RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 SELPP16109 830 aa5.67□□□□□ -1.5
TDP1-207ENST00000553617 LMNB1P20700 586 aa5.67□□□□□ -1.5
TDP1-207ENST00000553617 ADH7P40394 386 aa5.67□□□□□ -1.5
TDP1-207ENST00000553617 RPL6Q02878 288 aaKnown RBP5.67□□□□□ -1.5
TDP1-207ENST00000553617 PTPN11Q06124 597 aaPredicted RBP5.67□□□□□ -1.5
TDP1-207ENST00000553617 TBC1D8BQ0IIM8 1120 aa5.67□□□□□ -1.5
TDP1-207ENST00000553617 FOXR1Q6PIV2 292 aa5.67□□□□□ -1.5
TDP1-207ENST00000553617 VWA5B2Q8N398 1253 aa5.67□□□□□ -1.5
TDP1-207ENST00000553617 FERD3LQ96RJ6 166 aa5.67□□□□□ -1.5
TDP1-207ENST00000553617 EMILIN2Q9BXX0 1053 aa5.67□□□□□ -1.5
TDP1-207ENST00000553617 SMG9Q9H0W8 520 aaKnown RBP5.67□□□□□ -1.5
TDP1-207ENST00000553617 POLR3KQ9Y2Y1 108 aaPredicted RBP5.67□□□□□ -1.5
TDP1-207ENST00000553617 TRIM37O94972 964 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 ARAFP10398 606 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 IMPDH2P12268 514 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 BMP4P12644 408 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 EPHA1P21709 976 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 MCM4P33991 863 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 CASP7P55210 303 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 DDR2Q16832 855 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 SV2AQ7L0J3 742 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 LSRQ86X29 649 aaPredicted RBP5.66□□□□□ -1.5
TDP1-207ENST00000553617 GPATCH3Q96I76 525 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 SOX17Q9H6I2 414 aaPredicted RBP5.66□□□□□ -1.5
TDP1-207ENST00000553617 ACTR10Q9NZ32 417 aa5.66□□□□□ -1.5
TDP1-207ENST00000553617 R3HCC1Q9Y3T6 440 aaKnown RBP5.66□□□□□ -1.5
TDP1-207ENST00000553617 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 SOX1O00570 391 aaPredicted RBP5.65□□□□□ -1.5
TDP1-207ENST00000553617 BPNT1O95861 308 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 AP3B2Q13367 1082 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 RASGRF1Q13972 1273 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 GAS6Q14393 721 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 PLEKHG4Q58EX7 1191 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 ELMSAN1Q6PJG2 1045 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 MPRIPQ6WCQ1 1025 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 GK5Q6ZS86 529 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 FCHSD1Q86WN1 690 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 MICALL1Q8N3F8 863 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 NRSN2Q9GZP1 204 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 LACRTQ9GZZ8 138 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 TNKS2Q9H2K2 1166 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 CBX8Q9HC52 389 aa5.65□□□□□ -1.5
TDP1-207ENST00000553617 SH2B1Q9NRF2 756 aaPredicted RBP5.65□□□□□ -1.5
TDP1-207ENST00000553617 MEIS3P2A8K0S8 358 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 H3BRJ5 948 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 GSTP1P09211 210 aaKnown RBP5.64□□□□□ -1.51
TDP1-207ENST00000553617 ADH6P28332 368 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 CDC27P30260 824 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 IKBKEQ14164 716 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 GRIK5Q16478 980 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.64□□□□□ -1.51
TDP1-207ENST00000553617 CACTIN-AS1Q8N1I8 211 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 GPR161Q8N6U8 529 aaKnown RBP5.64□□□□□ -1.51
TDP1-207ENST00000553617 C19orf47Q8N9M1 422 aaKnown RBP5.64□□□□□ -1.51
TDP1-207ENST00000553617 CRBNQ96SW2 442 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 KANSL2Q9H9L4 492 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 MAPK8IP1Q9UQF2 711 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 PCDHB14Q9Y5E9 798 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 PRR36Q9H6K5 1346 aa5.64□□□□□ -1.51
TDP1-207ENST00000553617 GFRA2O00451 464 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 PDPK1O15530 556 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 MX2P20592 715 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 CDK8P49336 464 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 FBXW10Q5XX13 1052 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 HGSNATQ68CP4 663 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 DIEXFQ68CQ4 756 aaKnown RBP5.63□□□□□ -1.51
TDP1-207ENST00000553617 PSAPL1Q6NUJ1 521 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 LILRB2Q8N423 598 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 JMYQ8N9B5 988 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 DDX54Q8TDD1 881 aaKnown RBP5.63□□□□□ -1.51
TDP1-207ENST00000553617 MICAL1Q8TDZ2 1067 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 SH3TC2Q8TF17 1288 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 KCNB2Q92953 911 aa5.63□□□□□ -1.51
TDP1-207ENST00000553617 ELOA3CA0A087WX78 387 aaPredicted RBP5.62□□□□□ -1.51
TDP1-207ENST00000553617 ELOA3DA6NLF2 546 aaPredicted RBP5.62□□□□□ -1.51
TDP1-207ENST00000553617 BAG6P46379 1132 aa5.62□□□□□ -1.51
TDP1-207ENST00000553617 CABP4P57796 275 aa5.62□□□□□ -1.51
TDP1-207ENST00000553617 ELOA3BQ3SY89 546 aa5.62□□□□□ -1.51
TDP1-207ENST00000553617 MAP1SQ66K74 1059 aaPredicted RBP5.62□□□□□ -1.51
TDP1-207ENST00000553617 ELOA3Q8NG57 546 aa5.62□□□□□ -1.51
TDP1-207ENST00000553617 GPBAR1Q8TDU6 330 aa5.62□□□□□ -1.51
TDP1-207ENST00000553617 DNAJC7Q99615 494 aa5.62□□□□□ -1.51
TDP1-207ENST00000553617 BRINP2Q9C0B6 783 aa5.62□□□□□ -1.51
TDP1-207ENST00000553617 KRT82Q9NSB4 513 aa5.62□□□□□ -1.51
TDP1-207ENST00000553617 CCDC85CA6NKD9 419 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 TM4SF5O14894 197 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 GRIN3BO60391 1043 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 CLSTN1O94985 981 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 GJB6O95452 261 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 MAP2K3P46734 347 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 FXNQ16595 210 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 PTPROQ16827 1216 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 GDF6Q6KF10 455 aaPredicted RBP5.61□□□□□ -1.51
TDP1-207ENST00000553617 RUFY4Q6ZNE9 571 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 C20orf204Q6ZNR8 217 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 TAB3Q8N5C8 712 aaPredicted RBP5.61□□□□□ -1.51
TDP1-207ENST00000553617 WNT8BQ93098 351 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 ST7Q9NRC1 585 aa5.61□□□□□ -1.51
TDP1-207ENST00000553617 MBIPQ9NS73 344 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms