RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTPN21-204ENST00000554178 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
PTPN21-204ENST00000554178 ZFYVE28Q9HCC9 887 aa12.33□□□□□ -0.44
PTPN21-204ENST00000554178 CSADQ9Y600 493 aa12.33□□□□□ -0.44
PTPN21-204ENST00000554178 FKBP1AP62942 108 aaKnown RBP12.32□□□□□ -0.44
PTPN21-204ENST00000554178 CCDC57Q2TAC2 916 aa12.32□□□□□ -0.44
PTPN21-204ENST00000554178 WWC1Q8IX03 1113 aa12.32□□□□□ -0.44
PTPN21-204ENST00000554178 ZKSCAN4Q969J2 545 aaPredicted RBP12.32□□□□□ -0.44
PTPN21-204ENST00000554178 SHISA4Q96DD7 197 aa12.32□□□□□ -0.44
PTPN21-204ENST00000554178 WRNIP1Q96S55 665 aa12.32□□□□□ -0.44
PTPN21-204ENST00000554178 CHMP4AQ9BY43 222 aa12.32□□□□□ -0.44
PTPN21-204ENST00000554178 SNCAIPQ9Y6H5 919 aa12.32□□□□□ -0.44
PTPN21-204ENST00000554178 FAM205AQ6ZU69 1335 aa12.32□□□□□ -0.44
PTPN21-204ENST00000554178 BTBD19C9JJ37 291 aa12.31□□□□□ -0.44
PTPN21-204ENST00000554178 GTF2A2P52657 109 aa12.31□□□□□ -0.44
PTPN21-204ENST00000554178 MTFR1Q15390 333 aa12.31□□□□□ -0.44
PTPN21-204ENST00000554178 BEND3Q5T5X7 828 aa12.31□□□□□ -0.44
PTPN21-204ENST00000554178 SERPINA10Q9UK55 444 aa12.31□□□□□ -0.44
PTPN21-204ENST00000554178 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
PTPN21-204ENST00000554178 RANBP2P49792 3224 aaKnown RBP12.3□□□□□ -0.44
PTPN21-204ENST00000554178 SPDYE5A6NIY4 337 aa12.3□□□□□ -0.44
PTPN21-204ENST00000554178 GRM8O00222 908 aa12.3□□□□□ -0.44
PTPN21-204ENST00000554178 CTGFP29279 349 aa12.3□□□□□ -0.44
PTPN21-204ENST00000554178 HIBADHP31937 336 aaKnown RBP12.3□□□□□ -0.44
PTPN21-204ENST00000554178 TNNI2P48788 182 aa12.3□□□□□ -0.44
PTPN21-204ENST00000554178 MAP3K9P80192 1104 aa12.3□□□□□ -0.44
PTPN21-204ENST00000554178 LACTBP83111 547 aaPredicted RBP12.3□□□□□ -0.44
PTPN21-204ENST00000554178 EXOSC9Q06265 439 aaKnown RBP12.3□□□□□ -0.44
PTPN21-204ENST00000554178 SLC4A10Q6U841 1118 aa12.3□□□□□ -0.44
PTPN21-204ENST00000554178 NBPF11Q86T75 865 aa12.3□□□□□ -0.44
PTPN21-204ENST00000554178 TDRD7Q8NHU6 1098 aaKnown RBP12.3□□□□□ -0.44
PTPN21-204ENST00000554178 CPA4Q9UI42 421 aa12.3□□□□□ -0.44
PTPN21-204ENST00000554178 UNCXA6NJT0 531 aa12.29□□□□□ -0.44
PTPN21-204ENST00000554178 IRF6O14896 467 aa12.29□□□□□ -0.44
PTPN21-204ENST00000554178 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.29□□□□□ -0.44
PTPN21-204ENST00000554178 SUCLG2Q96I99 432 aa12.29□□□□□ -0.44
PTPN21-204ENST00000554178 FAM84BQ96KN1 310 aaPredicted RBP12.29□□□□□ -0.44
PTPN21-204ENST00000554178 TLR2O60603 784 aa12.28□□□□□ -0.44
PTPN21-204ENST00000554178 FRAT2O75474 233 aaPredicted RBP12.28□□□□□ -0.44
PTPN21-204ENST00000554178 SEC24BO95487 1268 aa12.28□□□□□ -0.44
PTPN21-204ENST00000554178 INPP5BP32019 993 aa12.28□□□□□ -0.44
PTPN21-204ENST00000554178 KIF22Q14807 665 aa12.28□□□□□ -0.44
PTPN21-204ENST00000554178 MIGA2Q7L4E1 593 aa12.28□□□□□ -0.44
PTPN21-204ENST00000554178 VPS37DQ86XT2 251 aa12.28□□□□□ -0.44
PTPN21-204ENST00000554178 C9orf78Q9NZ63 289 aaPredicted RBP12.28□□□□□ -0.44
PTPN21-204ENST00000554178 DDX60LQ5H9U9 1706 aaKnown RBP12.28□□□□□ -0.44
PTPN21-204ENST00000554178 VAMP4O75379 141 aa12.27□□□□□ -0.45
PTPN21-204ENST00000554178 CETPP11597 493 aa12.27□□□□□ -0.45
PTPN21-204ENST00000554178 SNAPC2Q13487 334 aa12.27□□□□□ -0.45
PTPN21-204ENST00000554178 LRRC24Q50LG9 513 aa12.27□□□□□ -0.45
PTPN21-204ENST00000554178 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.45
PTPN21-204ENST00000554178 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.45
PTPN21-204ENST00000554178 DPF3Q92784 378 aa12.27□□□□□ -0.45
PTPN21-204ENST00000554178 TEKT1Q969V4 418 aa12.27□□□□□ -0.45
PTPN21-204ENST00000554178 TRIM47Q96LD4 638 aa12.27□□□□□ -0.45
PTPN21-204ENST00000554178 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.45
PTPN21-204ENST00000554178 RBM27Q9P2N5 1060 aaKnown RBP12.27□□□□□ -0.45
PTPN21-204ENST00000554178 OSBPP22059 807 aa12.26□□□□□ -0.45
PTPN21-204ENST00000554178 PSMC4P43686 418 aa12.26□□□□□ -0.45
PTPN21-204ENST00000554178 UBE4AQ14139 1066 aa12.26□□□□□ -0.45
PTPN21-204ENST00000554178 ARHGEF6Q15052 776 aa12.26□□□□□ -0.45
PTPN21-204ENST00000554178 CCDC27Q2M243 656 aa12.26□□□□□ -0.45
PTPN21-204ENST00000554178 METTL24Q5JXM2 366 aa12.26□□□□□ -0.45
PTPN21-204ENST00000554178 ERO1BQ86YB8 467 aa12.26□□□□□ -0.45
PTPN21-204ENST00000554178 KAZALD1Q96I82 304 aa12.26□□□□□ -0.45
PTPN21-204ENST00000554178 BICC1Q9H694 974 aaKnown RBP12.26□□□□□ -0.45
PTPN21-204ENST00000554178 MYPNQ86TC9 1320 aa12.26□□□□□ -0.45
PTPN21-204ENST00000554178 LOC285556D6RIA3 1793 aa12.25□□□□□ -0.45
PTPN21-204ENST00000554178 FRMPD3Q5JV73 1810 aa12.25□□□□□ -0.45
PTPN21-204ENST00000554178 WDHD1O75717 1129 aaPredicted RBP12.25□□□□□ -0.45
PTPN21-204ENST00000554178 FMNL1O95466 1100 aaPredicted RBP12.25□□□□□ -0.45
PTPN21-204ENST00000554178 TCP10Q12799 353 aa12.25□□□□□ -0.45
PTPN21-204ENST00000554178 PPIL2Q13356 520 aa12.25□□□□□ -0.45
PTPN21-204ENST00000554178 RAET1EQ8TD07 263 aa12.25□□□□□ -0.45
PTPN21-204ENST00000554178 BIN2Q9UBW5 565 aaPredicted RBP12.25□□□□□ -0.45
PTPN21-204ENST00000554178 IL16Q14005 1332 aa12.25□□□□□ -0.45
PTPN21-204ENST00000554178 ADGRA2Q96PE1 1338 aa12.25□□□□□ -0.45
PTPN21-204ENST00000554178 RPAP1Q9BWH6 1393 aaPredicted RBP12.25□□□□□ -0.45
PTPN21-204ENST00000554178 CDK5RAP2Q96SN8 1893 aa12.25□□□□□ -0.45
PTPN21-204ENST00000554178 COL6A3P12111 3177 aa12.24□□□□□ -0.45
PTPN21-204ENST00000554178 PDHXO00330 501 aa12.24□□□□□ -0.45
PTPN21-204ENST00000554178 PLXNB2O15031 1838 aa12.24□□□□□ -0.45
PTPN21-204ENST00000554178 NBPF7P0C2Y1 421 aaPredicted RBP12.24□□□□□ -0.45
PTPN21-204ENST00000554178 CCL5P13501 91 aa12.24□□□□□ -0.45
PTPN21-204ENST00000554178 BCAMP50895 628 aa12.24□□□□□ -0.45
PTPN21-204ENST00000554178 PRKCZQ05513 592 aa12.24□□□□□ -0.45
PTPN21-204ENST00000554178 MAMSTRQ6ZN01 415 aa12.24□□□□□ -0.45
PTPN21-204ENST00000554178 SRCIN1Q9C0H9 1055 aa12.24□□□□□ -0.45
PTPN21-204ENST00000554178 SRRDQ9UH36 339 aa12.24□□□□□ -0.45
PTPN21-204ENST00000554178 RIPOR2Q9Y4F9 1068 aa12.24□□□□□ -0.45
PTPN21-204ENST00000554178 MROH5Q6ZUA9 1318 aa12.23□□□□□ -0.45
PTPN21-204ENST00000554178 CYP2C8P10632 490 aa12.23□□□□□ -0.45
PTPN21-204ENST00000554178 GRK4P32298 578 aa12.23□□□□□ -0.45
PTPN21-204ENST00000554178 DIXDC1Q155Q3 683 aa12.23□□□□□ -0.45
PTPN21-204ENST00000554178 DCAF15Q66K64 600 aa12.23□□□□□ -0.45
PTPN21-204ENST00000554178 APOBEC3HQ6NTF7 200 aaKnown RBP12.23□□□□□ -0.45
PTPN21-204ENST00000554178 C17orf99Q6UX52 265 aa12.23□□□□□ -0.45
PTPN21-204ENST00000554178 ZDHHC15Q96MV8 337 aa12.23□□□□□ -0.45
PTPN21-204ENST00000554178 ZNF341Q9BYN7 854 aa12.23□□□□□ -0.45
PTPN21-204ENST00000554178 RNF208Q9H0X6 261 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms