RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SP3Q02447 781 aa10.89□□□□□ -0.67
TMEM116-217ENST00000552801 KIF22Q14807 665 aa10.89□□□□□ -0.67
TMEM116-217ENST00000552801 EFCC1Q9HA90 598 aa10.89□□□□□ -0.67
TMEM116-217ENST00000552801 ZFYVE28Q9HCC9 887 aa10.89□□□□□ -0.67
TMEM116-217ENST00000552801 IQSEC3Q9UPP2 1182 aaPredicted RBP10.89□□□□□ -0.67
TMEM116-217ENST00000552801 USP2O75604 605 aaPredicted RBP10.88□□□□□ -0.67
TMEM116-217ENST00000552801 PTPRCP08575 1304 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 GTF2A2P52657 109 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 MAP3K9P80192 1104 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 CRHR2Q13324 411 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 TAF1CQ15572 869 aaPredicted RBP10.88□□□□□ -0.67
TMEM116-217ENST00000552801 PDE4DIPQ5VU43 2346 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 MAMSTRQ6ZN01 415 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 OTOP1Q7RTM1 612 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 NBPF11Q86T75 865 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 CD99L2Q8TCZ2 262 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 ARAP2Q8WZ64 1704 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 GCC1Q96CN9 775 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 FAM84BQ96KN1 310 aaPredicted RBP10.88□□□□□ -0.67
TMEM116-217ENST00000552801 YTHDC1Q96MU7 727 aaKnown RBP10.88□□□□□ -0.67
TMEM116-217ENST00000552801 PUS3Q9BZE2 481 aaKnown RBP10.88□□□□□ -0.67
TMEM116-217ENST00000552801 BICC1Q9H694 974 aaKnown RBP10.88□□□□□ -0.67
TMEM116-217ENST00000552801 IRS2Q9Y4H2 1338 aa10.88□□□□□ -0.67
TMEM116-217ENST00000552801 AK9Q5TCS8 1911 aa10.87□□□□□ -0.67
TMEM116-217ENST00000552801 CCL15-CCL14A0A0B4J2E2 113 aa10.87□□□□□ -0.67
TMEM116-217ENST00000552801 IGF2BP3O00425 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
TMEM116-217ENST00000552801 NBPF7P0C2Y1 421 aaPredicted RBP10.87□□□□□ -0.67
TMEM116-217ENST00000552801 SLC5A1P13866 664 aa10.87□□□□□ -0.67
TMEM116-217ENST00000552801 CCL15Q16663 113 aa10.87□□□□□ -0.67
TMEM116-217ENST00000552801 DCAF15Q66K64 600 aa10.87□□□□□ -0.67
TMEM116-217ENST00000552801 FBXO22Q8NEZ5 403 aa10.87□□□□□ -0.67
TMEM116-217ENST00000552801 OTUD5Q96G74 571 aa10.87□□□□□ -0.67
TMEM116-217ENST00000552801 TMEM39BQ9GZU3 492 aa10.87□□□□□ -0.67
TMEM116-217ENST00000552801 R3HDMLQ9H3Y0 253 aa10.87□□□□□ -0.67
TMEM116-217ENST00000552801 HDAC5Q9UQL6 1122 aa10.87□□□□□ -0.67
TMEM116-217ENST00000552801 SSC5DA1L4H1 1573 aa10.86□□□□□ -0.67
TMEM116-217ENST00000552801 MYH13Q9UKX3 1938 aa10.86□□□□□ -0.67
TMEM116-217ENST00000552801 E9PSI1 815 aa10.86□□□□□ -0.67
TMEM116-217ENST00000552801 PDE8BO95263 885 aa10.86□□□□□ -0.67
TMEM116-217ENST00000552801 HDLBPQ00341 1268 aaKnown RBP10.86□□□□□ -0.67
TMEM116-217ENST00000552801 PUM3Q15397 648 aaKnown RBP10.86□□□□□ -0.67
TMEM116-217ENST00000552801 GNL3LQ9NVN8 582 aaKnown RBP10.86□□□□□ -0.67
TMEM116-217ENST00000552801 PCDH10Q9P2E7 1040 aa10.86□□□□□ -0.67
TMEM116-217ENST00000552801 RIPOR2Q9Y4F9 1068 aa10.86□□□□□ -0.67
TMEM116-217ENST00000552801 CETPP11597 493 aa10.85□□□□□ -0.67
TMEM116-217ENST00000552801 VGLL4Q14135 290 aa10.85□□□□□ -0.67
TMEM116-217ENST00000552801 SLC4A8Q2Y0W8 1093 aa10.85□□□□□ -0.67
TMEM116-217ENST00000552801 SLC9C1Q4G0N8 1177 aa10.85□□□□□ -0.67
TMEM116-217ENST00000552801 FBXO33Q7Z6M2 555 aa10.85□□□□□ -0.67
TMEM116-217ENST00000552801 WDR66Q8TBY9 1149 aa10.85□□□□□ -0.67
TMEM116-217ENST00000552801 BBXQ8WY36 941 aaPredicted RBP10.85□□□□□ -0.67
TMEM116-217ENST00000552801 MS4A4AQ96JQ5 239 aa10.85□□□□□ -0.67
TMEM116-217ENST00000552801 WRNIP1Q96S55 665 aa10.85□□□□□ -0.67
TMEM116-217ENST00000552801 RYDENQ9NUL5 291 aaKnown RBP10.85□□□□□ -0.67
TMEM116-217ENST00000552801 PTPN22Q9Y2R2 807 aa10.85□□□□□ -0.67
TMEM116-217ENST00000552801 SUGT1Q9Y2Z0 365 aa10.85□□□□□ -0.67
TMEM116-217ENST00000552801 OTOFQ9HC10 1997 aa10.84□□□□□ -0.67
TMEM116-217ENST00000552801 CACNB3P54284 484 aa10.84□□□□□ -0.67
TMEM116-217ENST00000552801 SNAPC2Q13487 334 aa10.84□□□□□ -0.67
TMEM116-217ENST00000552801 LRRC24Q50LG9 513 aa10.84□□□□□ -0.67
TMEM116-217ENST00000552801 ERO1BQ86YB8 467 aa10.84□□□□□ -0.67
TMEM116-217ENST00000552801 SCUBE2Q9NQ36 999 aa10.84□□□□□ -0.67
TMEM116-217ENST00000552801 SMC4Q9NTJ3 1288 aa10.84□□□□□ -0.67
TMEM116-217ENST00000552801 UTYO14607 1347 aa10.83□□□□□ -0.68
TMEM116-217ENST00000552801 AOX1Q06278 1338 aa10.83□□□□□ -0.68
TMEM116-217ENST00000552801 TESPA1A2RU30 521 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-217ENST00000552801 UBTFL1P0CB47 393 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-217ENST00000552801 GJA5P36382 358 aa10.83□□□□□ -0.68
TMEM116-217ENST00000552801 BCAMP50895 628 aa10.83□□□□□ -0.68
TMEM116-217ENST00000552801 RABL6Q3YEC7 729 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-217ENST00000552801 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.83□□□□□ -0.68
TMEM116-217ENST00000552801 FAM83AQ86UY5 434 aa10.83□□□□□ -0.68
TMEM116-217ENST00000552801 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
TMEM116-217ENST00000552801 LPIN2Q92539 896 aa10.83□□□□□ -0.68
TMEM116-217ENST00000552801 ZDHHC15Q96MV8 337 aa10.83□□□□□ -0.68
TMEM116-217ENST00000552801 ZNF341Q9BYN7 854 aa10.83□□□□□ -0.68
TMEM116-217ENST00000552801 BOLA1Q9Y3E2 137 aa10.83□□□□□ -0.68
TMEM116-217ENST00000552801 LAMB1P07942 1786 aa10.83□□□□□ -0.68
TMEM116-217ENST00000552801 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.82□□□□□ -0.68
TMEM116-217ENST00000552801 KLHDC4Q8TBB5 520 aa10.82□□□□□ -0.68
TMEM116-217ENST00000552801 BRI3BPQ8WY22 251 aa10.82□□□□□ -0.68
TMEM116-217ENST00000552801 KAZALD1Q96I82 304 aa10.82□□□□□ -0.68
TMEM116-217ENST00000552801 PTPN18Q99952 460 aa10.82□□□□□ -0.68
TMEM116-217ENST00000552801 MRIQ9BWK5 157 aa10.82□□□□□ -0.68
TMEM116-217ENST00000552801 CEP126Q9P2H0 1117 aa10.82□□□□□ -0.68
TMEM116-217ENST00000552801 KIF16BQ96L93 1317 aa10.81□□□□□ -0.68
TMEM116-217ENST00000552801 SPDYE5A6NIY4 337 aa10.81□□□□□ -0.68
TMEM116-217ENST00000552801 EYA2O00167 538 aa10.81□□□□□ -0.68
TMEM116-217ENST00000552801 MYCP01106 439 aaPredicted RBP10.81□□□□□ -0.68
TMEM116-217ENST00000552801 LDHBP07195 334 aaKnown RBP10.81□□□□□ -0.68
TMEM116-217ENST00000552801 FKBP1CQ5VVH2 108 aa10.81□□□□□ -0.68
TMEM116-217ENST00000552801 HHIPL2Q6UWX4 724 aa10.81□□□□□ -0.68
TMEM116-217ENST00000552801 ZGPATQ8N5A5 531 aaKnown RBP10.81□□□□□ -0.68
TMEM116-217ENST00000552801 ANKRD44Q8N8A2 993 aa10.81□□□□□ -0.68
TMEM116-217ENST00000552801 SSH1Q8WYL5 1049 aa10.81□□□□□ -0.68
TMEM116-217ENST00000552801 ZKSCAN4Q969J2 545 aaPredicted RBP10.81□□□□□ -0.68
TMEM116-217ENST00000552801 TEPSINQ96N21 525 aa10.81□□□□□ -0.68
TMEM116-217ENST00000552801 SIL1Q9H173 461 aa10.81□□□□□ -0.68
TMEM116-217ENST00000552801 HOXD10P28358 340 aa10.8□□□□□ -0.68
TMEM116-217ENST00000552801 TCP10Q12799 353 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms