RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CCL15-CCL14A0A0B4J2E2 113 aa12.39□□□□□ -0.43
ACTN1-208ENST00000553370 E9PSI1 815 aa12.39□□□□□ -0.43
ACTN1-208ENST00000553370 SLC5A1P13866 664 aa12.39□□□□□ -0.43
ACTN1-208ENST00000553370 GTF2A2P52657 109 aa12.39□□□□□ -0.43
ACTN1-208ENST00000553370 CACNB3P54284 484 aa12.39□□□□□ -0.43
ACTN1-208ENST00000553370 CCL15Q16663 113 aa12.39□□□□□ -0.43
ACTN1-208ENST00000553370 LRRC24Q50LG9 513 aa12.39□□□□□ -0.43
ACTN1-208ENST00000553370 OTOP1Q7RTM1 612 aa12.39□□□□□ -0.43
ACTN1-208ENST00000553370 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
ACTN1-208ENST00000553370 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
ACTN1-208ENST00000553370 PDE8BO95263 885 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 SP3Q02447 781 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 VGLL4Q14135 290 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 DCAF15Q66K64 600 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 INTS3Q68E01 1043 aaKnown RBP12.38□□□□□ -0.43
ACTN1-208ENST00000553370 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
ACTN1-208ENST00000553370 KLHDC4Q8TBB5 520 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 WRNIP1Q96S55 665 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 ZFYVE28Q9HCC9 887 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 RIPOR2Q9Y4F9 1068 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 ZSWIM8A7E2V4 1837 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 MGAMO43451 1857 aa12.38□□□□□ -0.43
ACTN1-208ENST00000553370 UTYO14607 1347 aa12.37□□□□□ -0.43
ACTN1-208ENST00000553370 GJA5P36382 358 aa12.37□□□□□ -0.43
ACTN1-208ENST00000553370 PSEN1P49768 467 aa12.37□□□□□ -0.43
ACTN1-208ENST00000553370 BCAMP50895 628 aa12.37□□□□□ -0.43
ACTN1-208ENST00000553370 HDLBPQ00341 1268 aaKnown RBP12.37□□□□□ -0.43
ACTN1-208ENST00000553370 KIF22Q14807 665 aa12.37□□□□□ -0.43
ACTN1-208ENST00000553370 RABL6Q3YEC7 729 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-208ENST00000553370 FBXO33Q7Z6M2 555 aa12.37□□□□□ -0.43
ACTN1-208ENST00000553370 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
ACTN1-208ENST00000553370 KAZALD1Q96I82 304 aa12.37□□□□□ -0.43
ACTN1-208ENST00000553370 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
ACTN1-208ENST00000553370 GNL3LQ9NVN8 582 aaKnown RBP12.37□□□□□ -0.43
ACTN1-208ENST00000553370 UBTFL1P0CB47 393 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-208ENST00000553370 CETPP11597 493 aa12.36□□□□□ -0.43
ACTN1-208ENST00000553370 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
ACTN1-208ENST00000553370 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
ACTN1-208ENST00000553370 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
ACTN1-208ENST00000553370 SSH1Q8WYL5 1049 aa12.36□□□□□ -0.43
ACTN1-208ENST00000553370 SIL1Q9H173 461 aa12.36□□□□□ -0.43
ACTN1-208ENST00000553370 PTPN22Q9Y2R2 807 aa12.36□□□□□ -0.43
ACTN1-208ENST00000553370 MKI67P46013 3256 aaKnown RBP12.35□□□□□ -0.43
ACTN1-208ENST00000553370 SNAPC2Q13487 334 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-208ENST00000553370 NBPF11Q86T75 865 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.35□□□□□ -0.43
ACTN1-208ENST00000553370 WDR66Q8TBY9 1149 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 ZDHHC15Q96MV8 337 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 TEPSINQ96N21 525 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 ZNF341Q9BYN7 854 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 HDAC5Q9UQL6 1122 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 KIF16BQ96L93 1317 aa12.35□□□□□ -0.43
ACTN1-208ENST00000553370 DOCK1Q14185 1865 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 EYA2O00167 538 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 GRIK5Q16478 980 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 ATP2B3Q16720 1220 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 FAM83AQ86UY5 434 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 ERO1BQ86YB8 467 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 LPIN2Q92539 896 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 GCC1Q96CN9 775 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 PTPN18Q99952 460 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 MFRPQ9BY79 579 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
ACTN1-208ENST00000553370 PTPRFP10586 1907 aa12.33□□□□□ -0.44
ACTN1-208ENST00000553370 RPAP1Q9BWH6 1393 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-208ENST00000553370 TESPA1A2RU30 521 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-208ENST00000553370 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
ACTN1-208ENST00000553370 MYCP01106 439 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-208ENST00000553370 LDHBP07195 334 aaKnown RBP12.33□□□□□ -0.44
ACTN1-208ENST00000553370 TCP10Q12799 353 aa12.33□□□□□ -0.44
ACTN1-208ENST00000553370 ALDH1L2Q3SY69 923 aa12.33□□□□□ -0.44
ACTN1-208ENST00000553370 HHIPL2Q6UWX4 724 aa12.33□□□□□ -0.44
ACTN1-208ENST00000553370 VGLL2Q8N8G2 317 aa12.33□□□□□ -0.44
ACTN1-208ENST00000553370 ZKSCAN4Q969J2 545 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-208ENST00000553370 USP44Q9H0E7 712 aa12.33□□□□□ -0.44
ACTN1-208ENST00000553370 CEP126Q9P2H0 1117 aa12.33□□□□□ -0.44
ACTN1-208ENST00000553370 PPIL2Q13356 520 aa12.32□□□□□ -0.44
ACTN1-208ENST00000553370 FKBP1CQ5VVH2 108 aa12.32□□□□□ -0.44
ACTN1-208ENST00000553370 MIGA2Q7L4E1 593 aa12.32□□□□□ -0.44
ACTN1-208ENST00000553370 FAM43AQ8N2R8 423 aa12.32□□□□□ -0.44
ACTN1-208ENST00000553370 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
ACTN1-208ENST00000553370 SNCAIPQ9Y6H5 919 aa12.32□□□□□ -0.44
ACTN1-208ENST00000553370 TRIOBPQ9H2D6 2365 aa12.32□□□□□ -0.44
ACTN1-208ENST00000553370 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
ACTN1-208ENST00000553370 TULP1O00294 542 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-208ENST00000553370 DIXDC1Q155Q3 683 aa12.31□□□□□ -0.44
ACTN1-208ENST00000553370 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
ACTN1-208ENST00000553370 DZIP1Q86YF9 867 aaKnown RBP12.31□□□□□ -0.44
ACTN1-208ENST00000553370 ZSCAN29Q8IWY8 852 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-208ENST00000553370 API5Q9BZZ5 524 aaKnown RBP12.31□□□□□ -0.44
ACTN1-208ENST00000553370 PTCH2Q9Y6C5 1203 aa12.31□□□□□ -0.44
ACTN1-208ENST00000553370 BTBD19C9JJ37 291 aa12.3□□□□□ -0.44
ACTN1-208ENST00000553370 IRF6O14896 467 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms