RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 HP1BP3Q5SSJ5 553 aaPredicted RBP5.29□□□□□ -1.56
SRP54-204ENST00000553923 KIAA0319Q5VV43 1072 aa5.29□□□□□ -1.56
SRP54-204ENST00000553923 PLD6Q8N2A8 252 aaKnown RBP5.29□□□□□ -1.56
SRP54-204ENST00000553923 ZFYVE1Q9HBF4 777 aa5.29□□□□□ -1.56
SRP54-204ENST00000553923 RAD18Q9NS91 495 aa5.29□□□□□ -1.56
SRP54-204ENST00000553923 AP4E1Q9UPM8 1137 aa5.29□□□□□ -1.56
SRP54-204ENST00000553923 BIN1O00499 593 aa5.28□□□□□ -1.56
SRP54-204ENST00000553923 TMPRSS2O15393 492 aa5.28□□□□□ -1.56
SRP54-204ENST00000553923 ITPKAP23677 461 aa5.28□□□□□ -1.56
SRP54-204ENST00000553923 PHLDB3Q6NSJ2 640 aa5.28□□□□□ -1.56
SRP54-204ENST00000553923 CILP2Q8IUL8 1156 aa5.28□□□□□ -1.56
SRP54-204ENST00000553923 CORO1BQ9BR76 489 aa5.28□□□□□ -1.56
SRP54-204ENST00000553923 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
SRP54-204ENST00000553923 ZNF576Q9H609 170 aa5.28□□□□□ -1.56
SRP54-204ENST00000553923 LGR6Q9HBX8 967 aa5.28□□□□□ -1.56
SRP54-204ENST00000553923 DAGLAQ9Y4D2 1042 aa5.28□□□□□ -1.56
SRP54-204ENST00000553923 FARP2O94887 1054 aaPredicted RBP5.27□□□□□ -1.57
SRP54-204ENST00000553923 PRKCQQ04759 706 aa5.27□□□□□ -1.57
SRP54-204ENST00000553923 CYP27C1Q4G0S4 372 aa5.27□□□□□ -1.57
SRP54-204ENST00000553923 USPL1Q5W0Q7 1092 aa5.27□□□□□ -1.57
SRP54-204ENST00000553923 NETO1Q8TDF5 533 aa5.27□□□□□ -1.57
SRP54-204ENST00000553923 TMEM40Q8WWA1 233 aa5.27□□□□□ -1.57
SRP54-204ENST00000553923 FAM168AQ92567 244 aa5.27□□□□□ -1.57
SRP54-204ENST00000553923 CRIM1Q9NZV1 1036 aa5.27□□□□□ -1.57
SRP54-204ENST00000553923 VAV3Q9UKW4 847 aa5.27□□□□□ -1.57
SRP54-204ENST00000553923 CD96P40200 585 aa5.26□□□□□ -1.57
SRP54-204ENST00000553923 FKBP4Q02790 459 aaKnown RBP eCLIP5.26□□□□□ -1.57
SRP54-204ENST00000553923 MESP2Q0VG99 397 aa5.26□□□□□ -1.57
SRP54-204ENST00000553923 CDK5R2Q13319 367 aa5.26□□□□□ -1.57
SRP54-204ENST00000553923 SF3B2Q13435 895 aaKnown RBP5.26□□□□□ -1.57
SRP54-204ENST00000553923 AAMPQ13685 434 aa5.26□□□□□ -1.57
SRP54-204ENST00000553923 FAM181AQ8N9Y4 354 aa5.26□□□□□ -1.57
SRP54-204ENST00000553923 LRRN4CLQ8ND94 238 aa5.26□□□□□ -1.57
SRP54-204ENST00000553923 WDR89Q96FK6 387 aaPredicted RBP5.26□□□□□ -1.57
SRP54-204ENST00000553923 PCDHGC5Q9Y5F6 944 aa5.26□□□□□ -1.57
SRP54-204ENST00000553923 FAM87AP0C7U9 286 aa5.25□□□□□ -1.57
SRP54-204ENST00000553923 OXCT1P55809 520 aa5.25□□□□□ -1.57
SRP54-204ENST00000553923 PTPN12Q05209 780 aaKnown RBP5.25□□□□□ -1.57
SRP54-204ENST00000553923 ECM1Q16610 540 aa5.25□□□□□ -1.57
SRP54-204ENST00000553923 FANCD2OSQ96PS1 177 aa5.25□□□□□ -1.57
SRP54-204ENST00000553923 RC3H2Q9HBD1 1191 aaKnown RBP5.25□□□□□ -1.57
SRP54-204ENST00000553923 MKNK2Q9HBH9 465 aa5.25□□□□□ -1.57
SRP54-204ENST00000553923 PLAGL2Q9UPG8 496 aa5.25□□□□□ -1.57
SRP54-204ENST00000553923 ZNF862O60290 1169 aa5.24□□□□□ -1.57
SRP54-204ENST00000553923 LIG1P18858 919 aa5.24□□□□□ -1.57
SRP54-204ENST00000553923 AP3B2Q13367 1082 aa5.24□□□□□ -1.57
SRP54-204ENST00000553923 DDX54Q8TDD1 881 aaKnown RBP5.24□□□□□ -1.57
SRP54-204ENST00000553923 CCDC86Q9H6F5 360 aaKnown RBP5.24□□□□□ -1.57
SRP54-204ENST00000553923 DISC1Q9NRI5 854 aa5.24□□□□□ -1.57
SRP54-204ENST00000553923 SERPINA10Q9UK55 444 aa5.24□□□□□ -1.57
SRP54-204ENST00000553923 LEFTY1O75610 366 aa5.23□□□□□ -1.57
SRP54-204ENST00000553923 FAAP100Q0VG06 881 aa5.23□□□□□ -1.57
SRP54-204ENST00000553923 PDE3AQ14432 1141 aa5.23□□□□□ -1.57
SRP54-204ENST00000553923 PI4K2BQ8TCG2 481 aa5.23□□□□□ -1.57
SRP54-204ENST00000553923 ABCB6Q9NP58 842 aa5.23□□□□□ -1.57
SRP54-204ENST00000553923 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.23□□□□□ -1.57
SRP54-204ENST00000553923 ID3Q02535 119 aa5.22□□□□□ -1.57
SRP54-204ENST00000553923 IFI16Q16666 785 aaKnown RBP5.22□□□□□ -1.57
SRP54-204ENST00000553923 AOC3Q16853 763 aa5.22□□□□□ -1.57
SRP54-204ENST00000553923 KIF4BQ2VIQ3 1234 aa5.22□□□□□ -1.57
SRP54-204ENST00000553923 FAM214BQ7L5A3 538 aa5.22□□□□□ -1.57
SRP54-204ENST00000553923 FLAD1Q8NFF5 587 aa5.22□□□□□ -1.57
SRP54-204ENST00000553923 BHLHE22Q8NFJ8 381 aaPredicted RBP5.22□□□□□ -1.57
SRP54-204ENST00000553923 DUSP23Q9BVJ7 150 aa5.22□□□□□ -1.57
SRP54-204ENST00000553923 TNKS2Q9H2K2 1166 aa5.22□□□□□ -1.57
SRP54-204ENST00000553923 ANO2Q9NQ90 1003 aa5.22□□□□□ -1.57
SRP54-204ENST00000553923 ZNF503-AS2A6NEH8 195 aa5.21□□□□□ -1.58
SRP54-204ENST00000553923 CEACAM5P06731 702 aa5.21□□□□□ -1.58
SRP54-204ENST00000553923 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
SRP54-204ENST00000553923 RPS26P11Q5JNZ5 115 aaPredicted RBP5.21□□□□□ -1.58
SRP54-204ENST00000553923 PRPF40BQ6NWY9 871 aaKnown RBP5.21□□□□□ -1.58
SRP54-204ENST00000553923 KSR1Q8IVT5 923 aa5.21□□□□□ -1.58
SRP54-204ENST00000553923 SMYD4Q8IYR2 804 aaPredicted RBP5.21□□□□□ -1.58
SRP54-204ENST00000553923 CCDC97Q96F63 343 aaPredicted RBP5.21□□□□□ -1.58
SRP54-204ENST00000553923 EHD4Q9H223 541 aa5.21□□□□□ -1.58
SRP54-204ENST00000553923 ATXN3LQ9H3M9 355 aa5.21□□□□□ -1.58
SRP54-204ENST00000553923 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.2□□□□□ -1.58
SRP54-204ENST00000553923 IGHA2P01877 340 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 ZNF211Q13398 564 aaPredicted RBP5.2□□□□□ -1.58
SRP54-204ENST00000553923 ORC1Q13415 861 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 TTLL4Q14679 1199 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 SLC23A3Q6PIS1 610 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 PDZD3Q86UT5 571 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 C1QL4Q86Z23 238 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 FAM84AQ96KN4 292 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 HRASLS5Q96KN8 279 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 HEXIM2Q96MH2 286 aaKnown RBP5.2□□□□□ -1.58
SRP54-204ENST00000553923 KRTAP4-5Q9BYR2 181 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 NPHS2Q9NP85 383 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 KRT82Q9NSB4 513 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 PCOLCE2Q9UKZ9 415 aa5.2□□□□□ -1.58
SRP54-204ENST00000553923 TMEM265A0A087WTH1 108 aa5.19□□□□□ -1.58
SRP54-204ENST00000553923 TMEM238LA0A1B0GVL6 79 aa5.19□□□□□ -1.58
SRP54-204ENST00000553923 CARNS1A5YM72 827 aa5.19□□□□□ -1.58
SRP54-204ENST00000553923 NEFMP07197 916 aa5.19□□□□□ -1.58
SRP54-204ENST00000553923 GSTP1P09211 210 aaKnown RBP5.19□□□□□ -1.58
SRP54-204ENST00000553923 SLFN14P0C7P3 912 aa5.19□□□□□ -1.58
SRP54-204ENST00000553923 FAM129BQ96TA1 746 aa5.19□□□□□ -1.58
SRP54-204ENST00000553923 ZC3H12CQ9C0D7 883 aaKnown RBP5.19□□□□□ -1.58
SRP54-204ENST00000553923 PIDD1Q9HB75 910 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms