RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 DYNLL1P63167 89 aaKnown RBP10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 ALX1Q15699 326 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 NFXL1Q6ZNB6 911 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 MFSD6Q6ZSS7 791 aa10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 GPR101Q96P66 508 aaPredicted RBP10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 TFIP11Q9UBB9 837 aaKnown RBP10.67□□□□□ -0.7
RAB3IP-218ENST00000553099 MYH15Q9Y2K3 1946 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 ZMYM6O95789 1325 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 PRDX5P30044 214 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 RBM6P78332 1123 aaKnown RBP10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 MICU3Q86XE3 530 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 CCDC144CPQ8IYA2 1237 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 PROM2Q8N271 834 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 FBXL16Q8N461 479 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 MYH2Q9UKX2 1941 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 SEMA3EO15041 775 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 AKNAD1Q5T1N1 836 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 ZKSCAN3Q9BRR0 538 aa10.66□□□□□ -0.7
RAB3IP-218ENST00000553099 WDR19Q8NEZ3 1342 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 DHX16O60231 1041 aaKnown RBP10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 APBA3O96018 575 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 EVCP57679 992 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 MECOMQ03112 1051 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 ZNF772Q68DY9 489 aaPredicted RBP10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 TTC6Q86TZ1 520 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 CHMP4CQ96CF2 233 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 SPATA32Q96LK8 384 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 SENP2Q9HC62 589 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 HPS5Q9UPZ3 1129 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 XDHP47989 1333 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 SALL1Q9NSC2 1324 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 SH2B2O14492 632 aaPredicted RBP10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 IFIT3O14879 490 aaKnown RBP10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 METAP2P50579 478 aaKnown RBP eCLIP10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 CEBPZQ03701 1054 aaKnown RBP10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 DDR1Q08345 913 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 ZNF384Q8TF68 577 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 MYL10Q9BUA6 226 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 CNNM2Q9H8M5 875 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 AATFQ9NY61 560 aaKnown RBP eCLIP10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 ZSWIM5Q9P217 1185 aa10.65□□□□□ -0.7
RAB3IP-218ENST00000553099 TIAM2Q8IVF5 1701 aa10.65□□□□□ -0.71
RAB3IP-218ENST00000553099 NASPP49321 788 aaPredicted RBP10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 PPARAQ07869 468 aa10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 DZIP1Q86YF9 867 aaKnown RBP10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 NSUN4Q96CB9 384 aaKnown RBP10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 TMEM87BQ96K49 555 aa10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 KRT23Q9C075 422 aa10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 ORC3Q9UBD5 711 aaPredicted RBP10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 TACC3Q9Y6A5 838 aa10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 GOLGA6L4A6NEF3 574 aa10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 UFL1O94874 794 aa10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 RESTQ13127 1097 aa10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 ZNF827Q17R98 1081 aa10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 APOA5Q6Q788 366 aa10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 LRSAM1Q6UWE0 723 aa10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 RBM17Q96I25 401 aaKnown RBP10.64□□□□□ -0.71
RAB3IP-218ENST00000553099 CYP2D7A0A087X1C5 515 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 SMIM22K7EJ46 135 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 POLRMTO00411 1230 aaKnown RBP10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 FDPSP14324 419 aaKnown RBP10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 ADD1P35611 737 aaKnown RBP10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 OTUD7BQ6GQQ9 843 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 STAG1Q8WVM7 1258 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 SCAND2PQ9GZW5 306 aaPredicted RBP10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 ZSCAN16Q9H4T2 348 aaPredicted RBP10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 LEMD3Q9Y2U8 911 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 MAST2Q6P0Q8 1798 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 ERICH2A1L162 156 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 ZBTB43O43298 467 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 GPSM2P81274 684 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 SART3Q15020 963 aaKnown RBP10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 CRY2Q49AN0 593 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 ZNF804AQ7Z570 1209 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 IGDCC4Q8TDY8 1250 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 C8orf76Q96K31 380 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 RNF41Q9H4P4 317 aaPredicted RBP10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 LY9Q9HBG7 655 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 SLC12A7Q9Y666 1083 aa10.63□□□□□ -0.71
RAB3IP-218ENST00000553099 GOLGA8AA7E2F4 631 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 SLC4A8Q2Y0W8 1093 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 CCDC183Q5T5S1 534 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 RBSNQ9H1K0 784 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 PRDM1O75626 825 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 WTAPQ15007 396 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 RNF214Q8ND24 703 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 ANP32BQ92688 251 aaKnown RBP10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 PHKBQ93100 1093 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 UBAC1Q9BSL1 405 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 GJB4Q9NTQ9 266 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 PDS5AQ29RF7 1337 aaKnown RBP10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 ECM29Q5VYK3 1845 aa10.62□□□□□ -0.71
RAB3IP-218ENST00000553099 LDHBP07195 334 aaKnown RBP10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 CDC27P30260 824 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 CPLX2Q6PUV4 134 aaKnown RBP10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 SYNE3Q6ZMZ3 975 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 LEO1Q8WVC0 666 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms