RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 G3BP1Q13283 466 aaKnown RBP eCLIP10.16□□□□□ -0.78
RDH11-205ENST00000553816 DSG2Q14126 1118 aa10.16□□□□□ -0.78
RDH11-205ENST00000553816 SCARF1Q14162 830 aa10.16□□□□□ -0.78
RDH11-205ENST00000553816 CAVIN4Q5BKX8 364 aa10.16□□□□□ -0.78
RDH11-205ENST00000553816 MFSD14BQ5SR56 506 aa10.16□□□□□ -0.78
RDH11-205ENST00000553816 USP48Q86UV5 1035 aa10.16□□□□□ -0.78
RDH11-205ENST00000553816 VPS37DQ86XT2 251 aa10.16□□□□□ -0.78
RDH11-205ENST00000553816 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.16□□□□□ -0.78
RDH11-205ENST00000553816 ZC3H15Q8WU90 426 aaKnown RBP10.16□□□□□ -0.78
RDH11-205ENST00000553816 ZBED3Q96IU2 234 aaPredicted RBP10.16□□□□□ -0.78
RDH11-205ENST00000553816 MYH2Q9UKX2 1941 aa10.15□□□□□ -0.78
RDH11-205ENST00000553816 ADM5C9JUS6 153 aa10.15□□□□□ -0.78
RDH11-205ENST00000553816 SURF6O75683 361 aaKnown RBP10.15□□□□□ -0.78
RDH11-205ENST00000553816 FKBP1AP62942 108 aaKnown RBP10.15□□□□□ -0.78
RDH11-205ENST00000553816 ANGEL2Q5VTE6 544 aaKnown RBP10.15□□□□□ -0.78
RDH11-205ENST00000553816 CST9Q5W186 159 aa10.15□□□□□ -0.78
RDH11-205ENST00000553816 XAGE2Q96GT9 111 aa10.15□□□□□ -0.78
RDH11-205ENST00000553816 GGA3Q9NZ52 723 aa10.15□□□□□ -0.78
RDH11-205ENST00000553816 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.78
RDH11-205ENST00000553816 NOP58Q9Y2X3 529 aaKnown RBP10.15□□□□□ -0.78
RDH11-205ENST00000553816 CCDC102BQ68D86 513 aa10.14□□□□□ -0.79
RDH11-205ENST00000553816 PRMT6Q96LA8 375 aaPredicted RBP10.14□□□□□ -0.79
RDH11-205ENST00000553816 NEUROD6Q96NK8 337 aa10.14□□□□□ -0.79
RDH11-205ENST00000553816 TTF2Q9UNY4 1162 aaKnown RBP10.14□□□□□ -0.79
RDH11-205ENST00000553816 FRAT2O75474 233 aaPredicted RBP10.13□□□□□ -0.79
RDH11-205ENST00000553816 CFAP100Q494V2 611 aa10.13□□□□□ -0.79
RDH11-205ENST00000553816 CDC37L1Q7L3B6 337 aa10.13□□□□□ -0.79
RDH11-205ENST00000553816 KRT26Q7Z3Y9 468 aa10.13□□□□□ -0.79
RDH11-205ENST00000553816 RPAP2Q8IXW5 612 aaPredicted RBP10.13□□□□□ -0.79
RDH11-205ENST00000553816 OGFOD1Q8N543 542 aa10.13□□□□□ -0.79
RDH11-205ENST00000553816 DCPSQ96C86 337 aaKnown RBP10.13□□□□□ -0.79
RDH11-205ENST00000553816 IRX2Q9BZI1 471 aaPredicted RBP10.13□□□□□ -0.79
RDH11-205ENST00000553816 GPHNQ9NQX3 736 aaPredicted RBP10.13□□□□□ -0.79
RDH11-205ENST00000553816 HDAC9Q9UKV0 1011 aa10.13□□□□□ -0.79
RDH11-205ENST00000553816 AKAP2Q9Y2D5 859 aa10.13□□□□□ -0.79
RDH11-205ENST00000553816 TMEM88BA6NKF7 163 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 CELF2O95319 508 aaKnown RBP10.12□□□□□ -0.79
RDH11-205ENST00000553816 OS9Q13438 667 aaPredicted RBP10.12□□□□□ -0.79
RDH11-205ENST00000553816 TNNI3KQ59H18 835 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 PRAMEF18Q5VWM3 479 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 PI16Q6UXB8 463 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 HS6ST3Q8IZP7 471 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 MTMR14Q8NCE2 650 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 EAF2Q96CJ1 260 aaPredicted RBP10.12□□□□□ -0.79
RDH11-205ENST00000553816 KLRG1Q96E93 195 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 CRBNQ96SW2 442 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 DBNDD2Q9BQY9 259 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 CCDC8Q9H0W5 538 aaPredicted RBP10.12□□□□□ -0.79
RDH11-205ENST00000553816 ZNF408Q9H9D4 720 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 TLR7Q9NYK1 1049 aaKnown RBP10.12□□□□□ -0.79
RDH11-205ENST00000553816 FPGT-TNNI3KV9GXZ4 949 aa10.12□□□□□ -0.79
RDH11-205ENST00000553816 CDK5RAP2Q96SN8 1893 aa10.11□□□□□ -0.79
RDH11-205ENST00000553816 CLRN2A0PK11 232 aa10.11□□□□□ -0.79
RDH11-205ENST00000553816 PRDX5P30044 214 aa10.11□□□□□ -0.79
RDH11-205ENST00000553816 CRKP46108 304 aa10.11□□□□□ -0.79
RDH11-205ENST00000553816 RBM5P52756 815 aaKnown RBP eCLIP10.11□□□□□ -0.79
RDH11-205ENST00000553816 RASGRF1Q13972 1273 aa10.11□□□□□ -0.79
RDH11-205ENST00000553816 DLGAP5Q15398 846 aa10.11□□□□□ -0.79
RDH11-205ENST00000553816 GPR108Q9NPR9 543 aa10.11□□□□□ -0.79
RDH11-205ENST00000553816 MKRN1Q9UHC7 482 aaKnown RBP10.11□□□□□ -0.79
RDH11-205ENST00000553816 DBNLQ9UJU6 430 aaKnown RBP10.11□□□□□ -0.79
RDH11-205ENST00000553816 DENND2AQ9ULE3 1009 aa10.11□□□□□ -0.79
RDH11-205ENST00000553816 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
RDH11-205ENST00000553816 DOCK2Q92608 1830 aa10.11□□□□□ -0.79
RDH11-205ENST00000553816 PITPNM2Q9BZ72 1349 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 CEP350Q5VT06 3117 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 APBB1O00213 710 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 ARID4AP29374 1257 aaPredicted RBP10.1□□□□□ -0.79
RDH11-205ENST00000553816 MCAMP43121 646 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 MMP14P50281 582 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 DIXDC1Q155Q3 683 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 THSD4Q6ZMP0 1018 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 SULF1Q8IWU6 871 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 WDR66Q8TBY9 1149 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 RHPN1Q8TCX5 695 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 TBC1D22AQ8WUA7 517 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 CDCA5Q96FF9 252 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 TDRD3Q9H7E2 651 aaKnown RBP10.1□□□□□ -0.79
RDH11-205ENST00000553816 IL1RAPL2Q9NP60 686 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 GNL3LQ9NVN8 582 aaKnown RBP10.1□□□□□ -0.79
RDH11-205ENST00000553816 HMG20BQ9P0W2 317 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 SERPINA10Q9UK55 444 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 MAST2Q6P0Q8 1798 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 CNTNAP1P78357 1384 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 OTOFQ9HC10 1997 aa10.1□□□□□ -0.79
RDH11-205ENST00000553816 SALL1Q9NSC2 1324 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 THSD7BQ9C0I4 1608 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 RASSF10A6NK89 507 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 SEMA3EO15041 775 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 RGS20O76081 388 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 GORABQ5T7V8 394 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 IFFO2Q5TF58 517 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 TBC1D9Q6ZT07 1266 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 MOB2Q70IA6 237 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 ZNF384Q8TF68 577 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 CHMP4BQ9H444 224 aaKnown RBP10.09□□□□□ -0.79
RDH11-205ENST00000553816 SNRKQ9NRH2 765 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 FZD1Q9UP38 647 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 TLL2Q9Y6L7 1015 aa10.09□□□□□ -0.79
RDH11-205ENST00000553816 SSC5DA1L4H1 1573 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms