RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 MARCH6O60337 910 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 GDF11O95390 407 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 GLI3P10071 1580 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 CLEC10AQ8IUN9 316 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 COL18A1P39060 1754 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 USP17L3A6NCW0 530 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 USP17L4A6NCW7 530 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 FIBPO43427 364 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 SF3A1Q15459 793 aaKnown RBP9.62□□□□□ -0.87
CHPT1-208ENST00000552215 USP17L1Q7RTZ2 530 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 IQCA1Q86XH1 822 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 NCOA7Q8NI08 942 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 SLC12A7Q9Y666 1083 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 CYP21A2P08686 494 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 ADD2P35612 726 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 SLC10A5Q5PT55 438 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 CCDC125Q86Z20 511 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 SPICE1Q8N0Z3 855 aa9.62□□□□□ -0.87
CHPT1-208ENST00000552215 KCPQ6ZWJ8 1503 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 HLA-DOAP06340 250 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 LARP1BQ659C4 914 aaKnown RBP9.61□□□□□ -0.87
CHPT1-208ENST00000552215 RASSF8Q8NHQ8 419 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 TMX3Q96JJ7 454 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 CRAMP1Q96RY5 1269 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 H7C1D1 291 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 PSMD14O00487 310 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 NMT2O60551 498 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 GOLGA8HP0CJ92 632 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 PDE4BQ07343 736 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 CIAPIN1Q6FI81 312 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 SHTN1A0MZ66 631 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 EVX2Q03828 476 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 CFAP100Q494V2 611 aa9.61□□□□□ -0.87
CHPT1-208ENST00000552215 TFAP4Q01664 338 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 TRIM29Q14134 588 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 DLK2Q6UY11 383 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 ADGRA1Q86SQ6 560 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 CPVLQ9H3G5 476 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 GPCPD1Q9NPB8 672 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 TFIP11Q9UBB9 837 aaKnown RBP9.6□□□□□ -0.87
CHPT1-208ENST00000552215 PLCH1Q4KWH8 1693 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 GOLGA8AA7E2F4 631 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 DDNO94850 711 aaPredicted RBP9.6□□□□□ -0.87
CHPT1-208ENST00000552215 ZMYM1Q5SVZ6 1142 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 FAM173BQ6P4H8 233 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 RTKN2Q8IZC4 609 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 SUPT20HQ8NEM7 779 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 SLC16A10Q8TF71 515 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 HELLSQ9NRZ9 838 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 RGPD1P0DJD0 1748 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 E7EWF7 191 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 WTAPQ15007 396 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 SLC26A6Q9BXS9 759 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 MCM5P33992 734 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 IFIT1BQ5T764 474 aaKnown RBP9.6□□□□□ -0.87
CHPT1-208ENST00000552215 DPY19L2Q6NUT2 758 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 LRRC47Q8N1G4 583 aaKnown RBP9.6□□□□□ -0.87
CHPT1-208ENST00000552215 PHKBQ93100 1093 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 COA1Q9GZY4 146 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 LSG1Q9H089 658 aaKnown RBP9.6□□□□□ -0.87
CHPT1-208ENST00000552215 CWC22Q9HCG8 908 aaKnown RBP9.6□□□□□ -0.87
CHPT1-208ENST00000552215 GPR108Q9NPR9 543 aa9.6□□□□□ -0.87
CHPT1-208ENST00000552215 SYT17Q9BSW7 474 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 OSBPL3Q9H4L5 887 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 CRKP46108 304 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 CHMP4BP1P59074 171 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 KRT32Q14532 448 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 FBXO3Q9UK99 471 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 LIMCH1Q9UPQ0 1083 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 DOT1LQ8TEK3 1739 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 PARP4Q9UKK3 1724 aaKnown RBP9.59□□□□□ -0.87
CHPT1-208ENST00000552215 MARF1Q9Y4F3 1742 aaKnown RBP9.59□□□□□ -0.87
CHPT1-208ENST00000552215 PATL2C9JE40 543 aaKnown RBP9.59□□□□□ -0.87
CHPT1-208ENST00000552215 IARSP41252 1262 aaKnown RBP9.59□□□□□ -0.87
CHPT1-208ENST00000552215 PPARAQ07869 468 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 CSRNP1Q96S65 589 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 RAD50Q92878 1312 aa9.59□□□□□ -0.87
CHPT1-208ENST00000552215 TBC1D22AQ8WUA7 517 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 ESR2Q92731 530 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 STRBPQ96SI9 672 aaKnown RBP9.58□□□□□ -0.88
CHPT1-208ENST00000552215 KAT14Q9H8E8 782 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 JAK2O60674 1132 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 MYCNP04198 464 aaPredicted RBP9.58□□□□□ -0.88
CHPT1-208ENST00000552215 COL9A3Q14050 684 aaPredicted RBP9.58□□□□□ -0.88
CHPT1-208ENST00000552215 CREBRFQ8IUR6 639 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 FAM208AQ9UK61 1670 aaKnown RBP9.58□□□□□ -0.88
CHPT1-208ENST00000552215 METAP2P50579 478 aaKnown RBP eCLIP9.58□□□□□ -0.881e-6■■■■■ 27.4
CHPT1-208ENST00000552215 NFIAQ12857 509 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 C9orf131Q5VYM1 1079 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 CCAR1Q8IX12 1150 aaKnown RBP9.58□□□□□ -0.88
CHPT1-208ENST00000552215 MICALL2Q8IY33 904 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 CABP5Q9NP86 173 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 CLIP2Q9UDT6 1046 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 CXCL9Q07325 125 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 FBXO33Q7Z6M2 555 aa9.58□□□□□ -0.88
CHPT1-208ENST00000552215 ABCC6O95255 1503 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 GJB2P29033 226 aa9.57□□□□□ -0.88
CHPT1-208ENST00000552215 ADD1P35611 737 aaKnown RBP9.57□□□□□ -0.88
CHPT1-208ENST00000552215 GMPSP49915 693 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms