RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 GOLIM4O00461 696 aa8.71□□□□□ -1.02
ATXN3-221ENST00000553498 SLC27A2O14975 620 aa8.71□□□□□ -1.02
ATXN3-221ENST00000553498 KDM4AO75164 1064 aa8.71□□□□□ -1.02
ATXN3-221ENST00000553498 SLC5A1P13866 664 aa8.71□□□□□ -1.02
ATXN3-221ENST00000553498 FGFR2P21802 821 aa8.71□□□□□ -1.02
ATXN3-221ENST00000553498 ARID4AP29374 1257 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-221ENST00000553498 PTH1RQ03431 593 aa8.71□□□□□ -1.02
ATXN3-221ENST00000553498 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-221ENST00000553498 SLC27A3Q5K4L6 730 aa8.71□□□□□ -1.02
ATXN3-221ENST00000553498 BLOC1S2Q6QNY1 142 aa8.71□□□□□ -1.02
ATXN3-221ENST00000553498 DDX46Q7L014 1031 aaKnown RBP8.71□□□□□ -1.02
ATXN3-221ENST00000553498 TNPO1Q92973 898 aaKnown RBP8.71□□□□□ -1.02
ATXN3-221ENST00000553498 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.71□□□□□ -1.02
ATXN3-221ENST00000553498 PDRG1Q9NUG6 133 aa8.71□□□□□ -1.02
ATXN3-221ENST00000553498 CCNL1Q9UK58 526 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-221ENST00000553498 ISY1Q9ULR0 285 aaKnown RBP8.71□□□□□ -1.02
ATXN3-221ENST00000553498 LRP5O75197 1615 aa8.71□□□□□ -1.02
ATXN3-221ENST00000553498 ITGB4P16144 1822 aa8.7□□□□□ -1.02
ATXN3-221ENST00000553498 ADH1BP00325 375 aa8.7□□□□□ -1.02
ATXN3-221ENST00000553498 CASTP20810 708 aaKnown RBP8.7□□□□□ -1.02
ATXN3-221ENST00000553498 PDE4DQ08499 809 aa8.7□□□□□ -1.02
ATXN3-221ENST00000553498 UBE3CQ15386 1083 aa8.7□□□□□ -1.02
ATXN3-221ENST00000553498 TPTE2Q6XPS3 522 aa8.7□□□□□ -1.02
ATXN3-221ENST00000553498 FAM196AQ6ZSG2 479 aa8.7□□□□□ -1.02
ATXN3-221ENST00000553498 SEPT12Q8IYM1 358 aa8.7□□□□□ -1.02
ATXN3-221ENST00000553498 APPBP2Q92624 585 aa8.7□□□□□ -1.02
ATXN3-221ENST00000553498 JAKMIP1Q96N16 626 aaKnown RBP8.7□□□□□ -1.02
ATXN3-221ENST00000553498 SETDB2Q96T68 719 aa8.7□□□□□ -1.02
ATXN3-221ENST00000553498 UPF3BQ9BZI7 483 aaKnown RBP8.7□□□□□ -1.02
ATXN3-221ENST00000553498 SPEF2Q9C093 1822 aa8.7□□□□□ -1.02
ATXN3-221ENST00000553498 AFDNP55196 1824 aaKnown RBP8.69□□□□□ -1.02
ATXN3-221ENST00000553498 RPS6KB1P23443 525 aa8.69□□□□□ -1.02
ATXN3-221ENST00000553498 AK2P54819 239 aa8.69□□□□□ -1.02
ATXN3-221ENST00000553498 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
ATXN3-221ENST00000553498 SYNE4Q8N205 404 aa8.69□□□□□ -1.02
ATXN3-221ENST00000553498 FBXL16Q8N461 479 aa8.69□□□□□ -1.02
ATXN3-221ENST00000553498 HLA-CQ95604 372 aa8.69□□□□□ -1.02
ATXN3-221ENST00000553498 BSDC1Q9NW68 430 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-221ENST00000553498 ATP6V1DQ9Y5K8 247 aa8.69□□□□□ -1.02
ATXN3-221ENST00000553498 WDR33Q9C0J8 1336 aaKnown RBP8.69□□□□□ -1.02
ATXN3-221ENST00000553498 NHSQ6T4R5 1651 aa8.69□□□□□ -1.02
ATXN3-221ENST00000553498 HOXA2O43364 376 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 BRD1O95696 1058 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 HCLS1P14317 486 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-221ENST00000553498 PDCP20941 246 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-221ENST00000553498 USP46P62068 366 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 FKBP4Q02790 459 aaKnown RBP eCLIP8.68□□□□□ -1.02
ATXN3-221ENST00000553498 UBE4AQ14139 1066 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 TRAPPC3LQ5T215 181 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 CCDC102BQ68D86 513 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 ZNF589Q86UQ0 364 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-221ENST00000553498 ANKRD18AQ8IVF6 992 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 NLRP3Q96P20 1036 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 NEK1Q96PY6 1258 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 SPSB2Q99619 263 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 ANKRD2Q9GZV1 360 aa8.68□□□□□ -1.02
ATXN3-221ENST00000553498 QTRT2Q9H974 415 aaKnown RBP8.68□□□□□ -1.02
ATXN3-221ENST00000553498 GNL3LQ9NVN8 582 aaKnown RBP8.68□□□□□ -1.02
ATXN3-221ENST00000553498 PDS5AQ29RF7 1337 aaKnown RBP8.68□□□□□ -1.02
ATXN3-221ENST00000553498 RNF223E7ERA6 249 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 TRAK2O60296 914 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 MAST3O60307 1309 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 BAG4O95429 457 aaKnown RBP8.67□□□□□ -1.02
ATXN3-221ENST00000553498 ZMYM6O95789 1325 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 S1PR4O95977 384 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 ADORA1P30542 326 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 RFC4P35249 363 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 ZAP70P43403 619 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 MAP3K12Q12852 859 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 ZNF772Q68DY9 489 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-221ENST00000553498 FAM160A2Q8N612 972 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-221ENST00000553498 CARMIL3Q8ND23 1372 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 WDR19Q8NEZ3 1342 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 EMID1Q96A84 441 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-221ENST00000553498 EDC3Q96F86 508 aaKnown RBP8.67□□□□□ -1.02
ATXN3-221ENST00000553498 CCDC85AQ96PX6 553 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-221ENST00000553498 SMC3Q9UQE7 1217 aa8.67□□□□□ -1.02
ATXN3-221ENST00000553498 ANKRD36CQ5JPF3 1778 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 CYP21A2P08686 494 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 HSPD1P10809 573 aaKnown RBP8.66□□□□□ -1.02
ATXN3-221ENST00000553498 GNAT2P19087 354 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 ADD2P35612 726 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 DEKP35659 375 aaKnown RBP8.66□□□□□ -1.02
ATXN3-221ENST00000553498 MCAMP43121 646 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 IMMTQ16891 758 aaKnown RBP8.66□□□□□ -1.02
ATXN3-221ENST00000553498 CSPP1Q1MSJ5 1256 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 WASHC4Q2M389 1173 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 ADCK5Q3MIX3 580 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 ERFEQ4G0M1 354 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 CAVIN4Q5BKX8 364 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 RNF19BQ6ZMZ0 732 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 DHX32Q7L7V1 743 aaKnown RBP8.66□□□□□ -1.02
ATXN3-221ENST00000553498 NBPF5PQ86XG9 351 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-221ENST00000553498 ZGPATQ8N5A5 531 aaKnown RBP8.66□□□□□ -1.02
ATXN3-221ENST00000553498 SPATA5Q8NB90 893 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 SPIRE2Q8WWL2 714 aa8.66□□□□□ -1.02
ATXN3-221ENST00000553498 KIF3AQ9Y496 699 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms