□□ 0.3
RIPK3-202ENST00000554338 MECOMQ03112 1051 aa16.93■□□□□ 0.3
RIPK3-202ENST00000554338 MOGSQ13724 837 aa16.93■□□□□ 0.3
RIPK3-202ENST00000554338 MIER1Q8N108 512 aa16.93■□□□□ 0.3
RIPK3-202ENST00000554338 FAM163AQ96GL9 167 aaPredicted RBP16.93■□□□□ 0.3
RIPK3-202ENST00000554338 ARHGAP39Q9C0H5 1083 aa16.93■□□□□ 0.3
RIPK3-202ENST00000554338 DDTLA6NHG4 134 aaPredicted RBP16.92■□□□□ 0.3
RIPK3-202ENST00000554338 PHF20L1A8MW92 1017 aa16.92■□□□□ 0.3
RIPK3-202ENST00000554338 ARID4AP29374 1257 aaPredicted RBP16.92■□□□□ 0.3
RIPK3-202ENST00000554338 RHBDL3P58872 404 aa16.92■□□□□ 0.3
RIPK3-202ENST00000554338 SPTY2D1Q68D10 685 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms