RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
UBE2N-206ENST00000552442 ZNF280AP59817 542 aaPredicted RBP11.32□□□□□ -0.6
UBE2N-206ENST00000552442 CDC37L1Q7L3B6 337 aa11.32□□□□□ -0.6
UBE2N-206ENST00000552442 ZNF804AQ7Z570 1209 aa11.32□□□□□ -0.6
UBE2N-206ENST00000552442 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
UBE2N-206ENST00000552442 KCTD12Q96CX2 325 aaKnown RBP11.32□□□□□ -0.6
UBE2N-206ENST00000552442 LRCH3Q96II8 777 aa11.32□□□□□ -0.6
UBE2N-206ENST00000552442 MXD3Q9BW11 206 aa11.32□□□□□ -0.6
UBE2N-206ENST00000552442 TMEM134Q9H6X4 195 aa11.32□□□□□ -0.6
UBE2N-206ENST00000552442 CD209Q9NNX6 404 aa11.32□□□□□ -0.6
UBE2N-206ENST00000552442 ABT1Q9ULW3 272 aaKnown RBP11.32□□□□□ -0.6
UBE2N-206ENST00000552442 GTF2IP78347 998 aa11.31□□□□□ -0.6
UBE2N-206ENST00000552442 UBE4AQ14139 1066 aa11.31□□□□□ -0.6
UBE2N-206ENST00000552442 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
UBE2N-206ENST00000552442 INTS3Q68E01 1043 aaKnown RBP11.31□□□□□ -0.6
UBE2N-206ENST00000552442 TTLL5Q6EMB2 1281 aa11.31□□□□□ -0.6
UBE2N-206ENST00000552442 KLHDC4Q8TBB5 520 aa11.31□□□□□ -0.6
UBE2N-206ENST00000552442 FRAT1Q92837 279 aaPredicted RBP11.31□□□□□ -0.6
UBE2N-206ENST00000552442 MYOZ2Q9NPC6 264 aa11.31□□□□□ -0.6
UBE2N-206ENST00000552442 HDAC5Q9UQL6 1122 aa11.31□□□□□ -0.6
UBE2N-206ENST00000552442 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
UBE2N-206ENST00000552442 LRRFIP2Q9Y608 721 aaKnown RBP11.31□□□□□ -0.6
UBE2N-206ENST00000552442 THSD7BQ9C0I4 1608 aa11.31□□□□□ -0.6
UBE2N-206ENST00000552442 CELF2O95319 508 aaKnown RBP11.3□□□□□ -0.6
UBE2N-206ENST00000552442 TRIM27P14373 513 aa11.3□□□□□ -0.6
UBE2N-206ENST00000552442 LRRC24Q50LG9 513 aa11.3□□□□□ -0.6
UBE2N-206ENST00000552442 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
UBE2N-206ENST00000552442 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
UBE2N-206ENST00000552442 KRT26Q7Z3Y9 468 aa11.3□□□□□ -0.6
UBE2N-206ENST00000552442 USP48Q86UV5 1035 aa11.3□□□□□ -0.6
UBE2N-206ENST00000552442 DCPSQ96C86 337 aaKnown RBP11.3□□□□□ -0.6
UBE2N-206ENST00000552442 MEIS3Q99687 375 aa11.3□□□□□ -0.6
UBE2N-206ENST00000552442 ZNF408Q9H9D4 720 aa11.3□□□□□ -0.6
UBE2N-206ENST00000552442 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
UBE2N-206ENST00000552442 GGA3Q9NZ52 723 aa11.3□□□□□ -0.6
UBE2N-206ENST00000552442 ASTN2O75129 1339 aaPredicted RBP11.3□□□□□ -0.6
UBE2N-206ENST00000552442 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
UBE2N-206ENST00000552442 IL1R1P14778 569 aa11.29□□□□□ -0.6
UBE2N-206ENST00000552442 RFX5P48382 616 aaPredicted RBP11.29□□□□□ -0.6
UBE2N-206ENST00000552442 SCARF1Q14162 830 aa11.29□□□□□ -0.6
UBE2N-206ENST00000552442 DEFB115Q30KQ5 88 aa11.29□□□□□ -0.6
UBE2N-206ENST00000552442 CST9Q5W186 159 aa11.29□□□□□ -0.6
UBE2N-206ENST00000552442 ZKSCAN2Q63HK3 967 aa11.29□□□□□ -0.6
UBE2N-206ENST00000552442 OGFOD1Q8N543 542 aa11.29□□□□□ -0.6
UBE2N-206ENST00000552442 PHOX2BQ99453 314 aa11.29□□□□□ -0.6
UBE2N-206ENST00000552442 TNNQ9UQP3 1299 aa11.29□□□□□ -0.6
UBE2N-206ENST00000552442 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 ADM5C9JUS6 153 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 EYA2O00167 538 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 TRIM66O15016 1216 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 RNF40O75150 1001 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 PDE8BO95263 885 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 GNAI3P08754 354 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 HIBADHP31937 336 aaKnown RBP11.28□□□□□ -0.6
UBE2N-206ENST00000552442 GYG1P46976 350 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 VEGFBP49765 207 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 MMP14P50281 582 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 PTPN12Q05209 780 aaKnown RBP11.28□□□□□ -0.6
UBE2N-206ENST00000552442 ANGEL2Q5VTE6 544 aaKnown RBP11.28□□□□□ -0.6
UBE2N-206ENST00000552442 THSD4Q6ZMP0 1018 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 KIAA0825Q8IV33 1275 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 SULF1Q8IWU6 871 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 SLF2Q8IX21 1173 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 VGLL2Q8N8G2 317 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 CLUAP1Q96AJ1 413 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 HDAC9Q9UKV0 1011 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 TLL2Q9Y6L7 1015 aa11.28□□□□□ -0.6
UBE2N-206ENST00000552442 PAPPA2Q9BXP8 1791 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 PUM3Q15397 648 aaKnown RBP11.27□□□□□ -0.61
UBE2N-206ENST00000552442 AMHR2Q16671 573 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 DLK2Q6UY11 383 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 VPS37DQ86XT2 251 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 CERS5Q8N5B7 392 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 FAM84BQ96KN1 310 aaPredicted RBP11.27□□□□□ -0.61
UBE2N-206ENST00000552442 SIL1Q9H173 461 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 JAG2Q9Y219 1238 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 FAM205AQ6ZU69 1335 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 PITPNM2Q9BZ72 1349 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.61
UBE2N-206ENST00000552442 SASH1O94885 1247 aa11.26□□□□□ -0.61
UBE2N-206ENST00000552442 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
UBE2N-206ENST00000552442 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
UBE2N-206ENST00000552442 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
UBE2N-206ENST00000552442 CLCN1P35523 988 aa11.26□□□□□ -0.61
UBE2N-206ENST00000552442 ECE1P42892 770 aa11.26□□□□□ -0.61
UBE2N-206ENST00000552442 BCAMP50895 628 aa11.26□□□□□ -0.61
UBE2N-206ENST00000552442 FKBP1AP62942 108 aaKnown RBP11.26□□□□□ -0.61
UBE2N-206ENST00000552442 MDM2Q00987 491 aaPredicted RBP11.26□□□□□ -0.61
UBE2N-206ENST00000552442 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
UBE2N-206ENST00000552442 NBPF9Q3BBW0 867 aa11.26□□□□□ -0.61
UBE2N-206ENST00000552442 CAVIN4Q5BKX8 364 aa11.26□□□□□ -0.61
UBE2N-206ENST00000552442 TDRD7Q8NHU6 1098 aaKnown RBP11.26□□□□□ -0.61
UBE2N-206ENST00000552442 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
UBE2N-206ENST00000552442 CDCA5Q96FF9 252 aa11.26□□□□□ -0.61
UBE2N-206ENST00000552442 CAPNS2Q96L46 248 aa11.26□□□□□ -0.61
UBE2N-206ENST00000552442 WDR33Q9C0J8 1336 aaKnown RBP11.26□□□□□ -0.61
UBE2N-206ENST00000552442 F8W031 263 aaPredicted RBP11.25□□□□□ -0.61
UBE2N-206ENST00000552442 WNT10BO00744 389 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms