RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 CHST3Q7LGC8 479 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 WDR63Q8IWG1 891 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 MAGEB6Q8N7X4 407 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 SH3TC2Q8TF17 1288 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 XAGE2Q96GT9 111 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 ISCA1Q9BUE6 129 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 COA1Q9GZY4 146 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 ZMYND15Q9H091 742 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.04□□□□□ -1.92
PRPF39-205ENST00000554081 PRDM5Q9NQX1 630 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-205ENST00000554081 BSDC1Q9NW68 430 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-205ENST00000554081 KDRP35968 1356 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 CICQ96RK0 1608 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-205ENST00000554081 LAMA3Q16787 3333 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 PNMA6EA0A0J9YXQ4 647 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 RANBP6O60518 1105 aaKnown RBP3.03□□□□□ -1.92
PRPF39-205ENST00000554081 NFIAQ12857 509 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 GRIK5Q16478 980 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 C20orf194Q5TEA3 1177 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 USP50Q70EL3 339 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-205ENST00000554081 EEPD1Q7L9B9 569 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 SDR42E1Q8WUS8 393 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 USP44Q9H0E7 712 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 RNF208Q9H0X6 261 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 CABP5Q9NP86 173 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 LEMD3Q9Y2U8 911 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 IVNS1ABPQ9Y6Y0 642 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 PXDNLA1KZ92 1463 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 PARP4Q9UKK3 1724 aaKnown RBP3.03□□□□□ -1.92
PRPF39-205ENST00000554081 TNPO2O14787 897 aaKnown RBP3.03□□□□□ -1.92
PRPF39-205ENST00000554081 PDE8BO95263 885 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 BAG3O95817 575 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 HLA-DOAP06340 250 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 BTDP43251 543 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 ZAP70P43403 619 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 RARSP54136 660 aaKnown RBP3.03□□□□□ -1.92
PRPF39-205ENST00000554081 HMGCS2P54868 508 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 DYNLL1P63167 89 aaKnown RBP3.03□□□□□ -1.92
PRPF39-205ENST00000554081 SP4Q02446 784 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 SLFN5Q08AF3 891 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 FSTL1Q12841 308 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 PUM3Q15397 648 aaKnown RBP3.03□□□□□ -1.92
PRPF39-205ENST00000554081 BEND3Q5T5X7 828 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 CST9Q5W186 159 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 CCDC102BQ68D86 513 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 SAPCD2Q86UD0 394 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 SKAP1Q86WV1 359 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 RAB11FIP4Q86YS3 637 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 ANKRD13CQ8N6S4 541 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 CD99L2Q8TCZ2 262 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 OPTNQ96CV9 577 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 FAM84BQ96KN1 310 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-205ENST00000554081 UIMC1Q96RL1 719 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 ARID3AQ99856 593 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 AKAP2Q9Y2D5 859 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 KIF16BQ96L93 1317 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 LRP5O75197 1615 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 RGPD2P0DJD1 1756 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 ASXL3Q9C0F0 2248 aa3.03□□□□□ -1.92
PRPF39-205ENST00000554081 ABCC6O95255 1503 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 TFRCP02786 760 aaKnown RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 LDHCP07864 332 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 MAP3K12Q12852 859 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 SF3B3Q15393 1217 aaKnown RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 SKIV2LQ15477 1246 aaKnown RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 CCDC96Q2M329 555 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 AK9Q5TCS8 1911 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 CLEC10AQ8IUN9 316 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 MRPL50Q8N5N7 158 aaKnown RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 CCDC102AQ96A19 550 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 CCDC136Q96JN2 1154 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 TMOD4Q9NZQ9 345 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 CASP8AP2Q9UKL3 1982 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 LTN1O94822 1766 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 SLIT3O75094 1523 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 CYP2D7A0A087X1C5 515 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 POTECB2RU33 542 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 FZD9O00144 591 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 ELNP15502 786 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 SYN1P17600 705 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 IL15P40933 162 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 MVPQ14764 893 aaKnown RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 NCAPG2Q86XI2 1143 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 MICALL1Q8N3F8 863 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 RGS22Q8NE09 1264 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 WDR66Q8TBY9 1149 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 LPIN2Q92539 896 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 FERMT2Q96AC1 680 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 ABHD8Q96I13 439 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 GPATCH3Q96I76 525 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 PSMD1Q99460 953 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 ZNF70Q9UC06 446 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 GVINP1Q7Z2Y8 2422 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 LAMA2P24043 3122 aaKnown RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 ERBB4Q15303 1308 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 H7C1W4 665 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 IRF6O14896 467 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 DTNBO60941 627 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 RLBP1P12271 317 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 PSMC4P43686 418 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms