RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 WDHD1O75717 1129 aaPredicted RBP23.28■■□□□ 1.32
CPSF2-203ENST00000554290 SP3Q02447 781 aa23.28■■□□□ 1.32
CPSF2-203ENST00000554290 DIXDC1Q155Q3 683 aa23.28■■□□□ 1.32
CPSF2-203ENST00000554290 CDC42EP5Q6NZY7 148 aa23.28■■□□□ 1.32
CPSF2-203ENST00000554290 ZGPATQ8N5A5 531 aaKnown RBP23.28■■□□□ 1.32
CPSF2-203ENST00000554290 ZKSCAN4Q969J2 545 aaPredicted RBP23.28■■□□□ 1.32
CPSF2-203ENST00000554290 ZNF341Q9BYN7 854 aa23.28■■□□□ 1.32
CPSF2-203ENST00000554290 AKAP2Q9Y2D5 859 aa23.28■■□□□ 1.32
CPSF2-203ENST00000554290 SNCAIPQ9Y6H5 919 aa23.28■■□□□ 1.32
CPSF2-203ENST00000554290 OTOFQ9HC10 1997 aa23.28■■□□□ 1.32
CPSF2-203ENST00000554290 ZBTB22O15209 634 aa23.27■■□□□ 1.32
CPSF2-203ENST00000554290 CETPP11597 493 aa23.27■■□□□ 1.32
CPSF2-203ENST00000554290 TAF1CQ15572 869 aaPredicted RBP23.27■■□□□ 1.32
CPSF2-203ENST00000554290 CCDC102BQ68D86 513 aa23.27■■□□□ 1.32
CPSF2-203ENST00000554290 CD99L2Q8TCZ2 262 aa23.27■■□□□ 1.32
CPSF2-203ENST00000554290 ZFYVE28Q9HCC9 887 aa23.27■■□□□ 1.32
CPSF2-203ENST00000554290 TIMM10P62072 90 aa23.26■■□□□ 1.31
CPSF2-203ENST00000554290 MTX1Q13505 466 aa23.26■■□□□ 1.31
CPSF2-203ENST00000554290 FRAT1Q92837 279 aaPredicted RBP23.26■■□□□ 1.31
CPSF2-203ENST00000554290 EFCC1Q9HA90 598 aa23.26■■□□□ 1.31
CPSF2-203ENST00000554290 USP40Q9NVE5 1235 aa23.26■■□□□ 1.31
CPSF2-203ENST00000554290 ADORA1P30542 326 aa23.25■■□□□ 1.31
CPSF2-203ENST00000554290 TCP10Q12799 353 aa23.25■■□□□ 1.31
CPSF2-203ENST00000554290 SNAPC2Q13487 334 aa23.25■■□□□ 1.31
CPSF2-203ENST00000554290 ARHGEF6Q15052 776 aa23.25■■□□□ 1.31
CPSF2-203ENST00000554290 MIGA2Q7L4E1 593 aa23.25■■□□□ 1.31
CPSF2-203ENST00000554290 MYH13Q9UKX3 1938 aa23.24■■□□□ 1.31
CPSF2-203ENST00000554290 TRIM27P14373 513 aa23.24■■□□□ 1.31
CPSF2-203ENST00000554290 ATF7IPQ6VMQ6 1270 aa23.24■■□□□ 1.31
CPSF2-203ENST00000554290 PTPN22Q9Y2R2 807 aa23.24■■□□□ 1.31
CPSF2-203ENST00000554290 A0A1B0GUL7 405 aa23.23■■□□□ 1.31
CPSF2-203ENST00000554290 IRF6O14896 467 aa23.23■■□□□ 1.31
CPSF2-203ENST00000554290 PPATQ06203 517 aa23.23■■□□□ 1.31
CPSF2-203ENST00000554290 TFCP2Q12800 502 aa23.23■■□□□ 1.31
CPSF2-203ENST00000554290 PPIL2Q13356 520 aa23.23■■□□□ 1.31
CPSF2-203ENST00000554290 MVPQ14764 893 aaKnown RBP23.23■■□□□ 1.31
CPSF2-203ENST00000554290 SPTY2D1Q68D10 685 aaPredicted RBP23.23■■□□□ 1.31
CPSF2-203ENST00000554290 SLF2Q8IX21 1173 aa23.23■■□□□ 1.31
CPSF2-203ENST00000554290 FAM43AQ8N2R8 423 aa23.23■■□□□ 1.31
CPSF2-203ENST00000554290 ZCCHC17Q9NP64 241 aaKnown RBP23.23■■□□□ 1.31
CPSF2-203ENST00000554290 PDS5AQ29RF7 1337 aaKnown RBP23.23■■□□□ 1.31
CPSF2-203ENST00000554290 BCAR3O75815 825 aa23.22■■□□□ 1.31
CPSF2-203ENST00000554290 GNAI2P04899 355 aa23.22■■□□□ 1.31
CPSF2-203ENST00000554290 NFIAQ12857 509 aa23.22■■□□□ 1.31
CPSF2-203ENST00000554290 RASGRF1Q13972 1273 aa23.22■■□□□ 1.31
CPSF2-203ENST00000554290 DZIP1Q86YF9 867 aaKnown RBP23.22■■□□□ 1.31
CPSF2-203ENST00000554290 FAM198AQ9UFP1 575 aa23.22■■□□□ 1.31
CPSF2-203ENST00000554290 ABCF2Q9UG63 623 aa23.22■■□□□ 1.31
CPSF2-203ENST00000554290 INPP5BP32019 993 aa23.21■■□□□ 1.31
CPSF2-203ENST00000554290 XAGE2Q96GT9 111 aa23.21■■□□□ 1.31
CPSF2-203ENST00000554290 ZNF112Q9UJU3 913 aa23.21■■□□□ 1.31
CPSF2-203ENST00000554290 CLUAP1Q96AJ1 413 aa23.2■■□□□ 1.3
CPSF2-203ENST00000554290 NEUROD6Q96NK8 337 aa23.2■■□□□ 1.3
CPSF2-203ENST00000554290 TNRC18O15417 2968 aaPredicted RBP23.19■■□□□ 1.3
CPSF2-203ENST00000554290 GAKO14976 1311 aa23.19■■□□□ 1.3
CPSF2-203ENST00000554290 BTBD19C9JJ37 291 aa23.19■■□□□ 1.3
CPSF2-203ENST00000554290 TLR2O60603 784 aa23.19■■□□□ 1.3
CPSF2-203ENST00000554290 ENTPD3O75355 529 aa23.19■■□□□ 1.3
CPSF2-203ENST00000554290 GORABQ5T7V8 394 aa23.19■■□□□ 1.3
CPSF2-203ENST00000554290 FAM163AQ96GL9 167 aaPredicted RBP23.19■■□□□ 1.3
CPSF2-203ENST00000554290 IDI2Q9BXS1 227 aa23.19■■□□□ 1.3
CPSF2-203ENST00000554290 G3BP1Q13283 466 aaKnown RBP eCLIP23.18■■□□□ 1.3
CPSF2-203ENST00000554290 RGS3P49796 1198 aa23.17■■□□□ 1.3
CPSF2-203ENST00000554290 KIF22Q14807 665 aa23.17■■□□□ 1.3
CPSF2-203ENST00000554290 NOL9Q5SY16 702 aaKnown RBP23.17■■□□□ 1.3
CPSF2-203ENST00000554290 ZKSCAN2Q63HK3 967 aa23.17■■□□□ 1.3
CPSF2-203ENST00000554290 ZFPM1Q8IX07 1006 aa23.17■■□□□ 1.3
CPSF2-203ENST00000554290 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.17■■□□□ 1.3
CPSF2-203ENST00000554290 TNNQ9UQP3 1299 aa23.17■■□□□ 1.3
CPSF2-203ENST00000554290 ERICH6Q7L0X2 663 aa23.16■■□□□ 1.3
CPSF2-203ENST00000554290 ZSCAN29Q8IWY8 852 aaPredicted RBP23.16■■□□□ 1.3
CPSF2-203ENST00000554290 KCNH4Q9UQ05 1017 aa23.16■■□□□ 1.3
CPSF2-203ENST00000554290 PNMA6EA0A0J9YXQ4 647 aa23.15■■□□□ 1.3
CPSF2-203ENST00000554290 BTDP43251 543 aa23.15■■□□□ 1.3
CPSF2-203ENST00000554290 ANKRD23Q86SG2 305 aa23.15■■□□□ 1.3
CPSF2-203ENST00000554290 ARMC5Q96C12 935 aa23.15■■□□□ 1.3
CPSF2-203ENST00000554290 HNRNPUQ00839 825 aaKnown RBP eCLIP23.14■■□□□ 1.29
CPSF2-203ENST00000554290 CAP1Q01518 475 aa23.14■■□□□ 1.29
CPSF2-203ENST00000554290 MECOMQ03112 1051 aa23.14■■□□□ 1.29
CPSF2-203ENST00000554290 TMEM57Q8N5G2 664 aa23.14■■□□□ 1.29
CPSF2-203ENST00000554290 SPATA5Q8NB90 893 aa23.14■■□□□ 1.29
CPSF2-203ENST00000554290 HMG20BQ9P0W2 317 aa23.14■■□□□ 1.29
CPSF2-203ENST00000554290 MROH7-TTC4A0A0A0MT08 1334 aa23.13■■□□□ 1.29
CPSF2-203ENST00000554290 LDHCP07864 332 aa23.13■■□□□ 1.29
CPSF2-203ENST00000554290 GSTO1P78417 241 aa23.13■■□□□ 1.29
CPSF2-203ENST00000554290 PRPF38BQ5VTL8 546 aaKnown RBP23.13■■□□□ 1.29
CPSF2-203ENST00000554290 NBPF11Q86T75 865 aa23.13■■□□□ 1.29
CPSF2-203ENST00000554290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.13■■□□□ 1.29
CPSF2-203ENST00000554290 GPR75-ASB3A0A0A6YYF3 556 aa23.12■■□□□ 1.29
CPSF2-203ENST00000554290 PDHXO00330 501 aa23.12■■□□□ 1.29
CPSF2-203ENST00000554290 CXCL11O14625 94 aa23.12■■□□□ 1.29
CPSF2-203ENST00000554290 GNRH1P01148 92 aa23.12■■□□□ 1.29
CPSF2-203ENST00000554290 LACTBP83111 547 aaPredicted RBP23.12■■□□□ 1.29
CPSF2-203ENST00000554290 PICK1Q9NRD5 415 aa23.12■■□□□ 1.29
CPSF2-203ENST00000554290 AK9Q5TCS8 1911 aa23.12■■□□□ 1.29
CPSF2-203ENST00000554290 PHF20L1A8MW92 1017 aa23.11■■□□□ 1.29
CPSF2-203ENST00000554290 MAP4K4O95819 1239 aaPredicted RBP23.11■■□□□ 1.29
CPSF2-203ENST00000554290 UQCRFS1P1P0C7P4 283 aa23.11■■□□□ 1.29
CPSF2-203ENST00000554290 ARID4AP29374 1257 aaPredicted RBP23.11■■□□□ 1.29
CPSF2-203ENST00000554290 MAP3K10Q02779 954 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms