RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 MAP7Q14244 749 aa6.92□□□□□ -1.3
HCFC2-206ENST00000552343 SPRED2Q7Z698 418 aa6.92□□□□□ -1.3
HCFC2-206ENST00000552343 DMRTB1Q96MA1 342 aa6.92□□□□□ -1.3
HCFC2-206ENST00000552343 FARP2O94887 1054 aaPredicted RBP6.91□□□□□ -1.3
HCFC2-206ENST00000552343 RAB6AP20340 208 aa6.91□□□□□ -1.3
HCFC2-206ENST00000552343 EIF1AXP47813 144 aaKnown RBP6.91□□□□□ -1.3
HCFC2-206ENST00000552343 ARHGAP4P98171 946 aa6.91□□□□□ -1.3
HCFC2-206ENST00000552343 DNM1Q05193 864 aaKnown RBP6.91□□□□□ -1.3
HCFC2-206ENST00000552343 MTMR3Q13615 1198 aa6.91□□□□□ -1.3
HCFC2-206ENST00000552343 C8orf34Q49A92 452 aa6.91□□□□□ -1.3
HCFC2-206ENST00000552343 ASAP3Q8TDY4 903 aa6.91□□□□□ -1.3
HCFC2-206ENST00000552343 RBCK1Q9BYM8 510 aa6.91□□□□□ -1.3
HCFC2-206ENST00000552343 NRSN2Q9GZP1 204 aa6.91□□□□□ -1.3
HCFC2-206ENST00000552343 SEMA6CQ9H3T2 930 aa6.91□□□□□ -1.3
HCFC2-206ENST00000552343 ANKRD33BA6NCL7 494 aa6.9□□□□□ -1.3
HCFC2-206ENST00000552343 E9PSI1 815 aa6.9□□□□□ -1.3
HCFC2-206ENST00000552343 EREGO14944 169 aa6.9□□□□□ -1.3
HCFC2-206ENST00000552343 RBM25P49756 843 aaKnown RBP6.9□□□□□ -1.3
HCFC2-206ENST00000552343 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.3
HCFC2-206ENST00000552343 BCL2L13Q9BXK5 485 aa6.9□□□□□ -1.3
HCFC2-206ENST00000552343 BHLHE41Q9C0J9 482 aaPredicted RBP6.9□□□□□ -1.3
HCFC2-206ENST00000552343 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
HCFC2-206ENST00000552343 PDGFAP04085 211 aa6.89□□□□□ -1.31
HCFC2-206ENST00000552343 MZF1P28698 734 aaPredicted RBP6.89□□□□□ -1.31
HCFC2-206ENST00000552343 STK11IPQ8N1F8 1099 aa6.89□□□□□ -1.31
HCFC2-206ENST00000552343 ACSS3Q9H6R3 686 aa6.89□□□□□ -1.31
HCFC2-206ENST00000552343 CTSBP07858 339 aa6.88□□□□□ -1.31
HCFC2-206ENST00000552343 ATP2B2Q01814 1243 aa6.88□□□□□ -1.31
HCFC2-206ENST00000552343 BNIP3Q12983 259 aa6.88□□□□□ -1.31
HCFC2-206ENST00000552343 PKN1Q16512 942 aa6.88□□□□□ -1.31
HCFC2-206ENST00000552343 SEZ6L2Q6UXD5 910 aa6.88□□□□□ -1.31
HCFC2-206ENST00000552343 DNAJC14Q6Y2X3 702 aaPredicted RBP6.88□□□□□ -1.31
HCFC2-206ENST00000552343 DYMQ7RTS9 669 aa6.88□□□□□ -1.31
HCFC2-206ENST00000552343 ATG4DQ86TL0 474 aaPredicted RBP6.88□□□□□ -1.31
HCFC2-206ENST00000552343 FAM168AQ92567 244 aa6.88□□□□□ -1.31
HCFC2-206ENST00000552343 C1GALT1Q9NS00 363 aa6.88□□□□□ -1.31
HCFC2-206ENST00000552343 FAM105AQ9NUU6 356 aa6.88□□□□□ -1.31
HCFC2-206ENST00000552343 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.87□□□□□ -1.31
HCFC2-206ENST00000552343 RBM47A0AV96 593 aaKnown RBP6.87□□□□□ -1.31
HCFC2-206ENST00000552343 DYNC1LI2O43237 492 aaPredicted RBP6.87□□□□□ -1.31
HCFC2-206ENST00000552343 EDN3P14138 238 aa6.87□□□□□ -1.31
HCFC2-206ENST00000552343 EAPPQ56P03 285 aaPredicted RBP6.87□□□□□ -1.31
HCFC2-206ENST00000552343 KSR1Q8IVT5 923 aa6.87□□□□□ -1.31
HCFC2-206ENST00000552343 GLIS3Q8NEA6 775 aa6.87□□□□□ -1.31
HCFC2-206ENST00000552343 METTL12A8MUP2 240 aa6.86□□□□□ -1.31
HCFC2-206ENST00000552343 MAOBP27338 520 aa6.86□□□□□ -1.31
HCFC2-206ENST00000552343 AKAP4Q5JQC9 854 aa6.86□□□□□ -1.31
HCFC2-206ENST00000552343 OGFOD3Q6PK18 319 aa6.86□□□□□ -1.31
HCFC2-206ENST00000552343 RC3H2Q9HBD1 1191 aaKnown RBP6.86□□□□□ -1.31
HCFC2-206ENST00000552343 EIF4EBP3O60516 100 aaPredicted RBP6.85□□□□□ -1.31
HCFC2-206ENST00000552343 PHACTR2O75167 634 aa6.85□□□□□ -1.31
HCFC2-206ENST00000552343 TNFRSF21O75509 655 aa6.85□□□□□ -1.31
HCFC2-206ENST00000552343 RNASE1P07998 156 aaKnown RBP6.85□□□□□ -1.31
HCFC2-206ENST00000552343 FUT4P22083 530 aa6.85□□□□□ -1.31
HCFC2-206ENST00000552343 PLCB3Q01970 1234 aa6.85□□□□□ -1.31
HCFC2-206ENST00000552343 PEAR1Q5VY43 1037 aaPredicted RBP6.85□□□□□ -1.31
HCFC2-206ENST00000552343 TMEM40Q8WWA1 233 aa6.85□□□□□ -1.31
HCFC2-206ENST00000552343 MISP3Q96FF7 219 aa6.85□□□□□ -1.31
HCFC2-206ENST00000552343 LATS2Q9NRM7 1088 aa6.85□□□□□ -1.31
HCFC2-206ENST00000552343 MBNL3Q9NUK0 354 aaKnown RBP6.85□□□□□ -1.31
HCFC2-206ENST00000552343 FZD6O60353 706 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 CD8BP10966 210 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 ASPAP45381 313 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 POU4F3Q15319 338 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 ECM1Q16610 540 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 NPAS4Q8IUM7 802 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 GIPC2Q8TF65 315 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 GSX1Q9H4S2 264 aaPredicted RBP6.84□□□□□ -1.31
HCFC2-206ENST00000552343 LGR6Q9HBX8 967 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 RAD18Q9NS91 495 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 ADAMTS6Q9UKP5 1117 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 DAGLAQ9Y4D2 1042 aa6.84□□□□□ -1.31
HCFC2-206ENST00000552343 PCDH1Q08174 1060 aa6.83□□□□□ -1.32
HCFC2-206ENST00000552343 ZNF423Q2M1K9 1284 aa6.83□□□□□ -1.32
HCFC2-206ENST00000552343 LCE5AQ5TCM9 118 aa6.83□□□□□ -1.32
HCFC2-206ENST00000552343 TMC7Q7Z402 723 aa6.83□□□□□ -1.32
HCFC2-206ENST00000552343 PLD6Q8N2A8 252 aaKnown RBP6.83□□□□□ -1.32
HCFC2-206ENST00000552343 ALKBH8Q96BT7 664 aaKnown RBP6.83□□□□□ -1.32
HCFC2-206ENST00000552343 SLC38A3Q99624 504 aa6.83□□□□□ -1.32
HCFC2-206ENST00000552343 FOXD3Q9UJU5 478 aaPredicted RBP6.83□□□□□ -1.32
HCFC2-206ENST00000552343 POLIQ9UNA4 740 aa6.83□□□□□ -1.32
HCFC2-206ENST00000552343 AP4E1Q9UPM8 1137 aa6.83□□□□□ -1.32
HCFC2-206ENST00000552343 TREHO43280 583 aa6.82□□□□□ -1.32
HCFC2-206ENST00000552343 CYP11A1P05108 521 aa6.82□□□□□ -1.32
HCFC2-206ENST00000552343 CYP27C1Q4G0S4 372 aa6.82□□□□□ -1.32
HCFC2-206ENST00000552343 GJD3Q8N144 294 aa6.82□□□□□ -1.32
HCFC2-206ENST00000552343 SNX29Q8TEQ0 813 aa6.82□□□□□ -1.32
HCFC2-206ENST00000552343 FAM129BQ96TA1 746 aa6.82□□□□□ -1.32
HCFC2-206ENST00000552343 CCDC87Q9NVE4 849 aa6.82□□□□□ -1.32
HCFC2-206ENST00000552343 ECEL1O95672 775 aa6.81□□□□□ -1.32
HCFC2-206ENST00000552343 CD96P40200 585 aa6.81□□□□□ -1.32
HCFC2-206ENST00000552343 MAPK8P45983 427 aa6.81□□□□□ -1.32
HCFC2-206ENST00000552343 XPCQ01831 940 aaPredicted RBP6.81□□□□□ -1.32
HCFC2-206ENST00000552343 MESP2Q0VG99 397 aa6.81□□□□□ -1.32
HCFC2-206ENST00000552343 KRTAP19-4Q3LI73 84 aa6.81□□□□□ -1.32
HCFC2-206ENST00000552343 HP1BP3Q5SSJ5 553 aaPredicted RBP6.81□□□□□ -1.32
HCFC2-206ENST00000552343 ALG1LQ6GMV1 187 aa6.81□□□□□ -1.32
HCFC2-206ENST00000552343 FAM181AQ8N9Y4 354 aa6.81□□□□□ -1.32
HCFC2-206ENST00000552343 LRRN4CLQ8ND94 238 aa6.81□□□□□ -1.32
HCFC2-206ENST00000552343 NETO1Q8TDF5 533 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms