RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 FAM83AQ86UY5 434 aa13.42□□□□□ -0.26
TMEM116-215ENST00000552374 SLF2Q8IX21 1173 aa13.42□□□□□ -0.26
TMEM116-215ENST00000552374 CCDC8Q9H0W5 538 aaPredicted RBP13.42□□□□□ -0.26
TMEM116-215ENST00000552374 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
TMEM116-215ENST00000552374 ELP3Q9H9T3 547 aa13.42□□□□□ -0.26
TMEM116-215ENST00000552374 GPR108Q9NPR9 543 aa13.42□□□□□ -0.26
TMEM116-215ENST00000552374 SNRKQ9NRH2 765 aa13.42□□□□□ -0.26
TMEM116-215ENST00000552374 SAGE1Q9NXZ1 904 aa13.42□□□□□ -0.26
TMEM116-215ENST00000552374 EXOC6BQ9Y2D4 811 aa13.42□□□□□ -0.26
TMEM116-215ENST00000552374 PAPPA2Q9BXP8 1791 aa13.42□□□□□ -0.26
TMEM116-215ENST00000552374 ZBTB22O15209 634 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 TBC1D8O95759 1140 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 ARID4AP29374 1257 aaPredicted RBP13.41□□□□□ -0.26
TMEM116-215ENST00000552374 MCAMP43121 646 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 MECOMQ03112 1051 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 SREBF2Q12772 1141 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 NFIAQ12857 509 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.41□□□□□ -0.26
TMEM116-215ENST00000552374 WNK4Q96J92 1243 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 ZBTB40Q9NUA8 1239 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 RAI14Q9P0K7 980 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 LRP2BPQ9P2M1 347 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 SSC5DA1L4H1 1573 aa13.41□□□□□ -0.26
TMEM116-215ENST00000552374 PDS5AQ29RF7 1337 aaKnown RBP13.41□□□□□ -0.26
TMEM116-215ENST00000552374 UNCXA6NJT0 531 aa13.4□□□□□ -0.26
TMEM116-215ENST00000552374 C20orf194Q5TEA3 1177 aa13.4□□□□□ -0.26
TMEM116-215ENST00000552374 FAM151AQ8WW52 585 aa13.4□□□□□ -0.26
TMEM116-215ENST00000552374 HOOK2Q96ED9 719 aa13.4□□□□□ -0.26
TMEM116-215ENST00000552374 CHMP4BQ9H444 224 aaKnown RBP13.4□□□□□ -0.26
TMEM116-215ENST00000552374 CSADQ9Y600 493 aa13.4□□□□□ -0.26
TMEM116-215ENST00000552374 MANSC4A6NHS7 340 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-215ENST00000552374 APBB1O00213 710 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-215ENST00000552374 ZFPM1Q8IX07 1006 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 RPAP2Q8IXW5 612 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-215ENST00000552374 EAF2Q96CJ1 260 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-215ENST00000552374 OPTNQ96CV9 577 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 YTHDC1Q96MU7 727 aaKnown RBP13.39□□□□□ -0.27
TMEM116-215ENST00000552374 FAM198AQ9UFP1 575 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 HMMRO75330 724 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 LDHCP07864 332 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 ZBTB48P10074 688 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-215ENST00000552374 GJA5P36382 358 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 BTDP43251 543 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 INHBEP58166 350 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 GSTO1P78417 241 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 VGLL4Q14135 290 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 PDE3AQ14432 1141 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 HSP90AB4PQ58FF6 505 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 DCAF15Q66K64 600 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 ERC1Q8IUD2 1116 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 NSUN4Q96CB9 384 aaKnown RBP13.39□□□□□ -0.27
TMEM116-215ENST00000552374 FAM163AQ96GL9 167 aaPredicted RBP13.39□□□□□ -0.27
TMEM116-215ENST00000552374 WRNIP1Q96S55 665 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 IL1RAPL2Q9NP60 686 aa13.39□□□□□ -0.27
TMEM116-215ENST00000552374 TLR7Q9NYK1 1049 aaKnown RBP13.39□□□□□ -0.27
TMEM116-215ENST00000552374 DBNLQ9UJU6 430 aaKnown RBP13.39□□□□□ -0.27
TMEM116-215ENST00000552374 GAKO14976 1311 aa13.38□□□□□ -0.27
TMEM116-215ENST00000552374 RGS3P49796 1198 aa13.38□□□□□ -0.27
TMEM116-215ENST00000552374 PICALMQ13492 652 aa13.38□□□□□ -0.27
TMEM116-215ENST00000552374 AACSQ86V21 672 aa13.38□□□□□ -0.27
TMEM116-215ENST00000552374 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-215ENST00000552374 SIRT2Q8IXJ6 389 aa13.38□□□□□ -0.27
TMEM116-215ENST00000552374 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMEM116-215ENST00000552374 ZKSCAN4Q969J2 545 aaPredicted RBP13.38□□□□□ -0.27
TMEM116-215ENST00000552374 ZNF341Q9BYN7 854 aa13.38□□□□□ -0.27
TMEM116-215ENST00000552374 THSD7BQ9C0I4 1608 aa13.37□□□□□ -0.27
TMEM116-215ENST00000552374 MROH7-TTC4A0A0A0MT08 1334 aa13.37□□□□□ -0.27
TMEM116-215ENST00000552374 GPR75-ASB3A0A0A6YYF3 556 aa13.37□□□□□ -0.27
TMEM116-215ENST00000552374 ZAP70P43403 619 aa13.37□□□□□ -0.27
TMEM116-215ENST00000552374 DGKZQ13574 1117 aa13.37□□□□□ -0.27
TMEM116-215ENST00000552374 IFNL1Q8IU54 200 aa13.37□□□□□ -0.27
TMEM116-215ENST00000552374 RHPN1Q8TCX5 695 aa13.37□□□□□ -0.27
TMEM116-215ENST00000552374 ZNF384Q8TF68 577 aa13.37□□□□□ -0.27
TMEM116-215ENST00000552374 IDI2Q9BXS1 227 aa13.37□□□□□ -0.27
TMEM116-215ENST00000552374 ENTPD3O75355 529 aa13.36□□□□□ -0.27
TMEM116-215ENST00000552374 ALDH1A1P00352 501 aa13.36□□□□□ -0.27
TMEM116-215ENST00000552374 CYP2E1P05181 493 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-215ENST00000552374 OTUD7BQ6GQQ9 843 aa13.36□□□□□ -0.27
TMEM116-215ENST00000552374 NAA16Q6N069 864 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-215ENST00000552374 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
TMEM116-215ENST00000552374 ABHD8Q96I13 439 aa13.36□□□□□ -0.27
TMEM116-215ENST00000552374 ZNF512BQ96KM6 892 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-215ENST00000552374 R3HDMLQ9H3Y0 253 aa13.36□□□□□ -0.27
TMEM116-215ENST00000552374 GPR25O00155 361 aa13.35□□□□□ -0.27
TMEM116-215ENST00000552374 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
TMEM116-215ENST00000552374 WDHD1O75717 1129 aaPredicted RBP13.35□□□□□ -0.27
TMEM116-215ENST00000552374 INPP5BP32019 993 aa13.35□□□□□ -0.27
TMEM116-215ENST00000552374 RHBDL3P58872 404 aa13.35□□□□□ -0.27
TMEM116-215ENST00000552374 CLASRPQ8N2M8 674 aaKnown RBP13.35□□□□□ -0.27
TMEM116-215ENST00000552374 ZNF296Q8WUU4 475 aaPredicted RBP13.35□□□□□ -0.27
TMEM116-215ENST00000552374 KIF1BPQ96EK5 621 aa13.35□□□□□ -0.27
TMEM116-215ENST00000552374 PTPN18Q99952 460 aa13.35□□□□□ -0.27
TMEM116-215ENST00000552374 NOL10Q9BSC4 688 aaKnown RBP13.35□□□□□ -0.27
TMEM116-215ENST00000552374 MCOLN1Q9GZU1 580 aa13.35□□□□□ -0.27
TMEM116-215ENST00000552374 DDX4Q9NQI0 724 aaKnown RBP13.35□□□□□ -0.27
TMEM116-215ENST00000552374 NDUFB9Q9Y6M9 179 aa13.35□□□□□ -0.27
TMEM116-215ENST00000552374 DDTLA6NHG4 134 aaPredicted RBP13.34□□□□□ -0.27
TMEM116-215ENST00000552374 CCDC85CA6NKD9 419 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms