RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 PRMT6Q96LA8 375 aaPredicted RBP23.27■■□□□ 1.32
PSEN1-207ENST00000553599 RAD50Q92878 1312 aa23.27■■□□□ 1.32
PSEN1-207ENST00000553599 MFAP1P55081 439 aaKnown RBP23.26■■□□□ 1.31
PSEN1-207ENST00000553599 MCMDC2Q4G0Z9 681 aa23.26■■□□□ 1.31
PSEN1-207ENST00000553599 ZC3H15Q8WU90 426 aaKnown RBP23.26■■□□□ 1.31
PSEN1-207ENST00000553599 OSBP2Q969R2 916 aa23.26■■□□□ 1.31
PSEN1-207ENST00000553599 AIDAQ96BJ3 306 aa23.26■■□□□ 1.31
PSEN1-207ENST00000553599 RIOK1Q9BRS2 568 aaKnown RBP23.26■■□□□ 1.31
PSEN1-207ENST00000553599 AATFQ9NY61 560 aaKnown RBP eCLIP23.26■■□□□ 1.31
PSEN1-207ENST00000553599 NMIQ13287 307 aaPredicted RBP23.25■■□□□ 1.31
PSEN1-207ENST00000553599 RBM26Q5T8P6 1007 aaKnown RBP23.25■■□□□ 1.31
PSEN1-207ENST00000553599 TRPM4Q8TD43 1214 aa23.25■■□□□ 1.31
PSEN1-207ENST00000553599 PUS7LQ9H0K6 701 aaKnown RBP23.25■■□□□ 1.31
PSEN1-207ENST00000553599 RRAGCQ9HB90 399 aa23.25■■□□□ 1.31
PSEN1-207ENST00000553599 TMOD2Q9NZR1 351 aa23.25■■□□□ 1.31
PSEN1-207ENST00000553599 ADAMTSL1Q8N6G6 1762 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 EGFRP00533 1210 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 CHGBP05060 677 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 GNAT2P19087 354 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 NBPF9Q3BBW0 867 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 SPDYE2Q495Y8 402 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 FKBP1CQ5VVH2 108 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 CDC42EP5Q6NZY7 148 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 CWC27Q6UX04 472 aaKnown RBP23.24■■□□□ 1.31
PSEN1-207ENST00000553599 MIGA1Q8NAN2 632 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 FAM227BQ96M60 508 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 USP40Q9NVE5 1235 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 ECM29Q5VYK3 1845 aa23.24■■□□□ 1.31
PSEN1-207ENST00000553599 A0A0D9SFI3 127 aa23.23■■□□□ 1.31
PSEN1-207ENST00000553599 NPM3O75607 178 aaKnown RBP23.23■■□□□ 1.31
PSEN1-207ENST00000553599 MBD4O95243 580 aa23.23■■□□□ 1.31
PSEN1-207ENST00000553599 YY1P25490 414 aa23.23■■□□□ 1.31
PSEN1-207ENST00000553599 RHBDL3P58872 404 aa23.23■■□□□ 1.31
PSEN1-207ENST00000553599 SLFNL1Q499Z3 407 aa23.23■■□□□ 1.31
PSEN1-207ENST00000553599 CRNKL1Q9BZJ0 848 aaKnown RBP23.23■■□□□ 1.31
PSEN1-207ENST00000553599 GPBP1L1Q9HC44 474 aaPredicted RBP23.23■■□□□ 1.31
PSEN1-207ENST00000553599 PCDHAC2Q9Y5I4 1007 aa23.23■■□□□ 1.31
PSEN1-207ENST00000553599 PITPNM2Q9BZ72 1349 aa23.23■■□□□ 1.31
PSEN1-207ENST00000553599 GPAA1O43292 621 aa23.22■■□□□ 1.31
PSEN1-207ENST00000553599 HIRAP54198 1017 aaPredicted RBP23.22■■□□□ 1.31
PSEN1-207ENST00000553599 ZNF526Q8TF50 670 aaPredicted RBP23.22■■□□□ 1.31
PSEN1-207ENST00000553599 STRBPQ96SI9 672 aaKnown RBP23.22■■□□□ 1.31
PSEN1-207ENST00000553599 IDI2Q9BXS1 227 aa23.22■■□□□ 1.31
PSEN1-207ENST00000553599 TDRD3Q9H7E2 651 aaKnown RBP23.22■■□□□ 1.31
PSEN1-207ENST00000553599 NMRK2Q9NPI5 230 aa23.22■■□□□ 1.31
PSEN1-207ENST00000553599 ZNF70Q9UC06 446 aaPredicted RBP23.22■■□□□ 1.31
PSEN1-207ENST00000553599 PGAP2Q9UHJ9 254 aa23.22■■□□□ 1.31
PSEN1-207ENST00000553599 RPAP1Q9BWH6 1393 aaPredicted RBP23.22■■□□□ 1.31
PSEN1-207ENST00000553599 M0R2C6 588 aa23.21■■□□□ 1.31
PSEN1-207ENST00000553599 EIF5BO60841 1220 aaKnown RBP23.21■■□□□ 1.31
PSEN1-207ENST00000553599 DYNLL1P63167 89 aaKnown RBP23.21■■□□□ 1.31
PSEN1-207ENST00000553599 TNFAIP1Q13829 316 aa23.21■■□□□ 1.31
PSEN1-207ENST00000553599 TEX11Q8IYF3 940 aa23.21■■□□□ 1.31
PSEN1-207ENST00000553599 LCORLQ8N3X6 602 aa23.21■■□□□ 1.31
PSEN1-207ENST00000553599 SH3RF3Q8TEJ3 882 aaPredicted RBP23.21■■□□□ 1.31
PSEN1-207ENST00000553599 SEC62Q99442 399 aaKnown RBP23.21■■□□□ 1.31
PSEN1-207ENST00000553599 CCDC171Q6TFL3 1326 aa23.2■■□□□ 1.3
PSEN1-207ENST00000553599 APOBEC3FQ8IUX4 373 aaKnown RBP23.2■■□□□ 1.3
PSEN1-207ENST00000553599 ARMT1Q9H993 441 aa23.2■■□□□ 1.3
PSEN1-207ENST00000553599 SGSM2O43147 1006 aa23.19■■□□□ 1.3
PSEN1-207ENST00000553599 GIMAP6Q6P9H5 292 aa23.19■■□□□ 1.3
PSEN1-207ENST00000553599 ESYT1Q9BSJ8 1104 aa23.19■■□□□ 1.3
PSEN1-207ENST00000553599 ATP8A2Q9NTI2 1148 aa23.19■■□□□ 1.3
PSEN1-207ENST00000553599 ENTPD3O75355 529 aa23.18■■□□□ 1.3
PSEN1-207ENST00000553599 WDHD1O75717 1129 aaPredicted RBP23.18■■□□□ 1.3
PSEN1-207ENST00000553599 TNNI2P48788 182 aa23.18■■□□□ 1.3
PSEN1-207ENST00000553599 EAPPQ56P03 285 aaPredicted RBP23.18■■□□□ 1.3
PSEN1-207ENST00000553599 FAM83AQ86UY5 434 aa23.18■■□□□ 1.3
PSEN1-207ENST00000553599 LDHDQ86WU2 507 aa23.18■■□□□ 1.3
PSEN1-207ENST00000553599 DCPSQ96C86 337 aaKnown RBP23.18■■□□□ 1.3
PSEN1-207ENST00000553599 DDRGK1Q96HY6 314 aa23.18■■□□□ 1.3
PSEN1-207ENST00000553599 CLRN2A0PK11 232 aa23.17■■□□□ 1.3
PSEN1-207ENST00000553599 ANGEL2Q5VTE6 544 aaKnown RBP23.17■■□□□ 1.3
PSEN1-207ENST00000553599 VEZTQ9HBM0 779 aa23.17■■□□□ 1.3
PSEN1-207ENST00000553599 GGA3Q9NZ52 723 aa23.17■■□□□ 1.3
PSEN1-207ENST00000553599 SLC4A4Q9Y6R1 1079 aa23.17■■□□□ 1.3
PSEN1-207ENST00000553599 PATL2C9JE40 543 aaKnown RBP23.16■■□□□ 1.3
PSEN1-207ENST00000553599 USP5P45974 858 aa23.16■■□□□ 1.3
PSEN1-207ENST00000553599 ZNF589Q86UQ0 364 aaPredicted RBP23.16■■□□□ 1.3
PSEN1-207ENST00000553599 NACAP1Q9BZK3 213 aa23.16■■□□□ 1.3
PSEN1-207ENST00000553599 PPP2R3BQ9Y5P8 575 aa23.16■■□□□ 1.3
PSEN1-207ENST00000553599 FOCADQ5VW36 1801 aa23.15■■□□□ 1.3
PSEN1-207ENST00000553599 CCDC129Q6ZRS4 1044 aa23.15■■□□□ 1.3
PSEN1-207ENST00000553599 TGFBRAP1Q8WUH2 860 aa23.15■■□□□ 1.3
PSEN1-207ENST00000553599 COL2A1P02458 1487 aaPredicted RBP23.15■■□□□ 1.3
PSEN1-207ENST00000553599 ASTN2O75129 1339 aaPredicted RBP23.14■■□□□ 1.3
PSEN1-207ENST00000553599 FLT1P17948 1338 aa23.14■■□□□ 1.3
PSEN1-207ENST00000553599 NFIAQ12857 509 aa23.14■■□□□ 1.29
PSEN1-207ENST00000553599 KIAA1211Q6ZU35 1233 aa23.14■■□□□ 1.29
PSEN1-207ENST00000553599 SULF1Q8IWU6 871 aa23.14■■□□□ 1.29
PSEN1-207ENST00000553599 FAM151AQ8WW52 585 aa23.14■■□□□ 1.29
PSEN1-207ENST00000553599 DSCC1Q9BVC3 393 aa23.14■■□□□ 1.29
PSEN1-207ENST00000553599 FAM198AQ9UFP1 575 aa23.14■■□□□ 1.29
PSEN1-207ENST00000553599 MKRN1Q9UHC7 482 aaKnown RBP23.14■■□□□ 1.29
PSEN1-207ENST00000553599 CLEC11AQ9Y240 323 aa23.14■■□□□ 1.29
PSEN1-207ENST00000553599 CDK5RAP2Q96SN8 1893 aa23.13■■□□□ 1.29
PSEN1-207ENST00000553599 ZMYM6O95789 1325 aa23.13■■□□□ 1.29
PSEN1-207ENST00000553599 GSG1L2A8MUP6 293 aa23.13■■□□□ 1.29
PSEN1-207ENST00000553599 TCP10L2B9ZVM9 353 aa23.13■■□□□ 1.29
PSEN1-207ENST00000553599 HSPD1P10809 573 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms