RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 SNX14Q9Y5W7 946 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 MROH7-TTC4A0A0A0MT08 1334 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 LTBP3Q9NS15 1303 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 LAMB1P07942 1786 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
ABCD4-219ENST00000553745 FSD2A1L4K1 749 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 USP17L3A6NCW0 530 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 USP17L4A6NCW7 530 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 F8W031 263 aaPredicted RBP16.74■□□□□ 0.27
ABCD4-219ENST00000553745 BAG4O95429 457 aaKnown RBP16.74■□□□□ 0.27
ABCD4-219ENST00000553745 USP17L1Q7RTZ2 530 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 NIM1KQ8IY84 436 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 FOCADQ5VW36 1801 aa16.74■□□□□ 0.27
ABCD4-219ENST00000553745 PRKAB2O43741 272 aa16.73■□□□□ 0.27
ABCD4-219ENST00000553745 SBF1O95248 1867 aa16.73■□□□□ 0.27
ABCD4-219ENST00000553745 GSTO1P78417 241 aa16.73■□□□□ 0.27
ABCD4-219ENST00000553745 KCNB2Q92953 911 aa16.73■□□□□ 0.27
ABCD4-219ENST00000553745 EPB41L4AQ9HCS5 686 aaPredicted RBP16.73■□□□□ 0.27
ABCD4-219ENST00000553745 SUGT1Q9Y2Z0 365 aa16.73■□□□□ 0.27
ABCD4-219ENST00000553745 TAF6LQ9Y6J9 622 aa16.73■□□□□ 0.27
ABCD4-219ENST00000553745 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
ABCD4-219ENST00000553745 CYP21A2P08686 494 aa16.72■□□□□ 0.27
ABCD4-219ENST00000553745 FKBP1AP62942 108 aaKnown RBP16.72■□□□□ 0.27
ABCD4-219ENST00000553745 SKOR2Q2VWA4 1001 aaPredicted RBP16.72■□□□□ 0.27
ABCD4-219ENST00000553745 ZDHHC9Q9Y397 364 aa16.72■□□□□ 0.27
ABCD4-219ENST00000553745 SLC4A4Q9Y6R1 1079 aa16.72■□□□□ 0.27
ABCD4-219ENST00000553745 GNAT2P19087 354 aa16.72■□□□□ 0.27
ABCD4-219ENST00000553745 PRELPP51888 382 aa16.72■□□□□ 0.27
ABCD4-219ENST00000553745 TTF2Q9UNY4 1162 aaKnown RBP16.72■□□□□ 0.27
ABCD4-219ENST00000553745 TIAM2Q8IVF5 1701 aa16.71■□□□□ 0.27
ABCD4-219ENST00000553745 GAKO14976 1311 aa16.71■□□□□ 0.27
ABCD4-219ENST00000553745 DDX60LQ5H9U9 1706 aaKnown RBP16.71■□□□□ 0.27
ABCD4-219ENST00000553745 GSG1L2A8MUP6 293 aa16.71■□□□□ 0.27
ABCD4-219ENST00000553745 RAD17O75943 681 aa16.71■□□□□ 0.27
ABCD4-219ENST00000553745 FGAP02671 866 aa16.71■□□□□ 0.27
ABCD4-219ENST00000553745 APPP05067 770 aa16.71■□□□□ 0.27
ABCD4-219ENST00000553745 LDHCP07864 332 aa16.71■□□□□ 0.27
ABCD4-219ENST00000553745 PKP1Q13835 747 aa16.71■□□□□ 0.27
ABCD4-219ENST00000553745 L1TD1Q5T7N2 865 aaKnown RBP16.71■□□□□ 0.27
ABCD4-219ENST00000553745 RNF20Q5VTR2 975 aa16.71■□□□□ 0.27
ABCD4-219ENST00000553745 SDR42E1Q8WUS8 393 aa16.71■□□□□ 0.27
ABCD4-219ENST00000553745 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
ABCD4-219ENST00000553745 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
ABCD4-219ENST00000553745 BTDP43251 543 aa16.7■□□□□ 0.26
ABCD4-219ENST00000553745 SCNN1DP51172 638 aa16.7■□□□□ 0.26
ABCD4-219ENST00000553745 ADCK5Q3MIX3 580 aa16.7■□□□□ 0.26
ABCD4-219ENST00000553745 KIAA0825Q8IV33 1275 aa16.7■□□□□ 0.26
ABCD4-219ENST00000553745 INTS4Q96HW7 963 aaKnown RBP16.7■□□□□ 0.26
ABCD4-219ENST00000553745 BRPF3Q9ULD4 1205 aa16.7■□□□□ 0.26
ABCD4-219ENST00000553745 ZNRF3Q9ULT6 936 aa16.7■□□□□ 0.26
ABCD4-219ENST00000553745 DAGLAQ9Y4D2 1042 aa16.7■□□□□ 0.26
ABCD4-219ENST00000553745 ZMYM6O95789 1325 aa16.7■□□□□ 0.26
ABCD4-219ENST00000553745 RPAP1Q9BWH6 1393 aaPredicted RBP16.7■□□□□ 0.26
ABCD4-219ENST00000553745 PSMD14O00487 310 aa16.69■□□□□ 0.26
ABCD4-219ENST00000553745 SLF2Q8IX21 1173 aa16.69■□□□□ 0.26
ABCD4-219ENST00000553745 IFNL3Q8IZI9 196 aa16.69■□□□□ 0.26
ABCD4-219ENST00000553745 GZF1Q9H116 711 aaPredicted RBP16.69■□□□□ 0.26
ABCD4-219ENST00000553745 HAND2P61296 217 aa16.69■□□□□ 0.26
ABCD4-219ENST00000553745 SH3RF3Q8TEJ3 882 aaPredicted RBP16.69■□□□□ 0.26
ABCD4-219ENST00000553745 JDP2Q8WYK2 163 aa16.69■□□□□ 0.26
ABCD4-219ENST00000553745 FAM163AQ96GL9 167 aaPredicted RBP16.69■□□□□ 0.26
ABCD4-219ENST00000553745 TTC14Q96N46 770 aa16.69■□□□□ 0.26
ABCD4-219ENST00000553745 NOL10Q9BSC4 688 aaKnown RBP16.69■□□□□ 0.26
ABCD4-219ENST00000553745 NAPBQ9H115 298 aa16.69■□□□□ 0.26
ABCD4-219ENST00000553745 CTNNA3Q9UI47 895 aa16.69■□□□□ 0.26
ABCD4-219ENST00000553745 GPR75-ASB3A0A0A6YYF3 556 aa16.68■□□□□ 0.26
ABCD4-219ENST00000553745 BAG3O95817 575 aa16.68■□□□□ 0.26
ABCD4-219ENST00000553745 YBX3P16989 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
ABCD4-219ENST00000553745 ALX1Q15699 326 aa16.68■□□□□ 0.26
ABCD4-219ENST00000553745 RSBN1LQ6PCB5 846 aaPredicted RBP16.68■□□□□ 0.26
ABCD4-219ENST00000553745 JAKMIP1Q96N16 626 aaKnown RBP16.68■□□□□ 0.26
ABCD4-219ENST00000553745 UPF3BQ9BZI7 483 aaKnown RBP16.68■□□□□ 0.26
ABCD4-219ENST00000553745 CRNKL1Q9BZJ0 848 aaKnown RBP16.68■□□□□ 0.26
ABCD4-219ENST00000553745 VIL1P09327 827 aaKnown RBP16.67■□□□□ 0.26
ABCD4-219ENST00000553745 CASTP20810 708 aaKnown RBP16.67■□□□□ 0.26
ABCD4-219ENST00000553745 TDO2P48775 406 aa16.67■□□□□ 0.26
ABCD4-219ENST00000553745 PPP4CP60510 307 aa16.67■□□□□ 0.26
ABCD4-219ENST00000553745 IMMTQ16891 758 aaKnown RBP16.67■□□□□ 0.26
ABCD4-219ENST00000553745 TSGA10IPQ3SY00 556 aa16.67■□□□□ 0.26
ABCD4-219ENST00000553745 ARHGAP27Q6ZUM4 889 aa16.67■□□□□ 0.26
ABCD4-219ENST00000553745 STOX1Q6ZVD7 989 aa16.67■□□□□ 0.26
ABCD4-219ENST00000553745 NACAP1Q9BZK3 213 aa16.67■□□□□ 0.26
ABCD4-219ENST00000553745 MYO3BQ8WXR4 1341 aa16.67■□□□□ 0.26
ABCD4-219ENST00000553745 MYH1P12882 1939 aa16.67■□□□□ 0.26
ABCD4-219ENST00000553745 GOLGA6L3A6NEY3 463 aa16.66■□□□□ 0.26
ABCD4-219ENST00000553745 GOLGA6L22H0YM25 854 aa16.66■□□□□ 0.26
ABCD4-219ENST00000553745 CRKP46108 304 aa16.66■□□□□ 0.26
ABCD4-219ENST00000553745 CXCL9Q07325 125 aa16.66■□□□□ 0.26
ABCD4-219ENST00000553745 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
ABCD4-219ENST00000553745 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
ABCD4-219ENST00000553745 NBPF3Q9H094 633 aa16.66■□□□□ 0.26
ABCD4-219ENST00000553745 ZNF213O14771 459 aa16.66■□□□□ 0.26
ABCD4-219ENST00000553745 CPA1P15085 419 aa16.66■□□□□ 0.26
ABCD4-219ENST00000553745 RHBDL3P58872 404 aa16.66■□□□□ 0.26
ABCD4-219ENST00000553745 HHIPL2Q6UWX4 724 aa16.66■□□□□ 0.26
ABCD4-219ENST00000553745 ZBTB12Q9Y330 459 aaPredicted RBP16.66■□□□□ 0.26
ABCD4-219ENST00000553745 KRT32Q14532 448 aa16.65■□□□□ 0.26
ABCD4-219ENST00000553745 CIAPIN1Q6FI81 312 aa16.65■□□□□ 0.26
ABCD4-219ENST00000553745 CERS3Q8IU89 383 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms