RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 CCDC102BQ68D86 513 aa11.24□□□□□ -0.61
SDR39U1-207ENST00000553937 FAM83AQ86UY5 434 aa11.24□□□□□ -0.61
SDR39U1-207ENST00000553937 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.24□□□□□ -0.61
SDR39U1-207ENST00000553937 PANK1Q8TE04 598 aa11.24□□□□□ -0.61
SDR39U1-207ENST00000553937 CNKSR2Q8WXI2 1034 aa11.24□□□□□ -0.61
SDR39U1-207ENST00000553937 DAGLAQ9Y4D2 1042 aa11.24□□□□□ -0.61
SDR39U1-207ENST00000553937 SALL1Q9NSC2 1324 aa11.24□□□□□ -0.61
SDR39U1-207ENST00000553937 A0A1B0GUL7 405 aa11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 LDHBP07195 334 aaKnown RBP11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 TIMM10P62072 90 aa11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 TFCP2Q12800 502 aa11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 ZKSCAN2Q63HK3 967 aa11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 TMEM57Q8N5G2 664 aa11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 DENND2AQ9ULE3 1009 aa11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 HPS5Q9UPZ3 1129 aa11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 CSADQ9Y600 493 aa11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 HTTP42858 3142 aa11.23□□□□□ -0.61
SDR39U1-207ENST00000553937 PNMA6EA0A0J9YXQ4 647 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 TESPA1A2RU30 521 aaPredicted RBP11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 MGAMO43451 1857 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 GNAI2P04899 355 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 SOX10P56693 466 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 CRHR2Q13324 411 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 RASGRF1Q13972 1273 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 PKN2Q16513 984 aaKnown RBP11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 C20orf194Q5TEA3 1177 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 PDE4DIPQ5VU43 2346 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 CDC42EP5Q6NZY7 148 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 OTUD5Q96G74 571 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 WRNIP1Q96S55 665 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 PTPN18Q99952 460 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 SNCAIPQ9Y6H5 919 aa11.22□□□□□ -0.61
SDR39U1-207ENST00000553937 PDS5AQ29RF7 1337 aaKnown RBP11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 CCL15-CCL14A0A0B4J2E2 113 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 SPDYE5A6NIY4 337 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 ZBTB22O15209 634 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 TCP10Q12799 353 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 NFIAQ12857 509 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 CCL15Q16663 113 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 DCAF15Q66K64 600 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 OTUD7BQ6GQQ9 843 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 FAM151AQ8WW52 585 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 BRI3BPQ8WY22 251 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 ZKSCAN4Q969J2 545 aaPredicted RBP11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 HOOK2Q96ED9 719 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 XAGE2Q96GT9 111 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 AKAP2Q9Y2D5 859 aa11.21□□□□□ -0.61
SDR39U1-207ENST00000553937 CENPFP49454 3210 aa11.21□□□□□ -0.62
SDR39U1-207ENST00000553937 RFX7Q2KHR2 1363 aa11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 GTF2A2P52657 109 aa11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 MVPQ14764 893 aaKnown RBP11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 FBXO46Q6PJ61 603 aaPredicted RBP11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 MIGA2Q7L4E1 593 aa11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 FTSJ3Q8IY81 847 aaKnown RBP11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 ZGPATQ8N5A5 531 aaKnown RBP11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 NEUROD6Q96NK8 337 aa11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 ZNF341Q9BYN7 854 aa11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 FAM198AQ9UFP1 575 aa11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 ABCF2Q9UG63 623 aa11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 SIPA1L1O43166 1804 aa11.2□□□□□ -0.62
SDR39U1-207ENST00000553937 GAKO14976 1311 aa11.19□□□□□ -0.62
SDR39U1-207ENST00000553937 INPP5BP32019 993 aa11.19□□□□□ -0.62
SDR39U1-207ENST00000553937 ERO1BQ86YB8 467 aa11.19□□□□□ -0.62
SDR39U1-207ENST00000553937 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
SDR39U1-207ENST00000553937 ITPRIPQ8IWB1 547 aa11.19□□□□□ -0.62
SDR39U1-207ENST00000553937 FAM43AQ8N2R8 423 aa11.19□□□□□ -0.62
SDR39U1-207ENST00000553937 CD99L2Q8TCZ2 262 aa11.19□□□□□ -0.62
SDR39U1-207ENST00000553937 C1orf115Q9H7X2 142 aa11.19□□□□□ -0.62
SDR39U1-207ENST00000553937 TRIM17Q9Y577 477 aa11.19□□□□□ -0.62
SDR39U1-207ENST00000553937 ATRNL1Q5VV63 1379 aa11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 MROH7-TTC4A0A0A0MT08 1334 aa11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 MYH1P12882 1939 aa11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 IRF6O14896 467 aa11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 RGS3P49796 1198 aa11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 TAF1CQ15572 869 aaPredicted RBP11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 PI16Q6UXB8 463 aa11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 OTOP1Q7RTM1 612 aa11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 ZFPM1Q8IX07 1006 aa11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 ERO1AQ96HE7 468 aa11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 HMG20BQ9P0W2 317 aa11.18□□□□□ -0.62
SDR39U1-207ENST00000553937 CETPP11597 493 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 ARID4AP29374 1257 aaPredicted RBP11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 BTDP43251 543 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 CAP1Q01518 475 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 SP3Q02447 781 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 MECOMQ03112 1051 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 PPIL2Q13356 520 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 POLA2Q14181 598 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 GORABQ5T7V8 394 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 SPTY2D1Q68D10 685 aaPredicted RBP11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 SPATA5Q8NB90 893 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 ZNF384Q8TF68 577 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 IDI2Q9BXS1 227 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 ZNF112Q9UJU3 913 aa11.17□□□□□ -0.62
SDR39U1-207ENST00000553937 COG6Q9Y2V7 657 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms